AMBER Archive (2007) - Apr 2007 By Thread

Starting: Mon Apr 02 2007 - 00:13:17 CDT
Ending: Mon Apr 30 2007 - 21:16:08 CDT

• RE: AMBER: enzyme kinetics in silico Xu, Yong (Tue Apr 03 2007 - 14:26:45 CDT)
  • Re: AMBER: enzyme kinetics in silico Sean Rathlef (Tue Apr 03 2007 - 16:08:10 CDT)
• Re: AMBER: how to modify map.DG-AMBER file? A Box (Tue Apr 10 2007 - 18:56:21 CDT)
• AMBER: netcdf support needed (Amber 9, sander imin = 5, -y flag) Chris Moth (Fri Apr 06 2007 - 13:50:29 CDT)
• Re: AMBER: Problem with PCSHIFT module Edoardo Saccenti (Tue Apr 03 2007 - 03:08:38 CDT)
• Re: AMBER: Problem with PCSHIFT module Edoardo Saccenti (Thu Apr 12 2007 - 07:40:55 CDT)
• Re: AMBER: Problem with PCSHIFT module David A. Case (Sun Apr 15 2007 - 23:24:01 CDT)
• Re: AMBER: is possible to compile pmemd using scali MPI? Andrea Bortolato (Mon Apr 23 2007 - 07:31:53 CDT)
• AMBER: phosphorylated residues yxamber (Mon Apr 02 2007 - 00:13:17 CDT)
  • Re: AMBER: phosphorylated residues David A. Case (Mon Apr 02 2007 - 17:13:37 CDT)
    • undefinedRe: AMBER: phosphorylated residues yxamber (Tue Apr 03 2007 - 08:12:35 CDT)
• AMBER: Error at Equilibration.... Sandeep Kaushik (Mon Apr 02 2007 - 02:14:17 CDT)
  • Re: AMBER: Error at Equilibration.... David A. Case (Mon Apr 02 2007 - 10:45:57 CDT)
• AMBER: Problem with sander.MPI Sandeep Kaushik (Mon Apr 02 2007 - 08:06:21 CDT)
• AMBER: RE: dihedral term charge dependence Williamson, Mark (Mon Apr 02 2007 - 11:07:29 CDT)
  • Re: AMBER: RE: dihedral term charge dependence Carlos Simmerling (Mon Apr 02 2007 - 11:14:15 CDT)
• AMBER: restraint command not taken deepti nayar (Mon Apr 02 2007 - 04:25:12 CDT)
  • AMBER: restraint command not taken deepti nayar (Mon Apr 02 2007 - 05:21:51 CDT)
    • Re: AMBER: restraint command not taken Vlad Cojocaru (Mon Apr 02 2007 - 11:16:16 CDT)
  • Re: AMBER: restraint command not taken Vlad Cojocaru (Mon Apr 02 2007 - 11:57:37 CDT)
  • AMBER: restraint command not taken deepti nayar (Mon Apr 02 2007 - 04:54:44 CDT)
• AMBER: Xleap errors Beale, John (Mon Apr 02 2007 - 12:20:43 CDT)
  • Re: AMBER: Xleap errors David A. Case (Mon Apr 02 2007 - 12:32:47 CDT)
• AMBER: Cut off for cavities Sangwai, Ashishvikas (Mon Apr 02 2007 - 13:47:30 CDT)
• AMBER: Extra Points... How to Deal with Them David Cerutti (Tue Apr 03 2007 - 01:39:23 CDT)
• AMBER: Sander.... Rita Cassia (Tue Apr 03 2007 - 03:23:06 CDT)
  • RE: AMBER: Sander.... Ross Walker (Tue Apr 03 2007 - 10:28:51 CDT)
• AMBER: nmode Marie Brut (Tue Apr 03 2007 - 05:17:39 CDT)
  • Re: AMBER: nmode David A. Case (Tue Apr 03 2007 - 10:25:52 CDT)
  • Re: AMBER: nmode Marie Brut (Tue Apr 03 2007 - 10:42:17 CDT)
    • Re: AMBER: nmode David A. Case (Tue Apr 03 2007 - 11:31:54 CDT)
• AMBER: Regarding Simulated Annealing Anju Sharma (Tue Apr 03 2007 - 07:27:18 CDT)
  • RE: AMBER: Regarding Simulated Annealing Ross Walker (Tue Apr 03 2007 - 10:43:55 CDT)
• AMBER: RE: dihedral term charge dependence Kateryna Miroshnychenko (Tue Apr 03 2007 - 08:59:08 CDT)
• AMBER: sander bomb janavi raghavan (Tue Apr 03 2007 - 09:28:39 CDT)
  • RE: AMBER: sander bomb Ross Walker (Tue Apr 03 2007 - 10:35:40 CDT)
• AMBER: principal axis calculation in Ptraj Esther Brugger (Tue Apr 03 2007 - 16:05:44 CDT)
• AMBER: Energy minimization problem Bo Baker (Tue Apr 03 2007 - 20:24:05 CDT)
  • Re: AMBER: Energy minimization problem David A. Case (Tue Apr 03 2007 - 20:39:37 CDT)
    • RE: AMBER: Energy minimization problem Bo Baker (Wed Apr 04 2007 - 19:02:42 CDT)
      • Re: AMBER: Energy minimization problem David A. Case (Wed Apr 04 2007 - 20:25:26 CDT)
      • RE: AMBER: Energy minimization problem Bo Baker (Thu Apr 05 2007 - 05:14:31 CDT)
• AMBER: about define improper torsion in .frcmod file Chengwen Chen (Wed Apr 04 2007 - 04:02:57 CDT)
  • Re: AMBER: about define improper torsion in .frcmod file David A. Case (Wed Apr 04 2007 - 10:25:11 CDT)
• AMBER: parse radii AYTUG TUNCEL (Wed Apr 04 2007 - 04:10:10 CDT)
  • Re: AMBER: parse radii Holger Gohlke (Wed Apr 04 2007 - 04:24:17 CDT)
    • Re: Re: AMBER: parse radii AYTUG TUNCEL (Mon Apr 09 2007 - 03:02:59 CDT)
      • Re: Re: AMBER: parse radii Gohlke_at_bioinformatik.uni-frankfurt.de (Mon Apr 09 2007 - 04:35:06 CDT)
• AMBER: FW: parameter Ross Walker (Wed Apr 04 2007 - 10:18:07 CDT)
• AMBER: choice of alpha carbons vs side chains Christopher Gaughan (Wed Apr 04 2007 - 17:34:31 CDT)
