AMBER Archive (2009) - Apr 2009 By Date

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Starting: Wed Apr 01 2009 - 02:26:46 CDT
Ending: Thu Apr 30 2009 - 19:37:17 CDT

Re: [AMBER] a layer of water oguz gurbulak (Wed Apr 01 2009 - 02:26:46 CDT)
Re: [AMBER] mm_pbsa problem Giorgos Lamprinidis (Wed Apr 01 2009 - 02:36:53 CDT)
[AMBER] constant-pH: appearance of not titrated residues during the Monte Carlo simulation Therese Malliavin (Wed Apr 01 2009 - 04:06:19 CDT)
[AMBER] run protein with structural Ca+ sarah genare (Wed Apr 01 2009 - 06:01:24 CDT)
Re: [AMBER] Maxwell-Boltzmann distribution and ig=-1 Carlos Simmerling (Wed Apr 01 2009 - 06:01:51 CDT)
[AMBER] Failure to compile amber9 serial ifort gcc Francesco Pietra (Wed Apr 01 2009 - 06:04:18 CDT)
Re: [AMBER] Failure to compile amber9 serial ifort gcc Alessandro Nascimento (Wed Apr 01 2009 - 06:09:42 CDT)
[AMBER] fillratio error in mmpbsa m m (Wed Apr 01 2009 - 06:42:45 CDT)
[AMBER] calculation of Pi-Pi interaction energy aneesh cna (Wed Apr 01 2009 - 07:01:51 CDT)
[AMBER] calculation of Pi-Pi interaction energy Jacopo Sgrignani (Wed Apr 01 2009 - 07:24:28 CDT)
Re: [AMBER] calculation of Pi-Pi interaction energy Jiri Sponer (Wed Apr 01 2009 - 07:38:49 CDT)
Re: [AMBER] ambmol2? David A. Case (Wed Apr 01 2009 - 08:19:00 CDT)
[AMBER] yacc parser Francesco Pietra (Wed Apr 01 2009 - 09:58:01 CDT)
Re: [AMBER] fillratio error in mmpbsa Han Ming (Wed Apr 01 2009 - 10:06:08 CDT)
[AMBER] make test.serial.QMMM michael bane (Wed Apr 01 2009 - 10:44:51 CDT)
[AMBER] ptraj and namd charmm dcd Sandro L. Fornili (Wed Apr 01 2009 - 10:59:37 CDT)
Re: [AMBER] ptraj and namd charmm dcd Thomas Cheatham III (Wed Apr 01 2009 - 11:08:51 CDT)
Re: [AMBER] yacc parser Mark Williamson (Wed Apr 01 2009 - 12:15:56 CDT)
Re: [AMBER] make test.serial.QMMM Seth Hayik (Wed Apr 01 2009 - 12:26:21 CDT)
[AMBER] FF Parameters Transformations ...? Marek Malý (Wed Apr 01 2009 - 12:29:26 CDT)
[AMBER] AmberTools compilation error Kijeong Kwac (Wed Apr 01 2009 - 14:04:00 CDT)
RE: [AMBER] fillratio error in mmpbsa Ray Luo (Wed Apr 01 2009 - 14:24:20 CDT)
Re: [AMBER] AmberTools compilation error Marius Retegan (Wed Apr 01 2009 - 15:03:59 CDT)
[AMBER] Fwd: yacc parser Francesco Pietra (Wed Apr 01 2009 - 15:53:01 CDT)
RE: [AMBER] Problem reading PDB file into XLEAP - SLEAP Hopkins, Robert (Wed Apr 01 2009 - 18:10:44 CDT)
Re: [AMBER] problem with the results in the .out file! Aravind S (Thu Apr 02 2009 - 00:49:19 CDT)
[AMBER] Help: An error happened when I calculate mm/pbsa thirsty (Thu Apr 02 2009 - 03:12:25 CDT)
[AMBER] Umbrella test Arnaud (Thu Apr 02 2009 - 04:51:01 CDT)
[AMBER] please help me out bharat lakhani (Thu Apr 02 2009 - 05:13:48 CDT)
