AMBER Archive (2007)

Subject: Re: AMBER: NTX=7 ?............lastist= ?...........lastrst= ?????

From: David A. Case (case_at_scripps.edu)
Date: Mon Apr 09 2007 - 12:21:21 CDT

On Mon, Apr 09, 2007, Sandeep Kaushik wrote:

> I have a few questions about the terms used in the benchmark input file in
> AMBER9..
> I want to know what does ntx = 7 stands for (i couldn't find the value "7"
> in NTX parameter ...only upto 6 have been mentioned ..
> and then second question is lastist = 4000000, & lastrst = 5000000, stand
> for what ...
> I couldn't find these values in amber 9 manual..

These are outdated, and ignored in Amber 9. Arguably, the benchmarks inputs
should be updated, but we occasionally want to re-run benchmarks with older
code, so some old input variables have been retained.

...dac

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