• Re: AMBER: choice of alpha carbons vs side chains Bill Ross (Wed Apr 04 2007 - 18:28:34 CDT)
• AMBER: Charges in antechamber Beale, John (Thu Apr 05 2007 - 10:46:34 CDT)
  • Re: AMBER: Charges in antechamber Scott Brozell (Thu Apr 05 2007 - 15:43:59 CDT)
• AMBER: Problems during compilation and test. Liang, Lei (Thu Apr 05 2007 - 15:43:23 CDT)
  • Re: AMBER: Problems during compilation and test. Scott Brozell (Thu Apr 05 2007 - 21:11:30 CDT)
    • Re: AMBER: Problems during compilation and test. Liang, Lei (Mon Apr 09 2007 - 12:21:39 CDT)
      • Re: AMBER: Problems during compilation and test. David A. Case (Tue Apr 10 2007 - 20:27:39 CDT)
• AMBER: principal mask dorotation Esther Brugger (Thu Apr 05 2007 - 16:46:51 CDT)
• AMBER: amber 9 installation: broken pipe Stern, Julie (Thu Apr 05 2007 - 18:54:16 CDT)
  • Re: AMBER: amber 9 installation: broken pipe Scott Brozell (Thu Apr 05 2007 - 20:46:09 CDT)
• AMBER: MD at constan pH tri nam Vo (Fri Apr 06 2007 - 09:10:18 CDT)
  • Re: AMBER: MD at constan pH Scott Brozell (Fri Apr 06 2007 - 11:41:39 CDT)
    • Re: AMBER: MD at constan pH tri nam Vo (Fri Apr 06 2007 - 22:53:52 CDT)
      • Re: AMBER: MD at constan pH tri nam Vo (Fri Apr 06 2007 - 23:05:20 CDT)
• AMBER: Blue Gene, compile Amber9? Mike Hanby (Fri Apr 06 2007 - 12:22:57 CDT)
  • Re: AMBER: Blue Gene, compile Amber9? Carlos P. Sosa (Fri Apr 06 2007 - 13:55:28 CDT)
  • RE: AMBER: Blue Gene, compile Amber9? Ross Walker (Fri Apr 06 2007 - 16:23:33 CDT)
    • RE: AMBER: Blue Gene, compile Amber9? Mike Hanby (Tue Apr 10 2007 - 09:04:13 CDT)
      • RE: AMBER: Blue Gene, compile Amber9? Mike Hanby (Tue Apr 10 2007 - 10:13:11 CDT)
      • Re: AMBER: Blue Gene, compile Amber9? Robert Duke (Tue Apr 10 2007 - 10:42:11 CDT)
      • RE: AMBER: Blue Gene, compile Amber9? Mike Hanby (Thu Apr 19 2007 - 09:34:46 CDT)
      • Re: AMBER: Blue Gene, compile Amber9? David A. Case (Thu Apr 19 2007 - 16:31:25 CDT)
      • RE: AMBER: Blue Gene, compile Amber9? Mike Hanby (Fri Apr 20 2007 - 14:33:39 CDT)
      • AMBER: dihedral angles restraint for DNA Hu, Shaowen (JSC-SK)[USRA] (Tue Apr 10 2007 - 12:51:13 CDT)
• AMBER: SANDER PMEMD ntpr ntwx discrepancy (?bug? report) Chris Moth (Fri Apr 06 2007 - 16:07:17 CDT)
  • Re: AMBER: SANDER PMEMD ntpr ntwx discrepancy (?bug? report) David A. Case (Fri Apr 06 2007 - 17:37:46 CDT)
    • AMBER: SANDER PMEMD ntpr ntwx discrepancy (?bug? report) Chris Moth (Mon Apr 09 2007 - 12:32:35 CDT)
• AMBER: PDB file format for AMBER Neelanjana Sengupta (Fri Apr 06 2007 - 21:41:43 CDT)
  • Re: AMBER: PDB file format for AMBER David A. Case (Sat Apr 07 2007 - 10:56:18 CDT)
• Re: AMBER: pH effect on protein folding tri nam Vo (Sat Apr 07 2007 - 01:27:40 CDT)
• AMBER: Extra points... virial computation David Cerutti (Sun Apr 08 2007 - 01:48:11 CDT)
• AMBER: ptraj:problems with time correlation calculation (comp. with NMR experiments) anna.schrey_at_gmx.de (Sun Apr 08 2007 - 07:21:38 CDT)
  • Re: AMBER: ptraj:problems with time correlation calculation (comp. with NMR experiments) David A. Case (Mon Apr 09 2007 - 12:27:59 CDT)
• AMBER: supplement ptraj:problems with time correlation calculation (comp. with NMR experiments) anna.schrey_at_gmx.de (Sun Apr 08 2007 - 09:15:22 CDT)
  • Re: AMBER: supplement ptraj:problems with time correlation calculation (comp. with NMR experiments) David A. Case (Mon Apr 09 2007 - 09:56:56 CDT)
• AMBER: ptraj hbond Evan Kelly (Sun Apr 08 2007 - 19:37:04 CDT)
  • Re: AMBER: ptraj hbond Evan Kelly (Sun Apr 08 2007 - 21:00:29 CDT)
• AMBER: Fails to load libraries present in /leap/lib/ Neelanjana Sengupta (Mon Apr 09 2007 - 04:33:29 CDT)
  • Re: AMBER: Fails to load libraries present in /leap/lib/ David A. Case (Mon Apr 09 2007 - 12:25:41 CDT)
  • RE: AMBER: Fails to load libraries present in /leap/lib/ Ross Walker (Tue Apr 10 2007 - 17:53:07 CDT)
• AMBER: Vlad has Tagged you! :) Vlad Cojocaru (Mon Apr 09 2007 - 05:06:37 CDT)
• AMBER: NTX=7 ?............lastist= ?...........lastrst= ????? Sandeep Kaushik (Mon Apr 09 2007 - 05:35:54 CDT)
  • Re: AMBER: NTX=7 ?............lastist= ?...........lastrst= ????? j j (Mon Apr 09 2007 - 09:18:58 CDT)
  • Re: AMBER: NTX=7 ?............lastist= ?...........lastrst= ????? David A. Case (Mon Apr 09 2007 - 12:21:21 CDT)
  • RE: AMBER: NTX=7 ?............lastist= ?...........lastrst= ????? Ross Walker (Tue Apr 10 2007 - 17:53:19 CDT)
