AMBER Archive (2005)

Subject: AMBER: Trouble with Amber8

From: Dustin (amber_at_compbio.iupui.edu)
Date: Tue Jul 19 2005 - 15:16:10 CDT

We are trying to install Amber on Red Hat Linux v3.0 WS (kernel 2.4),
the machine has a Pentium 4 3.0Ghz, 1GB DDR ram. The program configures
(./configure ifort) and makes (make serial) fine. When it comes time to
test is when it fails.

  cd dmp; ./Run.dmp
                                                     
  forrtl: severe (174): SIGSEGV, segmentation fault occurred
  Image PC Routine Line Source

  libc.so.6 00681039 Unknown Unknown Unknown
  Stack trace terminated
abnormally.
    ./Run.dmp: Program
error
  make: *** [test.sander.no_lmod] Error 1

I get the same error when I us Red Hat Linux v4.0 WS (kernel 2.6) . I
have recently tried Gentoo Linux and it worked fine. Is there some
library that Red Hat needs.

Additional Info:
Intel Fortran: 9.0.021
Math Kernel Library: 7.2.008

Red Hat v3.0 WS
GCC: 3.2.3 20030502 (Red Hat Linux 3.2.3-52)
Kernel: 2.4.21-32.ELsmp

Red Hat v4.0 WS
GCC: 3.4.3 20050227
Kernel: 2.6.9-11.ELsmp

Gentoo 2005.0
GCC: 3.3.5.20050130-r1
Kernel: 2.6.12-gentoo-r4
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