AMBER Archive (2005) - Jul 2005 By DateMost recent messages
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Starting: Fri Jul 01 2005 - 00:52:15 CDT
Ending: Sun Jul 31 2005 - 23:55:46 CDT
- AMBER: question about leaprc.gaff and xxx.top Vijay Manickam Achari (Fri Jul 01 2005 - 00:52:15 CDT)
- AMBER: how to make cluster files? Ananda Rama Krishnan Selvaraj (Fri Jul 01 2005 - 02:10:05 CDT)
- AMBER: Stacking energy Angelo Pugliese (Fri Jul 01 2005 - 03:32:34 CDT)
- Re: AMBER: Stacking energy ivan_at_mmb.pcb.ub.es (Fri Jul 01 2005 - 03:44:57 CDT)
- AMBER: molecular dynamics simulation of protein containing Mg2+ cation Ye Mei (Fri Jul 01 2005 - 04:33:31 CDT)
- Re: AMBER: Stacking energy Jiri Sponer (Fri Jul 01 2005 - 04:52:45 CDT)
- AMBER: cavity volume Anthony Cruz (Fri Jul 01 2005 - 07:46:24 CDT)
- Re: AMBER: Stacking energy Angelo Pugliese (Fri Jul 01 2005 - 05:42:28 CDT)
- AMBER: Replica exchange Anthony Cruz (Fri Jul 01 2005 - 09:33:46 CDT)
- AMBER: Temperature varible in MMPBSA script JunJun Liu (Fri Jul 01 2005 - 08:59:05 CDT)
- Re: AMBER: Stacking energy Jiri Sponer (Fri Jul 01 2005 - 09:01:24 CDT)
- Re: AMBER: Stacking energy Angelo Pugliese (Fri Jul 01 2005 - 09:38:37 CDT)
- Re: AMBER: Stacking energy Jiri Sponer (Fri Jul 01 2005 - 10:00:03 CDT)
- AMBER: please help us on partial charge calculation of PT complex using RESP peng79_at_email.unc.edu (Fri Jul 01 2005 - 10:10:31 CDT)
- AMBER: questions about topology file Fabien CAILLIEZ (Fri Jul 01 2005 - 10:49:20 CDT)
- Re: AMBER: least square fit of snapshots in md trajectory to a reference frame David A. Case (Fri Jul 01 2005 - 10:51:21 CDT)
- Re: AMBER: parallel error Peter Varnai (Fri Jul 01 2005 - 10:51:18 CDT)
- Re: AMBER: example script for hbond calculation Thomas E. Cheatham, III (Fri Jul 01 2005 - 11:10:07 CDT)
- Re: AMBER: please help us on partial charge calculation of PT complex using RESP FyD (Fri Jul 01 2005 - 11:07:40 CDT)
- Re: AMBER: questions about topology file David A. Case (Fri Jul 01 2005 - 15:24:02 CDT)
- AMBER: (no subject) Varsha Goyal (Fri Jul 01 2005 - 16:46:55 CDT)
- Re: AMBER: (no subject) S.Sundar Raman (Sat Jul 02 2005 - 07:58:59 CDT)
- AMBER: loading DNA-RNA hybrid in xleap cbala_at_igib.res.in (Sat Jul 02 2005 - 10:36:59 CDT)
- Re: AMBER: (no subject) Varsha Goyal (Sat Jul 02 2005 - 11:10:49 CDT)
- Re: AMBER: loading DNA-RNA hybrid in xleap David A. Case (Sat Jul 02 2005 - 12:30:58 CDT)
- AMBER: Question about Lennard-Jones Parameters in Topology file Linda Prengaman (Sat Jul 02 2005 - 13:15:51 CDT)
- Re: AMBER: loading DNA-RNA hybrid in xleap cbala_at_igib.res.in (Sat Jul 02 2005 - 14:57:33 CDT)
- Re: AMBER: loading DNA-RNA hybrid in xleap Ilyas Yildirim (Sun Jul 03 2005 - 06:23:56 CDT)
- AMBER: MM-PBSA-big energies John (Sun Jul 03 2005 - 16:31:56 CDT)
- Re: AMBER: MM-PBSA-big energies Carlos Simmerling (Sun Jul 03 2005 - 17:13:48 CDT)
- Re: AMBER: molecular dynamics simulation of protein containing Mg2+ cation David A. Case (Sun Jul 03 2005 - 18:34:14 CDT)
- AMBER: estimation of interface size Ye Mei (Sun Jul 03 2005 - 21:19:55 CDT)
- AMBER: Problems with parameter lib and prep p黙rameter files Daniel Wetzler (Mon Jul 04 2005 - 04:14:56 CDT)
- Re: AMBER: cavity volume Germ醤 Sciaini (Mon Jul 04 2005 - 05:29:59 CDT)
- Re: AMBER: Question about Lennard-Jones Parameters in Topology file Germ醤 Sciaini (Mon Jul 04 2005 - 05:46:00 CDT)
- Re: AMBER: estimation of interface size Carlos Simmerling (Mon Jul 04 2005 - 06:39:11 CDT)
- AMBER: Loading a macmodel file complex Yogesh Sabnis (Mon Jul 04 2005 - 10:02:49 CDT)
- AMBER: pmemd - bug report Petr Kulhanek (Mon Jul 04 2005 - 11:33:05 CDT)
- Re: AMBER: pmemd - bug report Robert Duke (Mon Jul 04 2005 - 15:30:54 CDT)
- Re: AMBER: pmemd - bug report Robert Duke (Mon Jul 04 2005 - 16:40:18 CDT)
- Re: AMBER: pmemd - bug report Robert Duke (Mon Jul 04 2005 - 22:58:14 CDT)
- Re: AMBER: pmemd - bug report Petr Kulhanek (Tue Jul 05 2005 - 05:31:14 CDT)
- AMBER: nucgen and nukit dthomas_at_chem.uwa.edu.au (Tue Jul 05 2005 - 09:55:44 CDT)
- RE: AMBER: Problems with parameter lib and prep p黙rameter files Ross Walker (Tue Jul 05 2005 - 10:47:22 CDT)
- RE: AMBER: Loading a macmodel file complex Ross Walker (Tue Jul 05 2005 - 10:54:57 CDT)
- Re: AMBER: pmemd - bug report Petr Kulhanek (Tue Jul 05 2005 - 11:29:54 CDT)