    • Re: AMBER: NTX=7 ?............lastist= ?...........lastrst= ????? Sandeep Kaushik (Thu Apr 12 2007 - 01:11:40 CDT)
• AMBER: I'm sorry ... please ignore the junk !! Vlad Cojocaru (Mon Apr 09 2007 - 05:50:54 CDT)
• AMBER: Question about MMPBSA v9 Cenk Andac (Mon Apr 09 2007 - 05:54:39 CDT)
  • Re: AMBER: Question about MMPBSA v9 David A. Case (Tue Apr 10 2007 - 21:20:58 CDT)
    • Re: AMBER: Question about MMPBSA v9 Cenk Andac (Wed Apr 11 2007 - 05:38:12 CDT)
• AMBER: Constant volume simulations Christopher Gaughan (Mon Apr 09 2007 - 13:59:26 CDT)
  • Re: AMBER: Constant volume simulations David A. Case (Mon Apr 09 2007 - 15:24:09 CDT)
    • Re: AMBER: Constant volume simulations Christopher Gaughan (Tue Apr 10 2007 - 10:31:58 CDT)
      • Re: AMBER: Constant volume simulations Carlos Simmerling (Tue Apr 10 2007 - 10:35:14 CDT)
      • Re: AMBER: Constant volume simulations Vlad Cojocaru (Tue Apr 10 2007 - 10:39:45 CDT)
      • Re: AMBER: Constant volume simulations Christopher Gaughan (Tue Apr 10 2007 - 10:50:39 CDT)
      • Re: AMBER: Constant volume simulations Vlad Cojocaru (Tue Apr 10 2007 - 11:02:42 CDT)
      • Re: AMBER: Constant volume simulations Christopher Gaughan (Tue Apr 10 2007 - 12:12:14 CDT)
• AMBER: Sander Bomb in subroutine nonbond_list Jingyuan Luke (Mon Apr 09 2007 - 21:34:51 CDT)
• AMBER: Problem while using antechamber Anju Sharma (Tue Apr 10 2007 - 01:15:47 CDT)
  • Re: AMBER: Problem while using antechamber Benjamin Juhl (Tue Apr 10 2007 - 02:12:13 CDT)
    • Re: AMBER: Problem while using antechamber Anju Sharma (Tue Apr 10 2007 - 04:18:07 CDT)
• AMBER: problem related to visualizing of structure deepti nayar (Tue Apr 10 2007 - 01:33:40 CDT)
  • Re: AMBER: problem related to visualizing of structure Vlad Cojocaru (Tue Apr 10 2007 - 03:25:06 CDT)
    • Re: AMBER: problem related to visualizing of structure deepti nayar (Tue Apr 10 2007 - 04:18:38 CDT)
      • Re: AMBER: problem related to visualizing of structure Vlad Cojocaru (Tue Apr 10 2007 - 04:32:01 CDT)
      • Re: AMBER: problem related to visualizing of structure deepti nayar (Tue Apr 10 2007 - 04:42:58 CDT)
• AMBER: sander (AMBER 9) and -y flag -- not working? David Mobley (Tue Apr 10 2007 - 13:22:39 CDT)
  • Re: AMBER: sander (AMBER 9) and -y flag -- not working? Chris Moth (Tue Apr 10 2007 - 13:36:22 CDT)
    • Re: AMBER: sander (AMBER 9) and -y flag -- not working? David Mobley (Tue Apr 10 2007 - 13:52:29 CDT)
      • Re: AMBER: sander (AMBER 9) and -y flag -- not working? David Mobley (Tue Apr 10 2007 - 14:04:52 CDT)
      • Re: AMBER: sander (AMBER 9) and -y flag -- not working? Carlos Simmerling (Tue Apr 10 2007 - 14:10:41 CDT)
      • Re: AMBER: sander (AMBER 9) and -y flag -- not working? David Mobley (Tue Apr 10 2007 - 14:31:56 CDT)
• AMBER: amber9: running parallel error Khatcharin Siriwong (Wed Apr 11 2007 - 03:08:16 CDT)
  • RE: AMBER: amber9: running parallel error Ross Walker (Wed Apr 11 2007 - 08:43:19 CDT)
    • RE: AMBER: amber9: running parallel error Khatcharin Siriwong (Wed Apr 11 2007 - 22:40:27 CDT)
      • Re: AMBER: amber9: running parallel error Benjamin Juhl (Thu Apr 12 2007 - 03:33:48 CDT)
      • Re: AMBER: amber9: running parallel error Khatcharin Siriwong (Wed Apr 18 2007 - 02:03:13 CDT)
    • RE: AMBER: amber9: running parallel error Khatcharin Siriwong (Wed Apr 18 2007 - 02:00:29 CDT)
• AMBER: Prblm rgrdng Simulated Annealing Anju Sharma (Wed Apr 11 2007 - 05:06:08 CDT)
  • Re: AMBER: Prblm rgrdng Simulated Annealing Carlos Simmerling (Wed Apr 11 2007 - 06:23:43 CDT)
    • Re: AMBER: Prblm rgrdng Simulated Annealing Anju Sharma (Wed Apr 11 2007 - 06:33:03 CDT)
      • Re: AMBER: Prblm rgrdng Simulated Annealing Carlos Simmerling (Wed Apr 11 2007 - 06:39:30 CDT)
      • Re: AMBER: Prblm rgrdng Simulated Annealing Anju Sharma (Wed Apr 11 2007 - 06:46:08 CDT)
• AMBER: Problem with Sander restart file. Martin Stennett (Wed Apr 11 2007 - 05:56:37 CDT)
  • Re: AMBER: Problem with Sander restart file. Navnit Kumar Mishra (Wed Apr 11 2007 - 06:19:20 CDT)
    • Re: AMBER: Problem with Sander restart file. Martin Stennett (Wed Apr 11 2007 - 06:45:03 CDT)
  • Re: AMBER: Problem with Sander restart file. David A. Case (Wed Apr 11 2007 - 13:11:40 CDT)
• AMBER: temperature artifacts with andersen and GB? David Mobley (Wed Apr 11 2007 - 11:50:17 CDT)
• AMBER: working with Antechamber Atila Iamarino (Wed Apr 11 2007 - 12:45:20 CDT)
  • Re: AMBER: working with Antechamber David Mobley (Wed Apr 11 2007 - 13:34:55 CDT)
