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AMBER Archive (2007)Subject: AMBER: signal SIGSEGV(11)
From: Pankaj R. Daga (pdaga_at_olemiss.edu)
Dear Amber community,
Greetings.
I am running optimization of one protein-ligand-DNA ternary complex with TIP3P water, in stepwise manner.
After minimizing solvent molecules in first step (which went fine), I am running full system minimization. While running the second minimization, there is sudden crash down of sander. The error I am getting is shown below. Could you please help me to understand, if this error is related to sander or mpi, and how to solve it?
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MPI: On host redwood, Program /usr/local/appl/Amber8/exe/sander, Rank 1, Process 19180 received signal SIGSEGV(11)
MPI: --------stack traceback-------
MPI: -----stack traceback ends-----
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Thanks for your help and support.
Regards
Pankaj
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