- Re: AMBER: nucgen and nukit Bill Ross (Tue Jul 05 2005 - 11:33:04 CDT)
- Re: AMBER: pmemd - bug report Robert Duke (Tue Jul 05 2005 - 11:47:19 CDT)
- Re: AMBER: Question about Lennard-Jones Parameters in Topology file Linda Prengaman (Tue Jul 05 2005 - 12:40:44 CDT)
- Re: AMBER: pmemd - bug report David A. Case (Tue Jul 05 2005 - 12:43:18 CDT)
- Re: AMBER: pmemd - bug report David A. Case (Tue Jul 05 2005 - 12:38:09 CDT)
- AMBER: restart file Harianto Tjong (Tue Jul 05 2005 - 13:49:20 CDT)
- RE: AMBER: restart file Ross Walker (Tue Jul 05 2005 - 14:29:27 CDT)
- Re: AMBER: restart file Carlos Simmerling (Tue Jul 05 2005 - 14:36:43 CDT)
- Re: AMBER: restart file Harianto Tjong (Tue Jul 05 2005 - 15:49:16 CDT)
- RE: AMBER: restart file Ross Walker (Tue Jul 05 2005 - 16:15:49 CDT)
- Re: AMBER: restart file Carlos Simmerling (Tue Jul 05 2005 - 16:22:16 CDT)
- Re: AMBER: 10-12 potential and create atom type David A. Case (Tue Jul 05 2005 - 17:03:09 CDT)
- AMBER: Re: AMBER: Problems with parameter lib and prep p黙rameter files Daniel Wetzler (Wed Jul 06 2005 - 05:40:53 CDT)
- AMBER: DNA strands separate ivan_at_mmb.pcb.ub.es (Wed Jul 06 2005 - 05:39:24 CDT)
- Re: AMBER: DNA strands separate Angelo Pugliese (Wed Jul 06 2005 - 07:46:05 CDT)
- Re: AMBER: DNA strands separate ivan_at_mmb.pcb.ub.es (Wed Jul 06 2005 - 08:40:18 CDT)
- AMBER: how to average the structure along md trajectory Ye Mei (Wed Jul 06 2005 - 08:51:56 CDT)
- Re: AMBER: DNA strands separate Angelo Pugliese (Wed Jul 06 2005 - 09:04:36 CDT)
- Re: AMBER: DNA strands separate ivan_at_mmb.pcb.ub.es (Wed Jul 06 2005 - 09:39:04 CDT)
- AMBER: AMBER on Mac OS X Varsha Goyal (Wed Jul 06 2005 - 09:55:12 CDT)
- Re: AMBER: how to average the structure along md trajectory Angelo Pugliese (Wed Jul 06 2005 - 10:02:48 CDT)
- Re: AMBER: DNA strands separate Angelo Pugliese (Wed Jul 06 2005 - 10:00:00 CDT)
- Re: AMBER: AMBER on Mac OS X David A. Case (Wed Jul 06 2005 - 10:36:08 CDT)
- AMBER: box size in explicit water Lwin, ThuZar (Wed Jul 06 2005 - 11:39:47 CDT)
- Re: AMBER: AMBER on Mac OS X Kara Di Giorgio (Wed Jul 06 2005 - 11:46:11 CDT)
- Re: AMBER: box size in explicit water Melinda Layten (Wed Jul 06 2005 - 11:52:55 CDT)
- Re: AMBER: box size in explicit water David A. Case (Wed Jul 06 2005 - 12:30:59 CDT)
- AMBER: sander problem Anthony Cruz (Wed Jul 06 2005 - 18:05:44 CDT)
- RE: AMBER: sander problem Ross Walker (Wed Jul 06 2005 - 16:19:34 CDT)
- AMBER: problem with addIons Lwin, ThuZar (Wed Jul 06 2005 - 16:41:25 CDT)
- Re: AMBER: problem with addIons David LeBard (Wed Jul 06 2005 - 17:08:35 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Ilyas Yildirim (Wed Jul 06 2005 - 17:24:45 CDT)
- Re: AMBER: sander problem David A. Case (Wed Jul 06 2005 - 17:30:59 CDT)
- Re: AMBER: problem with addIons David A. Case (Wed Jul 06 2005 - 17:41:21 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Ilyas Yildirim (Wed Jul 06 2005 - 22:18:46 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Qing Zhang (Thu Jul 07 2005 - 03:30:14 CDT)
- AMBER: question about sander minimization error drugdesign (Thu Jul 07 2005 - 03:37:51 CDT)
- Re: AMBER: question about sander minimization error Ilyas Yildirim (Thu Jul 07 2005 - 03:59:13 CDT)
- Re: AMBER: sander problem Anthony Cruz (Thu Jul 07 2005 - 10:25:29 CDT)
- Re: AMBER: Replica Exchange Carlos Simmerling (Thu Jul 07 2005 - 08:43:17 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends FyD (Thu Jul 07 2005 - 10:54:00 CDT)
- AMBER: tyrosyl charges Ozlem Demir (Thu Jul 07 2005 - 12:07:24 CDT)
- AMBER: Release of R.E.D-II FyD (Thu Jul 07 2005 - 12:58:54 CDT)
- AMBER: problems with bonds in sander Fabien CAILLIEZ (Thu Jul 07 2005 - 13:18:19 CDT)
- AMBER: how is truncated octahedron box calculated Lwin, ThuZar (Thu Jul 07 2005 - 15:38:05 CDT)
- Re: AMBER: how is truncated octahedron box calculated Chris Moth (Thu Jul 07 2005 - 16:50:24 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Ilyas Yildirim (Thu Jul 07 2005 - 16:56:14 CDT)
- Re: AMBER: tyrosyl charges Ilyas Yildirim (Thu Jul 07 2005 - 17:30:20 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Qing Zhang (Thu Jul 07 2005 - 19:48:40 CDT)
- AMBER: building nucleic acids mathew k varghese (Thu Jul 07 2005 - 23:07:03 CDT)
- AMBER: Problem with building AMBER7 on SUSE Linux 9.2 Daniel Wetzler (Fri Jul 08 2005 - 06:18:09 CDT)