    • Re: AMBER: working with Antechamber Atila Iamarino (Wed Apr 11 2007 - 13:59:03 CDT)
      • Re: AMBER: working with Antechamber David A. Case (Wed Apr 11 2007 - 14:56:00 CDT)
• AMBER: CHARMM vs. AMBER ff literature Seth Lilavivat (Wed Apr 11 2007 - 10:21:07 CDT)
  • Re: AMBER: CHARMM vs. AMBER ff literature Thomas Cheatham (Wed Apr 11 2007 - 16:21:14 CDT)
  • Re: AMBER: CHARMM vs. AMBER ff literature Jiri Sponer (Thu Apr 12 2007 - 07:58:32 CDT)
    • AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Thu Apr 12 2007 - 09:38:09 CDT)
      • Re: AMBER: nscm in simulation annealing David A. Case (Thu Apr 12 2007 - 11:41:03 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Thu Apr 12 2007 - 12:53:18 CDT)
      • Re: AMBER: nscm in simulation annealing David A. Case (Thu Apr 12 2007 - 19:05:01 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Fri Apr 13 2007 - 10:32:26 CDT)
      • AMBER: Restraints and free energy Sophie Barbe (Fri Apr 13 2007 - 11:05:06 CDT)
      • Re: AMBER: Restraints and free energy David A. Case (Fri Apr 13 2007 - 12:22:49 CDT)
      • Re: AMBER: nscm in simulation annealing David A. Case (Fri Apr 13 2007 - 12:22:32 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Fri Apr 13 2007 - 13:36:59 CDT)
      • Re: AMBER: nscm in simulation annealing David A. Case (Fri Apr 13 2007 - 14:48:13 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Fri Apr 13 2007 - 15:13:07 CDT)
      • AMBER: Explicit water opinion Hayden Eastwood (Fri Apr 13 2007 - 13:39:19 CDT)
      • Re: AMBER: Explicit water opinion David Cerutti (Fri Apr 13 2007 - 17:58:32 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Tue Apr 17 2007 - 10:25:05 CDT)
      • Re: AMBER: nscm in simulation annealing David A. Case (Tue Apr 17 2007 - 11:18:02 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Tue Apr 17 2007 - 11:26:01 CDT)
      • RE: AMBER: nscm in simulation annealing Ross Walker (Tue Apr 17 2007 - 11:25:35 CDT)
      • RE: AMBER: nscm in simulation annealing Hu, Shaowen (JSC-SK)[USRA] (Tue Apr 17 2007 - 11:59:43 CDT)
• AMBER: Attaching capping groups Neelanjana Sengupta (Wed Apr 11 2007 - 20:28:33 CDT)
  • Re: AMBER: Attaching capping groups Kristina Furse (Wed Apr 11 2007 - 21:30:30 CDT)
  • RE: AMBER: Attaching capping groups Ross Walker (Wed Apr 11 2007 - 22:49:36 CDT)
    • Re: AMBER: Attaching capping groups Neelanjana Sengupta (Thu Apr 12 2007 - 21:54:30 CDT)
      • RE: AMBER: Attaching capping groups Ross Walker (Sun Apr 15 2007 - 22:49:26 CDT)
• AMBER: Needed help regardng Simulated Annealing Anju Sharma (Thu Apr 12 2007 - 00:07:14 CDT)
• AMBER: How can I modify the frcmod file of ligand with a nonstandard guanidine tonglei (Thu Apr 12 2007 - 02:13:34 CDT)
• AMBER: topology for postprocessed files? anna.schrey_at_gmx.de (Thu Apr 12 2007 - 04:57:28 CDT)
  • Re: AMBER: topology for postprocessed files? Vlad Cojocaru (Thu Apr 12 2007 - 05:07:08 CDT)
    • Re: AMBER: topology for postprocessed files? anna.schrey_at_gmx.de (Thu Apr 12 2007 - 05:42:41 CDT)
    • Re: AMBER: topology for postprocessed files? anna.schrey_at_gmx.de (Wed Apr 18 2007 - 12:40:51 CDT)
• AMBER: bad atom type errors in GB for halides? David Mobley (Thu Apr 12 2007 - 12:19:51 CDT)
  • Re: AMBER: bad atom type errors in GB for halides? Ilyas Yildirim (Thu Apr 12 2007 - 14:57:13 CDT)
  • Re: AMBER: bad atom type errors in GB for halides? David A. Case (Thu Apr 12 2007 - 19:04:55 CDT)
• AMBER: Multiple Bonds to one Atom crowfoot_at_unr.nevada.edu (Thu Apr 12 2007 - 15:41:36 CDT)
• AMBER: polarization and water density Thérèse Malliavin (Fri Apr 13 2007 - 04:36:44 CDT)
  • Re: AMBER: polarization and water density David A. Case (Fri Apr 13 2007 - 14:53:42 CDT)
• AMBER: AMBER9 installation error on dual core AMD Opteron(tm) processor 275 Arvind Marathe (Fri Apr 13 2007 - 05:23:38 CDT)
  • Re: AMBER: AMBER9 installation error on dual core AMD Opteron(tm) processor 275 Mark Williamson (Fri Apr 13 2007 - 07:51:54 CDT)
    • Re: AMBER: AMBER9 installation error on dual core AMD Opteron(tm) processor 275 Arvind Marathe (Fri Apr 13 2007 - 10:59:35 CDT)
• AMBER: Amber:PBSA&Extract_coords problem (Needed help) odde (Fri Apr 13 2007 - 14:06:42 CDT)
  • Re: AMBER: Amber:PBSA&Extract_coords problem (Needed help) Jiten (Sat Apr 14 2007 - 08:51:58 CDT)
• AMBER: QMMM with printcharges Kijeong Kwac (Fri Apr 13 2007 - 19:37:45 CDT)
