AMBER Archive (2005)

Subject: RE: AMBER: AMBER-process_mdout.perl

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Mon Jul 18 2005 - 10:24:18 CDT

Dear Praveena,
 
This script was written initially just for the tutorials and so was never
officially included in the Amber distribution. However, since many people
are now using I may add an updated version of it to the AMBER 9 distribution
when it is released. For the time being you can download it from:
http://amber.scripps.edu/tutorial/polyA-polyT_New/misc_files/process_mdout.p
erl
 
I realise that in several of the beginning Amber workshop tutorials it
states that this file should be installed on your machine. This is because
these tutorials were designed originally for in house use at a workshop
where we had specifically set up the machines for the participants. Since
these tutorials are now public I will attempt to go through and change this
to the download link.
 
All the best
Ross

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From: owner-amber_at_scripps.edu [mailto:owner-amber_at_scripps.edu] On Behalf Of
Praveena Gopal
Sent: Monday, July 18, 2005 00:26
To: amber_at_scripps.edu
Subject: AMBER: AMBER-process_mdout.perl

Dear Amber Users,
 
I could not find a perl script, process_mdout.perl in the exe directory for
the extraction of energies.
 
Is this because of improper installation?
 
How can I rectify this.Suggest an idea.
 
Thankyou,
Praveena.G

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