- Re: AMBER: building nucleic acids Bill Ross (Fri Jul 08 2005 - 14:05:15 CDT)
- AMBER: LCPO SASA parameters for other elements when using gbsa=1 option David.Maxwell_at_di.mdacc.tmc.edu (Fri Jul 08 2005 - 15:10:00 CDT)
- AMBER: infinite DNA Stern, Julie (Fri Jul 08 2005 - 16:44:25 CDT)
- Re: AMBER: infinite DNA Carlos Simmerling (Fri Jul 08 2005 - 18:33:59 CDT)
- AMBER: Water simulation David LeBard (Fri Jul 08 2005 - 18:44:12 CDT)
- Re: AMBER: Water simulation David A. Case (Fri Jul 08 2005 - 19:13:37 CDT)
- Re: AMBER: infinite DNA David A. Case (Fri Jul 08 2005 - 19:26:04 CDT)
- Re: AMBER: building nucleic acids mathew k varghese (Sat Jul 09 2005 - 00:55:00 CDT)
- AMBER: glc0358_at_vip.sina.com (Sat Jul 09 2005 - 01:22:45 CDT)
- AMBER: simulation with Mg2+ ions and counter ions Ye Mei (Sat Jul 09 2005 - 01:54:16 CDT)
- AMBER: glc0358_at_vip.sina.com (Sat Jul 09 2005 - 02:03:23 CDT)
- Re: AMBER: simulation with Mg2+ ions and counter ions Lihua Wang (Sat Jul 09 2005 - 03:11:42 CDT)
- Re: AMBER: Zhiguo Liu (Sat Jul 09 2005 - 03:39:43 CDT)
- Re: AMBER: simulation with Mg2+ ions and counter ions Jiri Sponer (Sat Jul 09 2005 - 03:50:10 CDT)
- RE: Re: AMBER: glc0358_at_vip.sina.com (Sat Jul 09 2005 - 05:37:54 CDT)
- AMBER: Position Restraints! Karthikeyan Pasupathy (Sat Jul 09 2005 - 12:24:51 CDT)
- AMBER: how to see the box lines Ananda Rama Krishnan Selvaraj (Sat Jul 09 2005 - 13:10:50 CDT)
- RE: Re: AMBER: Shan Jufang (Sat Jul 09 2005 - 14:37:54 CDT)
- Re: AMBER: Position Restraints! justin litchfield (Sat Jul 09 2005 - 19:08:15 CDT)
- Re: AMBER: Water simulation David LeBard (Sat Jul 09 2005 - 19:30:55 CDT)
- AMBER: molecular dynamics Vijay Manickam Achari (Sat Jul 09 2005 - 21:55:55 CDT)
- RE: AMBER: molecular dynamics Ross Walker (Sat Jul 09 2005 - 22:42:06 CDT)
- Re: AMBER: molecular dynamics course Ilan Samish (Sun Jul 10 2005 - 01:23:05 CDT)
- Re: RE: Re: AMBER: Zhiguo Liu (Sun Jul 10 2005 - 02:37:36 CDT)
- AMBER: Leap compilation issues justin litchfield (Sun Jul 10 2005 - 20:41:50 CDT)
- Re: AMBER: Leap compilation issues Bill Ross (Sun Jul 10 2005 - 21:11:43 CDT)
- Re: AMBER: building nucleic acids David A. Case (Sun Jul 10 2005 - 23:51:46 CDT)
- Re: AMBER: Leap compilation issues David A. Case (Mon Jul 11 2005 - 00:13:04 CDT)
- Re: AMBER: Leap compilation issues justin litchfield (Mon Jul 11 2005 - 01:49:33 CDT)
- Re: AMBER: Leap compilation issues Andreas Svrcek-Seiler (Mon Jul 11 2005 - 05:43:39 CDT)
- AMBER: Critical PMEMD 8 Bugfix Robert Duke (Mon Jul 11 2005 - 07:38:59 CDT)
- AMBER: Question about "nmanal" Yen-Ting Lai (Mon Jul 11 2005 - 09:11:25 CDT)
- AMBER: MM_PBSA help, please opitz_at_che.udel.edu (Mon Jul 11 2005 - 10:55:47 CDT)
- Re: AMBER: Question about "nmanal" David A. Case (Mon Jul 11 2005 - 11:15:32 CDT)
- RE: AMBER: Leap compilation issues Ross Walker (Mon Jul 11 2005 - 12:05:25 CDT)
- Re: AMBER: MM_PBSA help, please Scott Pendley (Mon Jul 11 2005 - 13:30:34 CDT)
- Re: AMBER: MM_PBSA help, please opitz_at_che.udel.edu (Mon Jul 11 2005 - 16:15:19 CDT)
- Re: AMBER: MM_PBSA help, please Scott Pendley (Mon Jul 11 2005 - 16:37:50 CDT)
- AMBER: Ptraj and order of operations Furse, Kristina Elisabet (Mon Jul 11 2005 - 19:26:09 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Ilyas Yildirim (Mon Jul 11 2005 - 20:25:00 CDT)
- Re: AMBER: Leap compilation issues justin litchfield (Mon Jul 11 2005 - 20:25:10 CDT)
- Re: AMBER: Leap compilation issues Bill Ross (Mon Jul 11 2005 - 20:34:35 CDT)
- Re: AMBER: Leap compilation issues justin litchfield (Mon Jul 11 2005 - 20:55:54 CDT)
- AMBER: MD simulation on a protein solvated by a combination of some water models ? B $BIp;V (Mon Jul 11 2005 - 23:10:12 CDT)
- AMBER: doubt on the value of Pressure on MD run Ananda Rama Krishnan Selvaraj (Tue Jul 12 2005 - 03:21:07 CDT)
- AMBER: Anal - problems with energy analysis Yogesh Sabnis (Tue Jul 12 2005 - 03:33:30 CDT)
- Re: AMBER: Problem with building AMBER7 on SUSE Linux 9.2 Daniel Wetzler (Tue Jul 12 2005 - 02:53:40 CDT)
- Re: AMBER: Question about "nmanal" Yen-Ting Lai (Tue Jul 12 2005 - 05:09:24 CDT)
- Re: AMBER: doubt on the value of Pressure on MD run Carlos Simmerling (Tue Jul 12 2005 - 06:07:08 CDT)
- Re: AMBER: Question about "nmanal" Yen-Ting Lai (Tue Jul 12 2005 - 08:36:25 CDT)
- AMBER: molsurf error in MM/PBSA calculation JunJun Liu (Tue Jul 12 2005 - 08:43:55 CDT)