  • RE: AMBER: QMMM with printcharges Ross Walker (Tue Apr 17 2007 - 16:37:27 CDT)
• AMBER: mdfil.f Peljidiyn Genden (Sat Apr 14 2007 - 02:43:27 CDT)
  • Re: AMBER: mdfil.f Robert Duke (Mon Apr 16 2007 - 12:02:28 CDT)
  • Re: AMBER: mdfil.f David A. Case (Mon Apr 16 2007 - 12:25:02 CDT)
• AMBER: Amber 8 support of CHARMM ff? Seth Lilavivat (Sat Apr 14 2007 - 13:36:35 CDT)
  • Re: AMBER: Amber 8 support of CHARMM ff? David A. Case (Sat Apr 14 2007 - 14:21:23 CDT)
• AMBER: Release of the R.E.D.-III tools FyD (Sun Apr 15 2007 - 05:10:25 CDT)
• Re: AMBER: membrane simulation Florian Haberl (Mon Apr 16 2007 - 09:04:04 CDT)
  • Re: AMBER: membrane simulation nag raj (Wed Apr 18 2007 - 21:53:27 CDT)
    • Re: AMBER: membrane simulation Vlad Cojocaru (Thu Apr 19 2007 - 04:07:52 CDT)
      • Re: AMBER: membrane simulation nag raj (Thu Apr 19 2007 - 07:51:56 CDT)
• AMBER: Projecting trajectories onto normal modes Harald Lanig (Mon Apr 16 2007 - 09:50:38 CDT)
• AMBER: ptraj and quasi harmonic analysis Hans Lee (Mon Apr 16 2007 - 16:19:34 CDT)
  • Re: AMBER: ptraj and quasi harmonic analysis Hans Lee (Wed Apr 18 2007 - 09:47:11 CDT)
    • Re: AMBER: ptraj and quasi harmonic analysis Myunggi Yi (Wed Apr 18 2007 - 11:46:22 CDT)
    • AMBER: ptraj and quasi harmonic analysis Chris Moth (Thu Apr 19 2007 - 14:58:52 CDT)
      • Re: AMBER: ptraj and quasi harmonic analysis Thomas Cheatham III (Thu Apr 19 2007 - 15:26:35 CDT)
      • Re: AMBER: ptraj and quasi harmonic analysis Hans Lee (Thu Apr 19 2007 - 20:46:38 CDT)
      • Re: AMBER: ptraj and quasi harmonic analysis David A. Case (Fri Apr 20 2007 - 10:23:34 CDT)
      • Re: AMBER: ptraj and quasi harmonic analysis Hans Lee (Fri Apr 20 2007 - 11:35:49 CDT)
      • Re: AMBER: ptraj and quasi harmonic analysis David A. Case (Fri Apr 20 2007 - 11:49:26 CDT)
• AMBER: MM-PBSA_binding energy script error odde (Mon Apr 16 2007 - 18:33:14 CDT)
• AMBER: Re: amber mm-pbsa problem Jiten (Mon Apr 16 2007 - 20:39:26 CDT)
  • Re: AMBER: Re: amber mm-pbsa problem odde (Tue Apr 17 2007 - 08:57:37 CDT)
• AMBER: problem with calculating RMSD tri nam Vo (Tue Apr 17 2007 - 02:01:35 CDT)
  • Re: AMBER: problem with calculating RMSD Gustavo Seabra (Tue Apr 17 2007 - 07:41:26 CDT)
    • Re: AMBER: problem with calculating RMSD tri nam Vo (Wed Apr 18 2007 - 03:22:45 CDT)
      • Re: AMBER: problem with calculating RMSD Gustavo Seabra (Wed Apr 18 2007 - 09:50:21 CDT)
      • RE: AMBER: problem with calculating RMSD Ross Walker (Wed Apr 18 2007 - 11:03:37 CDT)
• AMBER: vmd and amber deepti nayar (Tue Apr 17 2007 - 06:58:51 CDT)
  • Re: AMBER: vmd and amber Gustavo Seabra (Tue Apr 17 2007 - 07:33:48 CDT)
• AMBER: PDBs Beale, John (Tue Apr 17 2007 - 07:22:42 CDT)
  • Re: AMBER: PDBs John E. Kerrigan (Tue Apr 17 2007 - 07:40:54 CDT)
• AMBER: ptraj secstruct core dumped error vijayaraj_at_clri.info (Tue Apr 17 2007 - 08:45:04 CDT)
• AMBER: Request for addition of a useful command in ptraj module of AMBER Cenk Andac (Tue Apr 17 2007 - 12:18:30 CDT)
• AMBER: Request for addition of a useful command in ptraj module of AMBER #2 Cenk Andac (Tue Apr 17 2007 - 12:24:37 CDT)
  • Re: AMBER: Request for addition of a useful command in ptraj module of AMBER #2 Melinda Layten (Mon Apr 23 2007 - 16:52:26 CDT)
    • Re: AMBER: Request for addition of a useful command in ptraj module of AMBER #2 Cenk Andac (Mon Apr 23 2007 - 17:35:36 CDT)
      • Re: AMBER: Request for addition of a useful command in ptraj module of AMBER #2 Vlad Cojocaru (Tue Apr 24 2007 - 03:30:40 CDT)
• AMBER: Re: MM-PBSA amber script problem odde (Tue Apr 17 2007 - 13:45:06 CDT)
  • Re: AMBER: Re: MM-PBSA amber script problem David A. Case (Tue Apr 17 2007 - 16:35:59 CDT)
• AMBER: single solvated glycine simulation - zwitterion, cation, anion parameters? Nicolas Lux Fawzi (Tue Apr 17 2007 - 14:00:18 CDT)
• AMBER: using glycam04 parameters Sara Alexandra Moura (Tue Apr 17 2007 - 14:17:44 CDT)
  • Re: AMBER: using glycam04 parameters David A. Case (Tue Apr 17 2007 - 16:37:35 CDT)
    • Re: AMBER: using glycam04 parameters FyD (Wed Apr 18 2007 - 05:57:02 CDT)
      • Re: AMBER: using glycam04 parameters Austin B. Yongye (Wed Apr 18 2007 - 08:24:38 CDT)
      • Re: AMBER: using glycam04 parameters Sara Alexandra Moura (Wed Apr 18 2007 - 09:59:10 CDT)
      • Re: AMBER: using glycam04 parameters David A. Case (Wed Apr 18 2007 - 10:28:27 CDT)
