AMBER Archive (2007)

Subject: AMBER: NAD parameters

From: Jardas sucuriba (jarda_s_at_hotmail.com)
Date: Tue Apr 24 2007 - 13:02:56 CDT

Hi

I am trying to use the parameters developed for NAD by Ross Walker,
downloaded from http://pharmacy.man.ac.uk/amber/cof/NAD_inf.html.
However, when I load all the files in leap, the hydrogens are not added
correctly to the NAD molecule complexed with my protein.
Does anyone have an idea of what is going wrong? Did I miss something?

Thanks
Jardas

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