- Re: AMBER: MM_PBSA help, please opitz_at_che.udel.edu (Tue Jul 12 2005 - 09:19:05 CDT)
- Re: AMBER: Question about "nmanal" David A. Case (Tue Jul 12 2005 - 11:29:46 CDT)
- Re: AMBER: MM_PBSA help, please David A. Case (Tue Jul 12 2005 - 11:34:56 CDT)
- RE: AMBER: Leap compilation issues Ross Walker (Tue Jul 12 2005 - 11:47:05 CDT)
- RE: AMBER: MD simulation on a protein solvated by a combination of some water models ? Ross Walker (Tue Jul 12 2005 - 11:41:44 CDT)
- Re: AMBER: MM_PBSA help, please opitz_at_che.udel.edu (Tue Jul 12 2005 - 12:29:19 CDT)
- AMBER: TI - frcmod file Oliver Hucke (Tue Jul 12 2005 - 14:21:44 CDT)
- Re: AMBER: RESP charges of RNA nucleotides with 3' and 5' ends Qing Zhang (Tue Jul 12 2005 - 14:59:01 CDT)
- AMBER: question replica exchange acceptance ratio Zhuang (Tue Jul 12 2005 - 16:01:19 CDT)
- Re: AMBER: question replica exchange acceptance ratio Carlos Simmerling (Tue Jul 12 2005 - 16:42:55 CDT)
- Re: AMBER: MM_PBSA help, please Scott Pendley (Tue Jul 12 2005 - 16:57:08 CDT)
- Re: AMBER: Anal - problems with energy analysis David A. Case (Tue Jul 12 2005 - 17:00:45 CDT)
- Re: AMBER: molsurf error in MM/PBSA calculation David A. Case (Tue Jul 12 2005 - 17:03:23 CDT)
- Re: AMBER: TI - frcmod file Ilyas Yildirim (Tue Jul 12 2005 - 17:06:53 CDT)
- Re: AMBER: MM_PBSA help, please opitz_at_che.udel.edu (Tue Jul 12 2005 - 17:18:50 CDT)
- AMBER: Comparison of AMBER against DL-POLY Devashish Kumar (Tue Jul 12 2005 - 17:32:03 CDT)
- Re: AMBER: question replica exchange acceptance ratio Zhuang (Tue Jul 12 2005 - 17:39:47 CDT)
- Re: AMBER: Ptraj and order of operations Scott Pendley (Tue Jul 12 2005 - 18:22:29 CDT)
- Re: AMBER: question replica exchange acceptance ratio Carlos Simmerling (Tue Jul 12 2005 - 18:43:01 CDT)
- Re: AMBER: TI - frcmod file Oliver Hucke (Tue Jul 12 2005 - 18:54:11 CDT)
- Re: AMBER: Ptraj and order of operations Furse, Kristina Elisabet (Tue Jul 12 2005 - 20:07:04 CDT)
- Re: AMBER: molsurf error in MM/PBSA calculation David A. Case (Tue Jul 12 2005 - 20:23:50 CDT)
- Re: AMBER: Ptraj and order of operations Petr Kulhanek (Wed Jul 13 2005 - 02:21:48 CDT)
- FW: AMBER: TI - frcmod file Douali, Latifa (Wed Jul 13 2005 - 10:38:25 CDT)
- AMBER: Amber 8: create topology for solvent - PBC box size problem Angela Liu (Wed Jul 13 2005 - 13:41:04 CDT)
- AMBER: Amber 8: heterogeneous multiple copy LES method Angela Liu (Wed Jul 13 2005 - 13:47:08 CDT)
- Re: AMBER: Ptraj and order of operations Furse, Kristina Elisabet (Wed Jul 13 2005 - 13:55:02 CDT)
- Re: AMBER: TI - frcmod file Ilyas Yildirim (Wed Jul 13 2005 - 15:42:49 CDT)
- Re: FW: AMBER: TI - frcmod file Ilyas Yildirim (Wed Jul 13 2005 - 15:51:00 CDT)
- RE: AMBER: TI - frcmod file Rhoad, Jonathan S. (Wed Jul 13 2005 - 16:03:17 CDT)
- AMBER: pdb files from traj file YoungJin Cho (Wed Jul 13 2005 - 16:06:30 CDT)
- Re: AMBER: TI - frcmod file David A. Case (Wed Jul 13 2005 - 16:10:56 CDT)
- Re: AMBER: pdb files from traj file Carlos Simmerling (Wed Jul 13 2005 - 16:16:52 CDT)
- Re: AMBER: TI - frcmod file Oliver Hucke (Wed Jul 13 2005 - 16:18:08 CDT)
- RE: AMBER: pdb files from traj file Rhoad, Jonathan S. (Wed Jul 13 2005 - 16:22:56 CDT)
- Re: AMBER: pdb files from traj file David LeBard (Wed Jul 13 2005 - 16:30:07 CDT)
- Re: AMBER: TI - frcmod file Ilyas Yildirim (Wed Jul 13 2005 - 16:32:41 CDT)
- RE: AMBER: pdb files from traj file Ross Walker (Wed Jul 13 2005 - 16:37:05 CDT)
- AMBER: lib file for nonstandard residue Eric Hu (Wed Jul 13 2005 - 18:52:19 CDT)
- AMBER: units of mwcovar matrix befor conversion Kateryna Miroshnychenko (Thu Jul 14 2005 - 03:18:28 CDT)
- Re:AMBER: MD simulation on a protein solvated by a combination of some water mod B $BIp;V (Thu Jul 14 2005 - 04:56:39 CDT)
- AMBER: Modeling of a radical L Jin (Thu Jul 14 2005 - 05:46:20 CDT)
- AMBER: Apologies - LMOD website down Istvan Kolossvary (Thu Jul 14 2005 - 09:39:54 CDT)
- AMBER: Leap question Kara Di Giorgio (Thu Jul 14 2005 - 10:10:12 CDT)
- Re: AMBER: MD simulation on a protein solvated by a combination of some water mod David A. Case (Thu Jul 14 2005 - 10:29:20 CDT)
- Re: AMBER: Leap question David A. Case (Thu Jul 14 2005 - 10:39:59 CDT)
- Re: AMBER: Modeling of a radical David A. Case (Thu Jul 14 2005 - 10:48:54 CDT)
- Re: AMBER: lib file for nonstandard residue Bill Ross (Thu Jul 14 2005 - 14:08:03 CDT)