      • Re: AMBER: using glycam04 parameters Sara Alexandra Moura (Thu Apr 19 2007 - 11:27:38 CDT)
      • Re: AMBER: using glycam04 parameters kkirschn_at_hamilton.edu (Thu Apr 19 2007 - 12:53:37 CDT)
      • Re: AMBER: using glycam04 parameters Sara Alexandra Moura (Thu Apr 19 2007 - 13:35:16 CDT)
      • RE: AMBER: using glycam04 parameters Ross Walker (Thu Apr 19 2007 - 14:00:01 CDT)
      • Re: AMBER: using glycam04 parameters kkirschn_at_hamilton.edu (Wed Apr 25 2007 - 15:02:49 CDT)
      • Re: AMBER: using glycam04 parameters Austin B. Yongye (Wed Apr 18 2007 - 11:03:35 CDT)
    • Re: AMBER: using glycam04 parameters Sara Alexandra Moura (Wed Apr 18 2007 - 10:10:35 CDT)
• AMBER: single solvated glycine simulation - zwitterion, cation, anion parameters? 2nd try Nicolas Lux Fawzi (Tue Apr 17 2007 - 16:50:07 CDT)
  • Re: AMBER: single solvated glycine simulation - zwitterion, cation, anion parameters? 2nd try Pradipta Bandyopadhyay (Tue Apr 17 2007 - 23:33:52 CDT)
• AMBER: frcmod file deepti nayar (Wed Apr 18 2007 - 01:31:52 CDT)
  • Re: AMBER: frcmod file David A. Case (Wed Apr 18 2007 - 10:22:01 CDT)
  • RE: AMBER: frcmod file Ross Walker (Wed Apr 18 2007 - 10:51:20 CDT)
• AMBER: printcharges option when using QM/MM simulation ÇÑÀç¹ü (Wed Apr 18 2007 - 01:41:33 CDT)
  • RE: AMBER: printcharges option when using QM/MM simulation Ross Walker (Wed Apr 18 2007 - 10:31:17 CDT)
• AMBER: Protonation/deprotonation of terminal residues Jesper Soerensen (Wed Apr 18 2007 - 07:56:26 CDT)
  • Re: AMBER: Protonation/deprotonation of terminal residues FyD (Wed Apr 18 2007 - 13:26:47 CDT)
• AMBER: signal SIGSEGV(11) Pankaj R. Daga (Wed Apr 18 2007 - 10:25:55 CDT)
  • Re: AMBER: signal SIGSEGV(11) David A. Case (Wed Apr 18 2007 - 10:49:24 CDT)
  • RE: AMBER: signal SIGSEGV(11) Ross Walker (Wed Apr 18 2007 - 11:09:10 CDT)
    • Re: AMBER: signal SIGSEGV(11) Pankaj R. Daga (Wed Apr 18 2007 - 14:16:48 CDT)
      • Re: AMBER: signal SIGSEGV(11) Chris Moth (Wed Apr 18 2007 - 15:22:58 CDT)
      • Re: AMBER: signal SIGSEGV(11) Pankaj R. Daga (Tue Apr 24 2007 - 09:55:14 CDT)
      • RE: AMBER: signal SIGSEGV(11) Ross Walker (Tue Apr 24 2007 - 14:43:49 CDT)
• AMBER: ff02 + POL3 - polar interactions !! Pradipta Bandyopadhyay (Wed Apr 18 2007 - 11:04:22 CDT)
• AMBER: Antechamber Warning Beale, John (Wed Apr 18 2007 - 14:39:31 CDT)
• AMBER: ptraj bug? Tamara Rogers (Wed Apr 18 2007 - 17:09:39 CDT)
• AMBER: Sander BOMB.. simulation terminates by itself... Vijay Manickam Achari (Wed Apr 18 2007 - 20:24:28 CDT)
• AMBER: Ewald BOMB....... what is this.. Vijay Manickam Achari (Wed Apr 18 2007 - 22:13:38 CDT)
  • RE: AMBER: Ewald BOMB....... what is this.. Ross Walker (Sat Apr 21 2007 - 12:08:15 CDT)
• AMBER: Antechamber Beale, John (Thu Apr 19 2007 - 08:51:03 CDT)
  • RE: AMBER: Antechamber Junmei Wang (Thu Apr 19 2007 - 08:58:14 CDT)
• AMBER: regarding frcmod file Santanu Roy (Thu Apr 19 2007 - 10:28:01 CDT)
  • Re: AMBER: regarding frcmod file Gustavo Seabra (Thu Apr 19 2007 - 10:50:44 CDT)
  • Re: AMBER: regarding frcmod file David A. Case (Thu Apr 19 2007 - 11:14:03 CDT)
• AMBER: RE: RE: AMBER: QMMM with printcharges Kijeong Kwac (Thu Apr 19 2007 - 10:42:38 CDT)
  • RE: AMBER: RE: RE: AMBER: QMMM with printcharges Ross Walker (Thu Apr 19 2007 - 11:42:15 CDT)
• AMBER: Problems with Machine file for sander.MPI Terry Lang (Thu Apr 19 2007 - 15:15:45 CDT)
  • RE: AMBER: Problems with Machine file for sander.MPI Ross Walker (Thu Apr 19 2007 - 16:02:24 CDT)
    • Re: AMBER: Problems with Machine file for sander.MPI Terry Lang (Tue Apr 24 2007 - 18:55:11 CDT)
• AMBER: AIX 5 test failures: -NaNQ Patrick McCarren (Thu Apr 19 2007 - 18:30:35 CDT)
  • Re: AMBER: AIX 5 test failures: -NaNQ Scott Brozell (Thu Apr 19 2007 - 19:13:54 CDT)
    • Re: AMBER: AIX 5 test failures: -NaNQ Patrick McCarren (Fri Apr 20 2007 - 18:01:53 CDT)
      • Re: AMBER: AIX 5 test failures: -NaNQ Scott Brozell (Mon Apr 23 2007 - 12:10:23 CDT)
      • Re: AMBER: AIX 5 test failures: -NaNQ Patrick McCarren (Mon Apr 23 2007 - 16:51:46 CDT)
      • RE: AMBER: AIX 5 test failures: -NaNQ Ross Walker (Mon Apr 23 2007 - 17:47:20 CDT)
      • Re: AMBER: AIX 5 test failures: -NaNQ Patrick McCarren (Wed Apr 25 2007 - 18:44:15 CDT)
  • Re: AMBER: AIX 5 test failures: -NaNQ David A. Case (Thu Apr 19 2007 - 20:13:46 CDT)
  • RE: AMBER: AIX 5 test failures: -NaNQ Ross Walker (Thu Apr 19 2007 - 20:20:46 CDT)