[AMBER] Counter-ions waleed zalloum (Thu Apr 02 2009 - 05:15:12 CDT)
[AMBER] problem in input balaji nagarajan (Thu Apr 02 2009 - 05:29:39 CDT)
RE: [AMBER] problem in input Rausch, Felix (Thu Apr 02 2009 - 06:08:27 CDT)
Re: [AMBER] Failure to compile amber9 serial ifort gcc Francesco Pietra (Thu Apr 02 2009 - 06:16:36 CDT)
Re: [AMBER] Help: An error happened when I calculate mm/pbsa Carlos Simmerling (Thu Apr 02 2009 - 06:19:04 CDT)
[AMBER] number of waters in first and second solvation shell Siddharth Rastogi (Thu Apr 02 2009 - 06:40:21 CDT)
Re: [AMBER] yacc parser David A. Case (Thu Apr 02 2009 - 07:03:06 CDT)
[AMBER] explicit ion with igb=1 Bala subramanian (Thu Apr 02 2009 - 08:39:10 CDT)
Re: [AMBER] explicit ion with igb=1 Carlos Simmerling (Thu Apr 02 2009 - 08:53:54 CDT)
[AMBER] Averaging simulations Naser Alijabbari (Thu Apr 02 2009 - 10:21:41 CDT)
Re: [AMBER] Averaging simulations Carlos Simmerling (Thu Apr 02 2009 - 10:24:28 CDT)
Re: [AMBER] yacc parser Francesco Pietra (Thu Apr 02 2009 - 10:37:53 CDT)
RE: [AMBER] Failure to compile amber9 serial ifort gcc Ross Walker (Thu Apr 02 2009 - 10:45:19 CDT)
Re: [AMBER] Failure to compile amber9 serial ifort gcc Francesco Pietra (Thu Apr 02 2009 - 11:00:46 CDT)
Re: [AMBER] please help me out David A. Case (Thu Apr 02 2009 - 12:48:10 CDT)
[AMBER] Error in trajin and rms Pansy Patel (Thu Apr 02 2009 - 13:58:47 CDT)
[AMBER] parallel installation of amber on sun Per Jr. Greisen (Thu Apr 02 2009 - 14:02:47 CDT)
[AMBER] long polymer chain and image command in ptraj iccy liu (Thu Apr 02 2009 - 14:11:26 CDT)
Re: [AMBER] Error in trajin and rms Carlos Simmerling (Thu Apr 02 2009 - 14:19:39 CDT)
RE: [AMBER] Error in trajin and rms iccy liu (Thu Apr 02 2009 - 14:19:16 CDT)
RE: [AMBER] Error in trajin and rms Pansy Patel (Thu Apr 02 2009 - 14:25:58 CDT)
[AMBER] Contour plot Beale, John (Thu Apr 02 2009 - 14:31:22 CDT)
Re: [AMBER] Contour plot Gustavo Seabra (Thu Apr 02 2009 - 14:47:14 CDT)
Re: [AMBER] parallel installation of amber on sun Atro Tossavainen (Thu Apr 02 2009 - 15:23:05 CDT)
RE: [AMBER] problem in input balaji nagarajan (Thu Apr 02 2009 - 15:23:18 CDT)
Re: [AMBER] parallel installation of amber on sun Per Jr. Greisen (Thu Apr 02 2009 - 15:38:54 CDT)
[AMBER] How to delete the frames at specific intervals Mannan (Thu Apr 02 2009 - 20:16:49 CDT)
[AMBER] How to find out residence time of water molecules Mannan (Thu Apr 02 2009 - 20:52:36 CDT)
Re: [AMBER] How to find out residence time of water molecules Bala subramanian (Fri Apr 03 2009 - 01:12:18 CDT)
Re: [AMBER] Help: An error happened when I calculate mm/pbsa thirsty (Fri Apr 03 2009 - 02:11:19 CDT)
Re: [AMBER] How to find out residence time of water molecules Hannes Loeffler (Fri Apr 03 2009 - 02:31:32 CDT)