- Re: AMBER: lib file for nonstandard residue Bill Ross (Thu Jul 14 2005 - 14:37:01 CDT)
- Re: AMBER: Amber 8: heterogeneous multiple copy LES method Carlos Simmerling (Thu Jul 14 2005 - 16:17:07 CDT)
- Re: AMBER: lib file for nonstandard residue Eric Hu (Thu Jul 14 2005 - 17:02:35 CDT)
- Re: AMBER: lib file for nonstandard residue Bill Ross (Thu Jul 14 2005 - 17:20:25 CDT)
- Re: AMBER: lib file for nonstandard residue David A. Case (Thu Jul 14 2005 - 17:35:47 CDT)
- RE: AMBER: molsurf error in MM/PBSA calculation Paul Beroza (Thu Jul 14 2005 - 18:01:08 CDT)
- AMBER: Leap problem Kara Di Giorgio (Thu Jul 14 2005 - 19:06:50 CDT)
- Re: AMBER: Leap problem Furse, Kristina Elisabet (Thu Jul 14 2005 - 19:31:40 CDT)
- Re: AMBER: Leap problem Kara Di Giorgio (Thu Jul 14 2005 - 20:19:00 CDT)
- Re: AMBER: Leap problem Oliver Hucke (Thu Jul 14 2005 - 20:48:52 CDT)
- AMBER: Can GB and MS work correctly together in mmpbsa? zhli_2000_at_126.com (Thu Jul 14 2005 - 21:38:08 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? Holger Gohlke (Fri Jul 15 2005 - 00:39:21 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? zhli_2000_at_126.com (Fri Jul 15 2005 - 02:10:41 CDT)
- AMBER: Energy decomposition parameters Angelo Pugliese (Fri Jul 15 2005 - 03:57:21 CDT)
- Re: AMBER: Leap problem Kara Di Giorgio (Fri Jul 15 2005 - 08:59:47 CDT)
- Re: AMBER: Amber 8: heterogeneous multiple copy LES method Angela Liu (Fri Jul 15 2005 - 09:16:23 CDT)
- AMBER: P4 EM64T Intel Fortran Compile Problem Dawei Zhang (Fri Jul 15 2005 - 12:04:49 CDT)
- RE: AMBER: P4 EM64T Intel Fortran Compile Problem Ross Walker (Fri Jul 15 2005 - 12:26:36 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? Scott Pendley (Fri Jul 15 2005 - 12:46:46 CDT)
- Re: AMBER: P4 EM64T Intel Fortran Compile Problem Andreas Svrcek-Seiler (Fri Jul 15 2005 - 12:49:47 CDT)
- AMBER: Re: Problems with ptraj/rdparm Thomas E. Cheatham, III (Fri Jul 15 2005 - 14:22:28 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? Scott Pendley (Fri Jul 15 2005 - 15:08:43 CDT)
- Re: AMBER: P4 EM64T Intel Fortran Compile Problem Dawei Zhang (Fri Jul 15 2005 - 15:54:39 CDT)
- AMBER: problem with protein ligand complex Claire Zerafa (Sat Jul 16 2005 - 11:31:56 CDT)
- Re: AMBER: problem with protein ligand complex David A. Case (Sat Jul 16 2005 - 14:05:02 CDT)
- AMBER: random-coil polymer Varsha Goyal (Sat Jul 16 2005 - 17:35:19 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? zhli_2000_at_126.com (Sat Jul 16 2005 - 22:30:47 CDT)
- AMBER: AMBER-process_mdout.perl Praveena Gopal (Mon Jul 18 2005 - 02:26:19 CDT)
- Re: AMBER: AMBER-process_mdout.perl julien (Mon Jul 18 2005 - 02:48:01 CDT)
- AMBER: PMF calculations with TI using the sander Vitor Manuel Sousa F?x (Mon Jul 18 2005 - 02:30:59 CDT)
- Re: AMBER: AMBER-process_mdout.perl mathew k varghese (Mon Jul 18 2005 - 06:22:56 CDT)
- AMBER: cap simulations questions Fabien CAILLIEZ (Mon Jul 18 2005 - 09:50:32 CDT)
- RE: AMBER: AMBER-process_mdout.perl Ross Walker (Mon Jul 18 2005 - 10:24:18 CDT)
- Re: AMBER: cap simulations questions David A. Case (Mon Jul 18 2005 - 11:01:34 CDT)
- Re: AMBER: PMF calculations with TI using the sander David A. Case (Mon Jul 18 2005 - 11:03:47 CDT)
- AMBER: segmentation fault in radial ptraj Kateryna Miroshnychenko (Mon Jul 18 2005 - 11:55:08 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? Scott Pendley (Mon Jul 18 2005 - 12:31:29 CDT)
- AMBER: Using Antechamber with Gamess and other molecular manipulations Charles Karney (Mon Jul 18 2005 - 12:28:20 CDT)
- Re: AMBER: Can GB and MS work correctly together in mmpbsa? Alfonso Garcia-Sosa (Mon Jul 18 2005 - 14:16:21 CDT)
- AMBER: Re: (瑞星提示-此邮件可能是垃圾邮件)Re: AMBER: Can GB and MS work correctly together in mmpbsa? zhli_2000_at_126.com (Mon Jul 18 2005 - 20:23:39 CDT)
- AMBER: comparing md trajectories ayongye_at_chem.uga.edu (Mon Jul 18 2005 - 20:12:15 CDT)
- AMBER: Re: (瑞星提示-此邮件可能是垃圾邮件)Re: AMBER: Can GB and MS work correctly together in mmpbsa? zhli_2000_at_126.com (Mon Jul 18 2005 - 20:09:23 CDT)
- AMBER: pdb file and xleap Wai Keat Yam (Tue Jul 19 2005 - 05:06:50 CDT)
- AMBER: mm_pbsa question Matthew Davies (Tue Jul 19 2005 - 05:07:51 CDT)
- AMBER: Amber 7 Compiler Error Stephen P. Molnar, Ph.D. (Tue Jul 19 2005 - 07:26:14 CDT)