• AMBER: QM/MM NPT Simulation Daniel Oehme (Thu Apr 19 2007 - 23:46:14 CDT)
  • RE: AMBER: QM/MM NPT Simulation Ross Walker (Fri Apr 20 2007 - 10:22:25 CDT)
• AMBER: A test email Ruchi Sachdeva (Fri Apr 20 2007 - 01:54:55 CDT)
• AMBER: process and plot matrix data Vlad Cojocaru (Fri Apr 20 2007 - 04:28:12 CDT)
  • Re: AMBER: process and plot matrix data Patrick McCarren (Fri Apr 20 2007 - 05:02:15 CDT)
    • Re: AMBER: process and plot matrix data Vlad Cojocaru (Fri Apr 20 2007 - 08:18:46 CDT)
• AMBER: rigid epoxide substrate Dr M. Blomberg (Fri Apr 20 2007 - 06:24:13 CDT)
  • Re: AMBER: rigid epoxide substrate David A. Case (Fri Apr 20 2007 - 10:30:42 CDT)
• AMBER: restraint value: written but none specified Ben Sattelle (Fri Apr 20 2007 - 15:42:56 CDT)
  • Re: AMBER: restraint value: written but none specified David A. Case (Fri Apr 20 2007 - 16:15:05 CDT)
    • Re: AMBER: restraint value: written but none specified Ben Sattelle (Fri Apr 20 2007 - 17:08:55 CDT)
  • Re: AMBER: restraint value: written but none specified Chris Moth (Fri Apr 20 2007 - 16:16:52 CDT)
    • Re: AMBER: restraint value: written but none specified Ben Sattelle (Fri Apr 20 2007 - 16:51:30 CDT)
      • RE: AMBER: restraint value: written but none specified Ross Walker (Fri Apr 20 2007 - 17:37:01 CDT)
      • RE: AMBER: restraint value: written but none specified Ben Sattelle (Fri Apr 20 2007 - 18:05:47 CDT)
• AMBER: Error: "Suspended (tty input)" & "Unit 6 Error on OPEN: md.out" Khatcharin Siriwong (Sat Apr 21 2007 - 02:42:14 CDT)
  • Re: AMBER: Error: "Suspended (tty input)" & "Unit 6 Error on OPEN: md.out" David A. Case (Sat Apr 21 2007 - 14:04:23 CDT)
    • Re: AMBER: Error: "Suspended (tty input)" & "Unit 6 Error on OPEN: md.out" Khatcharin Siriwong (Sat Apr 21 2007 - 22:57:18 CDT)
    • AMBER: prep file new residue Dr M. Blomberg (Mon Apr 23 2007 - 03:48:27 CDT)
      • Re: AMBER: prep file new residue David A. Case (Tue Apr 24 2007 - 14:12:44 CDT)
• AMBER: mol2 format Jardas sucuriba (Sun Apr 22 2007 - 17:57:12 CDT)
  • Re: AMBER: mol2 format j j (Mon Apr 23 2007 - 04:04:53 CDT)
• AMBER: .prmtop entries Neelanjana Sengupta (Mon Apr 23 2007 - 00:53:46 CDT)
  • Re: AMBER: .prmtop entries Andy Purkiss-Trew (Mon Apr 23 2007 - 06:13:18 CDT)
• AMBER: problem regarding implicit simulation gurpreet singh (Mon Apr 23 2007 - 01:16:35 CDT)
  • Re: AMBER: problem regarding implicit simulation Carlos Simmerling (Mon Apr 23 2007 - 06:30:34 CDT)
    • Re: AMBER: problem regarding implicit simulation gurpreet singh (Tue Apr 24 2007 - 06:18:57 CDT)
      • Re: AMBER: problem regarding implicit simulation Carlos Simmerling (Tue Apr 24 2007 - 06:25:31 CDT)
• AMBER: MM-PBSA: decompose energy error jitrayut jitonnom (Mon Apr 23 2007 - 06:31:43 CDT)
  • Re: AMBER: MM-PBSA: decompose energy error Sergey Samsonov (Mon Apr 23 2007 - 06:56:30 CDT)
• AMBER: MM-PBSA: decompose energy error jitrayut jitonnom (Mon Apr 23 2007 - 06:31:43 CDT)
• AMBER: MM-PBSA: Can't finish the binding energy process jitrayut jitonnom (Mon Apr 23 2007 - 07:34:48 CDT)
  • Re: AMBER: MM-PBSA: Can't finish the binding energy process Navnit Kumar Mishra (Mon Apr 23 2007 - 09:04:12 CDT)
• AMBER: Problem using Ptraj alfredoq_at_fcq.unc.edu.ar (Mon Apr 23 2007 - 10:41:56 CDT)
  • Re: AMBER: Problem using Ptraj j j (Mon Apr 23 2007 - 11:47:50 CDT)
  • Re: AMBER: Problem using Ptraj Thomas Cheatham III (Mon Apr 23 2007 - 12:02:17 CDT)
• AMBER: Problems with AMBER8 on 32-bit FC6 David LeBard (Mon Apr 23 2007 - 13:51:02 CDT)
  • Re: AMBER: Problems with AMBER8 on 32-bit FC6 David A. Case (Mon Apr 23 2007 - 16:17:09 CDT)
    • AMBER: Extracting Coords&MMPBSA&ambpdb Srinivas Odde (Tue Apr 24 2007 - 10:51:48 CDT)
• AMBER: Error on compile amber8 tri nam Vo (Tue Apr 24 2007 - 00:04:34 CDT)
  • Re: AMBER: Error on compile amber8 David LeBard (Tue Apr 24 2007 - 00:45:45 CDT)
    • Re: AMBER: Error on compile amber8 tri nam Vo (Tue Apr 24 2007 - 01:47:27 CDT)
• AMBER: QM/MM simulation with SCC-DFTB ÇÑÀç¹ü (Tue Apr 24 2007 - 03:19:25 CDT)
  • Re: AMBER: QM/MM simulation with SCC-DFTB Gustavo Seabra (Tue Apr 24 2007 - 05:48:11 CDT)
• AMBER: amber equation of ff99 Chengwen Chen (Tue Apr 24 2007 - 11:13:54 CDT)
  • Re: AMBER: amber equation of ff99 Carlos Simmerling (Tue Apr 24 2007 - 11:18:57 CDT)
    • Re: AMBER: amber equation of ff99 Chengwen Chen (Tue Apr 24 2007 - 21:19:15 CDT)
• Re: AMBER:a question about RMSD Carlos Simmerling (Tue Apr 24 2007 - 08:06:40 CDT)