RE: [AMBER] problem in input Rausch, Felix (Fri Apr 03 2009 - 03:04:36 CDT)
Re: [AMBER] parallel installation of amber on sun Atro Tossavainen (Fri Apr 03 2009 - 04:39:25 CDT)
Re: [AMBER] How to delete the frames at specific intervals Bala subramanian (Fri Apr 03 2009 - 04:55:35 CDT)
[AMBER] (no subject) chenquan (Fri Apr 03 2009 - 05:12:14 CDT)
Re: [AMBER] parallel installation of amber on sun Per Jr. Greisen (Fri Apr 03 2009 - 05:22:45 CDT)
[AMBER] How to create parameter file for unknown residue nicholus bhattacharjee (Fri Apr 03 2009 - 05:33:03 CDT)
[AMBER] Could not find angle parameter chenquan (Fri Apr 03 2009 - 05:46:47 CDT)
Re: [AMBER] How to create parameter file for unknown residue Marius Retegan (Fri Apr 03 2009 - 05:50:30 CDT)
Re: [AMBER] Could not find angle parameter Marius Retegan (Fri Apr 03 2009 - 05:58:47 CDT)
[AMBER] antechamber & multiple low-energy conformations Alessandro Nascimento (Fri Apr 03 2009 - 07:01:39 CDT)
Re: [AMBER] (no subject) David A. Case (Fri Apr 03 2009 - 07:17:36 CDT)
[AMBER] amber9 serial compilation issues Francesco Pietra (Fri Apr 03 2009 - 13:38:12 CDT)
[AMBER] NALA-ALA-CALA peptide with antechamber Alan (Fri Apr 03 2009 - 11:33:17 CDT)
Re: [AMBER] amber9 serial compilation issues David A. Case (Fri Apr 03 2009 - 15:01:02 CDT)
[AMBER] ptraj problem Ed Pate (Fri Apr 03 2009 - 15:13:37 CDT)
Re: [AMBER] ptraj problem Thomas Cheatham III (Fri Apr 03 2009 - 15:23:21 CDT)
Re: [AMBER] parallel installation of amber on sun Atro Tossavainen (Fri Apr 03 2009 - 16:40:42 CDT)
Re: [AMBER] amber9 serial compilation issues Francesco Pietra (Fri Apr 03 2009 - 17:04:17 CDT)
Re: [AMBER] parallel installation of amber on sun Atro Tossavainen (Fri Apr 03 2009 - 17:33:52 CDT)
[AMBER] Generate AM1-CM2 charges using antechamber Sishi Tang (Fri Apr 03 2009 - 17:36:46 CDT)
[AMBER] parameter for amoeba Hemant Kumar (Sat Apr 04 2009 - 06:46:01 CDT)
Re: [AMBER] problem in installing AMBER10 Dr. Debaprasad Giri (Sat Apr 04 2009 - 07:13:46 CDT)
Re: [AMBER] NALA-ALA-CALA peptide with antechamber David A. Case (Sat Apr 04 2009 - 08:04:32 CDT)
Re: [AMBER] Umbrella test David A. Case (Sat Apr 04 2009 - 08:12:13 CDT)
[AMBER] LYN again Marius Retegan (Sat Apr 04 2009 - 08:12:09 CDT)
Re: [AMBER] constant-pH: appearance of not titrated residues during the Monte Carlo simulation David A. Case (Sat Apr 04 2009 - 08:20:28 CDT)
[AMBER] deffision Nancy (Sat Apr 04 2009 - 09:30:50 CDT)
[AMBER] error in MM PBSA Vikas Sharma (Sat Apr 04 2009 - 12:06:57 CDT)
Re: [AMBER] error in MM PBSA Hemant Gangwar (Sat Apr 04 2009 - 12:08:08 CDT)
Re: [AMBER] error in MM PBSA David A. Case (Sat Apr 04 2009 - 16:16:42 CDT)
[AMBER] error in MM PBSA Vikas Sharma (Sun Apr 05 2009 - 01:09:35 CDT)