- Re: AMBER: comparing md trajectories Carlos Simmerling (Tue Jul 19 2005 - 07:58:44 CDT)
- RE: AMBER: Amber 7 Compiler Error Ross Walker (Tue Jul 19 2005 - 10:36:03 CDT)
- RE: AMBER: pdb file and xleap Ross Walker (Tue Jul 19 2005 - 10:33:44 CDT)
- AMBER: Compiling Amber7 wint Intel Fortran v8 Compiler Stephen P. Molnar, Ph.D. (Tue Jul 19 2005 - 15:14:30 CDT)
- AMBER: Trouble with Amber8 Dustin (Tue Jul 19 2005 - 15:16:10 CDT)
- RE: AMBER: Trouble with Amber8 Ross Walker (Tue Jul 19 2005 - 15:41:27 CDT)
- AMBER: cap and ptraj Fabien CAILLIEZ (Tue Jul 19 2005 - 17:14:50 CDT)
- AMBER: FW: Andrew Box (Tue Jul 19 2005 - 21:07:44 CDT)
- Re: AMBER: FW: David A. Case (Tue Jul 19 2005 - 21:46:48 CDT)
- Re: AMBER: Amber 7 Compiler Error Daniel Wetzler (Wed Jul 20 2005 - 04:38:25 CDT)
- AMBER: P4 EM64T Intel Fortran Compile Problem Zhang Bing (Wed Jul 20 2005 - 21:24:20 CDT)
- RE: AMBER: pdb file and xleap Wai Keat Yam (Thu Jul 21 2005 - 01:01:07 CDT)
- AMBER: Atom type :Si Ananda Rama Krishnan Selvaraj (Thu Jul 21 2005 - 14:02:23 CDT)
- AMBER: [OT] A nab programming question M. L. Dodson (Thu Jul 21 2005 - 15:07:09 CDT)
- AMBER: Question about Prep file opitz_at_che.udel.edu (Thu Jul 21 2005 - 15:52:41 CDT)
- AMBER: Carbonane Kara Di Giorgio (Thu Jul 21 2005 - 19:55:26 CDT)
- AMBER: Error in MD mathew k varghese (Thu Jul 21 2005 - 22:53:08 CDT)
- Re: AMBER: Error in MD Guanglei Cui (Thu Jul 21 2005 - 23:08:56 CDT)
- Re: AMBER: Question about Prep file Marc Baaden (Fri Jul 22 2005 - 01:38:42 CDT)
- AMBER: Lipid bilayer parameters nag raj (Fri Jul 22 2005 - 02:18:24 CDT)
- AMBER: An atom name with 4 characters is not compatible with Leap ? Arnoult, Eric [PRDFR] (Fri Jul 22 2005 - 02:53:24 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? ivan_at_mmb.pcb.ub.es (Fri Jul 22 2005 - 03:16:52 CDT)
- Re: AMBER: Atom type :Si Stefano.Pieraccini_at_unimi.it (Fri Jul 22 2005 - 03:37:50 CDT)
- AMBER: problem with xleap Alessio Coi (Fri Jul 22 2005 - 08:47:23 CDT)
- AMBER: SHAKE error Agata Jurkiewicz (Fri Jul 22 2005 - 09:09:34 CDT)
- Re: AMBER: SHAKE error Carlos Simmerling (Fri Jul 22 2005 - 09:56:53 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? Tim Meyer (Fri Jul 22 2005 - 10:06:52 CDT)
- Re: AMBER: problem with xleap David A. Case (Fri Jul 22 2005 - 10:59:24 CDT)
- Re: AMBER: SHAKE error David A. Case (Fri Jul 22 2005 - 11:04:15 CDT)
- Re: AMBER: SHAKE error Agata Jurkiewicz (Fri Jul 22 2005 - 12:01:16 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? David A. Case (Fri Jul 22 2005 - 12:27:31 CDT)
- Re: AMBER: SHAKE error Carlos Simmerling (Fri Jul 22 2005 - 12:24:46 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? David A. Case (Fri Jul 22 2005 - 12:24:58 CDT)
- Re: AMBER: a bimolecular reaction Yong Duan (Fri Jul 22 2005 - 12:44:23 CDT)
- Re: AMBER: Question about Prep file David A. Case (Fri Jul 22 2005 - 13:34:57 CDT)
- Re: AMBER: SHAKE error Agata Jurkiewicz (Fri Jul 22 2005 - 14:12:10 CDT)
- Re: AMBER: Question about Prep file opitz_at_che.udel.edu (Fri Jul 22 2005 - 14:21:20 CDT)
- Re: AMBER: SHAKE error Ilyas Yildirim (Fri Jul 22 2005 - 14:23:06 CDT)
- RE: AMBER: a bimolecular reaction Yong Duan (Fri Jul 22 2005 - 14:25:09 CDT)
- Re: AMBER: SHAKE error Carlos Simmerling (Fri Jul 22 2005 - 14:26:36 CDT)
- Re: AMBER: Atom type :Si Ananda Rama Krishnan Selvaraj (Fri Jul 22 2005 - 14:45:30 CDT)
- Re: AMBER: SHAKE error David A. Case (Fri Jul 22 2005 - 15:46:42 CDT)
- Re: AMBER: SHAKE error Agata Jurkiewicz (Fri Jul 22 2005 - 17:06:49 CDT)
- AMBER: nucgen bdna types Stern, Julie (Fri Jul 22 2005 - 20:01:20 CDT)
- AMBER: mmpbsa test problem Suxin Zheng (Fri Jul 22 2005 - 20:41:11 CDT)
- AMBER: Lipid bilayer parameters and charmm force field parameters nag raj (Fri Jul 22 2005 - 22:15:35 CDT)
- Re: AMBER: Modeling of a radical Peter Gannett (Sat Jul 23 2005 - 09:21:25 CDT)
- Re: AMBER: nucgen bdna types David A. Case (Sun Jul 24 2005 - 18:42:44 CDT)
- AMBER: Adding residues to a DNA sequence Kara Di Giorgio (Sun Jul 24 2005 - 20:50:45 CDT)
- AMBER: fit Yong Xu (Mon Jul 25 2005 - 04:04:57 CDT)
- Re: AMBER: fit Kateryna Miroshnychenko (Mon Jul 25 2005 - 05:11:11 CDT)
- AMBER: NTWPRY problem wenfei Li (Mon Jul 25 2005 - 10:44:31 CDT)
- AMBER: ptraj-acceptor mask format Peter Gannett (Mon Jul 25 2005 - 14:10:47 CDT)
- AMBER: antechamber Dustin (Mon Jul 25 2005 - 15:30:40 CDT)