• AMBER: NAD parameters Jardas sucuriba (Tue Apr 24 2007 - 13:02:56 CDT)
  • RE: AMBER: NAD parameters Ross Walker (Tue Apr 24 2007 - 14:32:27 CDT)
    • RE: AMBER: NAD parameters Jardas sucuriba (Wed Apr 25 2007 - 17:46:17 CDT)
• AMBER: mobile proton algorithm HL Eastwood (Tue Apr 24 2007 - 14:25:10 CDT)
• AMBER: Error on compiling AMBER8 tri nam Vo (Tue Apr 24 2007 - 21:03:16 CDT)
  • Re: AMBER: Error on compiling AMBER8 David A. Case (Tue Apr 24 2007 - 22:31:44 CDT)
    • Re: AMBER: Error on compiling AMBER8 tri nam Vo (Wed Apr 25 2007 - 11:35:31 CDT)
      • Re: AMBER: Error on compiling AMBER8 David A. Case (Wed Apr 25 2007 - 13:33:11 CDT)
• AMBER: ptraj error- glibc detected free(): invalid pointer: 0x0812bb38 Ruchi Sachdeva (Tue Apr 24 2007 - 22:54:14 CDT)
  • Re: AMBER: ptraj error- glibc detected free(): invalid pointer: 0x0812bb38 Scott Brozell (Fri Apr 27 2007 - 15:25:23 CDT)
  • Re: AMBER: ptraj error- glibc detected free(): invalid pointer: 0x0812bb38 Bill Ross (Fri Apr 27 2007 - 15:41:20 CDT)
  • Re: AMBER: ptraj error- glibc detected free(): invalid pointer: 0x0812bb38 Bill Ross (Fri Apr 27 2007 - 18:07:54 CDT)
• AMBER: Work with constand pH tri nam Vo (Wed Apr 25 2007 - 03:13:05 CDT)
  • Re: AMBER: Work with constand pH Myunggi Yi (Wed Apr 25 2007 - 08:49:59 CDT)
    • Re: AMBER: Work with constand pH tri nam Vo (Thu Apr 26 2007 - 22:37:53 CDT)
      • Re: AMBER: Work with constand pH Myunggi Yi (Fri Apr 27 2007 - 20:42:32 CDT)
• AMBER: Employing SCC-DFTB with a periodic boundary condtion ÇÑÀç¹ü (Thu Apr 26 2007 - 01:48:58 CDT)
  • Re: AMBER: Employing SCC-DFTB with a periodic boundary condtion Gustavo Seabra (Thu Apr 26 2007 - 08:18:32 CDT)
• AMBER: protein-rna interaction & mmpbsa Antonio Morreale (Thu Apr 26 2007 - 03:28:19 CDT)
• AMBER: Problems installing Amber9 Ângela dos Reis (Fri Apr 27 2007 - 06:14:05 CDT)
  • Re: AMBER: Problems installing Amber9 Andreas Svrcek-Seiler (Fri Apr 27 2007 - 07:52:05 CDT)
  • RE: AMBER: Problems installing Amber9 Ross Walker (Fri Apr 27 2007 - 10:56:41 CDT)
    • Re: AMBER: Problems installing Amber9 Ângela dos Reis (Fri Apr 27 2007 - 12:34:38 CDT)
• AMBER: Error in protonating Neelanjana Sengupta (Fri Apr 27 2007 - 06:31:52 CDT)
  • RE: AMBER: Error in protonating Ross Walker (Fri Apr 27 2007 - 10:46:50 CDT)
  • Re: AMBER: Error in protonating David A. Case (Sat Apr 28 2007 - 16:26:08 CDT)
• AMBER: Print individual free energies in MD trajectories using MM_PBSA Giulio Rastelli (Fri Apr 27 2007 - 11:05:39 CDT)
• AMBER: QM/MM Umbrella sampling Jason DeChancie (Fri Apr 27 2007 - 15:53:08 CDT)
  • RE: AMBER: QM/MM Umbrella sampling Ross Walker (Fri Apr 27 2007 - 17:01:46 CDT)
  • Re: AMBER: QM/MM Umbrella sampling Jerome.GOLEBIOWSKI_at_unice.fr (Sat Apr 28 2007 - 02:55:49 CDT)
• AMBER: thermodynamic integration Servaas Michielssens (Sat Apr 28 2007 - 12:48:10 CDT)
  • Re: AMBER: thermodynamic integration David A. Case (Sat Apr 28 2007 - 16:26:28 CDT)
• AMBER: Binding free energy errors: Grid setting fail jitrayut jitonnom (Sun Apr 29 2007 - 08:48:17 CDT)
• AMBER: a problem of surface area calulated by MM/PBSA Chengwen Chen (Mon Apr 30 2007 - 02:34:38 CDT)
  • Re: AMBER: a problem of surface area calulated by MM/PBSA David A. Case (Mon Apr 30 2007 - 10:20:43 CDT)
• AMBER: Problem with MM-PBSA statistics Henar Martínez García (Mon Apr 30 2007 - 04:53:38 CDT)
  • AMBER: AMBER MINIMIZATION Sophie Barbe (Mon Apr 30 2007 - 08:55:53 CDT)
    • Re: AMBER: AMBER MINIMIZATION David A. Case (Mon Apr 30 2007 - 10:24:34 CDT)
      • Re: AMBER: AMBER MINIMIZATION Sophie Barbe (Mon Apr 30 2007 - 11:23:41 CDT)
    • Re: AMBER: AMBER MINIMIZATION gsciaini_at_qi.fcen.uba.ar (Mon Apr 30 2007 - 16:08:47 CDT)
• AMBER: Problem with calcpka.pl and constant pH Hayden Eastwood (Mon Apr 30 2007 - 06:35:23 CDT)
• AMBER: Problem with calcpka.pl and constant pH Hayden Eastwood (Mon Apr 30 2007 - 08:04:11 CDT)
• AMBER: PDB files Beale, John (Mon Apr 30 2007 - 11:16:59 CDT)
  • RE: AMBER: PDB files Hayden Eastwood (Mon Apr 30 2007 - 12:12:01 CDT)
  • RE: AMBER: PDB files Hayden Eastwood (Mon Apr 30 2007 - 12:20:14 CDT)
  • Re: AMBER: PDB files David A. Case (Mon Apr 30 2007 - 15:00:33 CDT)
• AMBER: pressure tensor in a slab configuration rdauria_at_uci.edu (Mon Apr 30 2007 - 21:16:08 CDT)

Last message date: Mon Dec 31 2007 - 15:27:41 CST
Archived on: Thu Jan 10 2008 - 17:13:09 CST