- Re: AMBER: [OT] A nab programming question David A. Case (Mon Jul 25 2005 - 16:35:49 CDT)
- Re: AMBER: Adding residues to a DNA sequence David A. Case (Mon Jul 25 2005 - 16:39:23 CDT)
- Re: AMBER: antechamber David A. Case (Mon Jul 25 2005 - 18:42:32 CDT)
- Re: AMBER: NTWPRY problem David A. Case (Mon Jul 25 2005 - 18:54:25 CDT)
- Re: AMBER: SHAKE error David A. Case (Mon Jul 25 2005 - 18:57:02 CDT)
- Re: AMBER: NTWPRY problem wenfei Li (Mon Jul 25 2005 - 20:39:21 CDT)
- Re: AMBER: NTWPRY problem wenfei Li (Mon Jul 25 2005 - 20:42:16 CDT)
- Re: AMBER: NTWPRY problem wenfei Li (Mon Jul 25 2005 - 20:51:09 CDT)
- AMBER: nucgen H5T H3T Stern, Julie (Mon Jul 25 2005 - 20:55:52 CDT)
- Re: AMBER: Adding residues to a DNA sequence Kara Di Giorgio (Mon Jul 25 2005 - 21:20:53 CDT)
- AMBER: potential of mean force calculation along reaction coordinates Ye Mei (Tue Jul 26 2005 - 02:04:00 CDT)
- AMBER: Lipid parameters nag raj (Tue Jul 26 2005 - 05:55:22 CDT)
- AMBER: Periodic box imaging using ptraj Grzegorz Jezierski (Tue Jul 26 2005 - 08:25:53 CDT)
- Re: AMBER: [OT] A nab programming question M. L. Dodson (Tue Jul 26 2005 - 09:32:47 CDT)
- Re: AMBER: nucgen H5T H3T David A. Case (Tue Jul 26 2005 - 09:54:32 CDT)
- AMBER: why not minimize snapshots before MM/PBSA calculations JunJun Liu (Tue Jul 26 2005 - 10:02:00 CDT)
- RE: AMBER: Tutoial 8 (Case Study) Ross Walker (Tue Jul 26 2005 - 12:03:37 CDT)
- AMBER: Thermodynamic Integration for conformational changes? Grzegorz Jezierski (Tue Jul 26 2005 - 12:33:00 CDT)
- Re: AMBER: Thermodynamic Integration for conformational changes? Carlos Simmerling (Tue Jul 26 2005 - 13:02:57 CDT)
- Re: AMBER: Thermodynamic Integration for conformational changes? David A. Case (Tue Jul 26 2005 - 13:42:54 CDT)
- Re: AMBER: ptraj-acceptor mask format Thomas E. Cheatham, III (Tue Jul 26 2005 - 15:06:08 CDT)
- Re: AMBER: Periodic box imaging using ptraj Thomas E. Cheatham, III (Tue Jul 26 2005 - 15:11:39 CDT)
- AMBER: new residue Douali, Latifa (Tue Jul 26 2005 - 19:50:51 CDT)
- Re: AMBER: new residue Furse, Kristina Elisabet (Tue Jul 26 2005 - 20:40:51 CDT)
- RE: AMBER: why not minimize snapshots before MM/PBSA calculations Arnoult, Eric [PRDFR] (Wed Jul 27 2005 - 02:21:30 CDT)
- RE: AMBER: An atom name with 4 characters is not compatible with Leap ? Arnoult, Eric [PRDFR] (Wed Jul 27 2005 - 02:20:27 CDT)
- AMBER: cutoff in ANAL Madjid Taghdir (Wed Jul 27 2005 - 03:06:54 CDT)
- AMBER: prepi format and question about it Ilyas Yildirim (Wed Jul 27 2005 - 04:20:00 CDT)
- Re: AMBER: Periodic box imaging using ptraj Grzegorz Jezierski (Wed Jul 27 2005 - 04:27:24 CDT)
- Re: AMBER: Periodic box imaging using ptraj Grzegorz Jezierski (Wed Jul 27 2005 - 06:28:29 CDT)
- AMBER: Protein residue numbering Sukjoon Yoon (Wed Jul 27 2005 - 06:52:42 CDT)
- Re: Re: AMBER: how to reduce box size and delete excess solvent hj zou (Wed Jul 27 2005 - 08:36:40 CDT)
- Re: AMBER: prepi format and question about it David A. Case (Wed Jul 27 2005 - 09:57:30 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? David A. Case (Wed Jul 27 2005 - 10:08:11 CDT)
- AMBER: [FWD] water minimalization problems blakrose_at_gazeta.pl (Wed Jul 27 2005 - 10:46:47 CDT)
- RE: AMBER: An atom name with 4 characters is not compatible with Leap ? Arnoult, Eric [PRDFR] (Wed Jul 27 2005 - 10:59:43 CDT)
- RE: AMBER: new residue Douali, Latifa (Wed Jul 27 2005 - 11:09:01 CDT)
- RE: AMBER: Periodic box imaging using ptraj Ross Walker (Wed Jul 27 2005 - 11:28:05 CDT)
- RE: AMBER: new residue Ross Walker (Wed Jul 27 2005 - 11:54:14 CDT)
- AMBER: How to insert a protein in lipid bilayer nag raj (Wed Jul 27 2005 - 11:56:07 CDT)
- Re: AMBER: new residue David A. Case (Wed Jul 27 2005 - 12:20:42 CDT)
- Re: AMBER: An atom name with 4 characters is not compatible with Leap ? David A. Case (Wed Jul 27 2005 - 12:39:08 CDT)
- AMBER: pbsa problem Suxin Zheng (Wed Jul 27 2005 - 14:47:29 CDT)
- RE: AMBER: new residue Douali, Latifa (Wed Jul 27 2005 - 15:45:17 CDT)
- Re: AMBER: ptraj-acceptor mask format Peter Gannett (Wed Jul 27 2005 - 15:54:50 CDT)
- AMBER: convert_trajectory Wei Chen (Wed Jul 27 2005 - 15:58:36 CDT)
- Re: AMBER: new residue David A. Case (Wed Jul 27 2005 - 16:13:32 CDT)
- Re: AMBER: Adding residues to a DNA sequence David A. Case (Wed Jul 27 2005 - 16:31:16 CDT)
- Re: AMBER: convert_trajectory Thomas E. Cheatham, III (Wed Jul 27 2005 - 16:27:57 CDT)
- RE: AMBER: new residue Douali, Latifa (Wed Jul 27 2005 - 16:36:27 CDT)
- Re: AMBER: convert_trajectory Wei Chen (Wed Jul 27 2005 - 18:07:55 CDT)
- Re: AMBER: convert_trajectory Thomas E. Cheatham, III (Wed Jul 27 2005 - 18:45:34 CDT)
- Re: AMBER: How to insert a protein in lipid bilayer Yong Xu (Wed Jul 27 2005 - 20:47:22 CDT)
- Re: AMBER: convert_trajectory Wei Chen (Wed Jul 27 2005 - 21:06:28 CDT)
- AMBER: Minimized structure Yam (Wed Jul 27 2005 - 22:02:03 CDT)
- AMBER: nucgen error (U not generated) mathew k varghese (Wed Jul 27 2005 - 22:28:51 CDT)
- Re: AMBER: Minimized structure Thomas E. Cheatham, III (Wed Jul 27 2005 - 22:47:28 CDT)
- Re: AMBER: nucgen error (U not generated) Thomas E. Cheatham, III (Wed Jul 27 2005 - 22:49:33 CDT)
- Re: AMBER: prepi format and question about it Ilyas Yildirim (Thu Jul 28 2005 - 00:10:36 CDT)
- RE: Re: AMBER: Minimized structure Linchen Gong (Thu Jul 28 2005 - 01:55:05 CDT)
- Re: AMBER: Minimized structure Carlos Simmerling (Thu Jul 28 2005 - 05:53:45 CDT)
- Re: AMBER: Minimized structure Vitor Manuel Sousa F?x (Thu Jul 28 2005 - 06:07:09 CDT)
- AMBER: dihedral term in prmtop file Ye Mei (Thu Jul 28 2005 - 09:38:55 CDT)
- AMBER: Division by zero in sander Caleb S Howe (cshowe_at_Princeton.EDU) (Thu Jul 28 2005 - 09:57:00 CDT)
- Re: AMBER: dihedral term in prmtop file Carlos Simmerling (Thu Jul 28 2005 - 09:59:36 CDT)
- AMBER: Fatal Error on loading a pdb in xLeap Kara Di Giorgio (Thu Jul 28 2005 - 10:10:45 CDT)
- Re: AMBER: cutoff in ANAL David A. Case (Thu Jul 28 2005 - 11:26:40 CDT)
- Re: AMBER: Fatal Error on loading a pdb in xLeap David A. Case (Thu Jul 28 2005 - 17:17:14 CDT)
- Re: AMBER: Minimized structure Yam (Thu Jul 28 2005 - 21:25:29 CDT)
- Re: AMBER: Minimized structure Thomas E. Cheatham, III (Thu Jul 28 2005 - 22:09:55 CDT)
- Re: AMBER: Fatal Error on loading a pdb in xLeap Ilyas Yildirim (Thu Jul 28 2005 - 22:56:32 CDT)
- Re: AMBER: Minimized structure Yam (Thu Jul 28 2005 - 23:03:40 CDT)
- AMBER: ambpdb core dump Peter Gannett (Fri Jul 29 2005 - 06:27:46 CDT)
- Re: AMBER: ambpdb core dump David A. Case (Fri Jul 29 2005 - 09:40:03 CDT)
- Re: AMBER: ambpdb core dump David A. Case (Fri Jul 29 2005 - 09:56:42 CDT)
- AMBER: ptraj output missing opitz_at_che.udel.edu (Fri Jul 29 2005 - 10:05:19 CDT)
- Re: AMBER: Adding residues to a DNA sequence Kara Di Giorgio (Fri Jul 29 2005 - 11:39:43 CDT)
- AMBER: temperature keep increasing in high temp. Hwankyu Lee (Fri Jul 29 2005 - 16:27:04 CDT)
- AMBER: mm_pbsa Wei Chen (Fri Jul 29 2005 - 19:10:46 CDT)
- Re: AMBER: temperature keep increasing in high temp. Carlos Simmerling (Fri Jul 29 2005 - 19:28:42 CDT)
- Re: AMBER: mm_pbsa Suxin Zheng (Fri Jul 29 2005 - 19:39:15 CDT)
- Re: AMBER: mm_pbsa Wei Chen (Fri Jul 29 2005 - 19:55:07 CDT)
- Re: AMBER: mm_pbsa JunJun Liu (Fri Jul 29 2005 - 19:58:53 CDT)
- Re: AMBER: mm_pbsa Wei Chen (Fri Jul 29 2005 - 20:09:13 CDT)
- Re: AMBER: mm_pbsa JunJun Liu (Fri Jul 29 2005 - 21:22:20 CDT)
- AMBER: Failed sander runs for large systems Pratul K. Agarwal (Fri Jul 29 2005 - 21:41:44 CDT)
- RE: AMBER: temperature keep increasing in high temp. Yong Duan (Fri Jul 29 2005 - 22:43:52 CDT)
- Re: AMBER: mm_pbsa Wei Chen (Fri Jul 29 2005 - 22:53:36 CDT)
- Re: AMBER: Failed sander runs for large systems Guanglei Cui (Fri Jul 29 2005 - 23:33:27 CDT)
- AMBER: RESTARTED DUE TO LINMIN FAILURE Sukjoon Yoon (Sat Jul 30 2005 - 01:00:24 CDT)
- Re: AMBER: RESTARTED DUE TO LINMIN FAILURE David A. Case (Sat Jul 30 2005 - 11:59:19 CDT)
- AMBER: Amber parameters for ADP zgleo (Sat Jul 30 2005 - 00:22:19 CDT)
- Re: AMBER: Failed sander runs for large systems David A. Case (Sat Jul 30 2005 - 11:57:14 CDT)
- Re: AMBER: Amber parameters for ADP David A. Case (Sat Jul 30 2005 - 12:08:08 CDT)
- Re: Re: AMBER: mm_pbsa zgleo (Sun Jul 31 2005 - 10:26:02 CDT)
- AMBER: questions about MG ions JIANING WANG (Sun Jul 31 2005 - 18:12:36 CDT)
- AMBER: AMBER8 crashes machine(nodes) under IBM compiler, Suse Linux, amd IBM loadleveler Soo (Sun Jul 31 2005 - 21:45:01 CDT)
- Re: AMBER: questions about MG ions Kara Di Giorgio (Sun Jul 31 2005 - 23:55:46 CDT)
Last message date: Sat Dec 31 2005 - 12:51:27 CST
Archived on: Sat Dec 31 2005 - 12:51:45 CST
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