Re: [AMBER] LYN again FyD (Sun Apr 05 2009 - 14:24:27 CDT)
[AMBER] error in MM PBSA Vikas Sharma (Sun Apr 05 2009 - 23:27:21 CDT)
Re: [AMBER] FF Parameters Transformations ...? Karl Kirschner (Mon Apr 06 2009 - 02:39:31 CDT)
[AMBER] pmemd compilation/make failed - mkl_vml_service_threader_z_1i_c_1o Vijay Manickam Achari (Mon Apr 06 2009 - 02:27:24 CDT)
[AMBER] sander.MPI parallel run problem Dechang Li (Mon Apr 06 2009 - 02:44:12 CDT)
Re: [AMBER] long polymer chain and image command in ptraj Karl Kirschner (Mon Apr 06 2009 - 03:15:00 CDT)
[AMBER] faulty .rst file with "************" signs for the coordinates of a certain molecule. Soni Mufaddal Saifee (Mon Apr 06 2009 - 04:07:51 CDT)
[AMBER] MM-PBSA error while running heat.in Vikas Sharma (Mon Apr 06 2009 - 04:32:55 CDT)
[AMBER] ssh and make test.parallel Francesco Pietra (Mon Apr 06 2009 - 04:58:39 CDT)
Re: [AMBER] faulty .rst file with "************" signs for the coordinates of a certain molecule. Carlos Simmerling (Mon Apr 06 2009 - 05:07:09 CDT)
Re: [AMBER] sander.MPI parallel run problem Carlos Simmerling (Mon Apr 06 2009 - 05:09:11 CDT)
Re: [AMBER] ssh and make test.parallel Atro Tossavainen (Mon Apr 06 2009 - 05:33:21 CDT)
Re: Re: [AMBER] sander.MPI parallel run problem Dechang Li (Mon Apr 06 2009 - 05:56:53 CDT)
Re: Re: [AMBER] sander.MPI parallel run problem Carlos Simmerling (Mon Apr 06 2009 - 06:02:13 CDT)
Re: Re: Re: [AMBER] sander.MPI parallel run problem Dechang Li (Mon Apr 06 2009 - 06:09:04 CDT)
[AMBER] problem with secstruct action command in ptraj nicholus bhattacharjee (Mon Apr 06 2009 - 06:49:44 CDT)
[AMBER] testing RRR with antechamber Alan (Mon Apr 06 2009 - 07:10:27 CDT)
[AMBER] zwitterionic form of ARG and antechamber Alan (Mon Apr 06 2009 - 07:33:31 CDT)
[AMBER] Amber with AMOEBA force-field Tomasio, Susana (Mon Apr 06 2009 - 07:41:18 CDT)
Re: [AMBER] Amber with AMOEBA force-field David A. Case (Mon Apr 06 2009 - 07:47:11 CDT)
Re: [AMBER] Amber with AMOEBA force-field Wei Zhang (Mon Apr 06 2009 - 07:48:28 CDT)
RE: [AMBER] Amber with AMOEBA force-field Tomasio, Susana (Mon Apr 06 2009 - 07:49:28 CDT)
RE: [AMBER] Amber with AMOEBA force-field Tomasio, Susana (Mon Apr 06 2009 - 07:52:01 CDT)
Re: [AMBER] Amber with AMOEBA force-field Wei Zhang (Mon Apr 06 2009 - 07:55:59 CDT)
Re: [AMBER] Amber with AMOEBA force-field Wei Zhang (Mon Apr 06 2009 - 07:57:21 CDT)
Re: [AMBER] Amber with AMOEBA force-field David A. Case (Mon Apr 06 2009 - 08:00:47 CDT)
RE: [AMBER] Amber with AMOEBA force-field Tomasio, Susana (Mon Apr 06 2009 - 08:14:22 CDT)
[AMBER] Sander waleed_zalloum_at_yahoo.com (Mon Apr 06 2009 - 08:17:34 CDT)
RE: [AMBER] Amber with AMOEBA force-field Tomasio, Susana (Mon Apr 06 2009 - 08:40:49 CDT)
Re: [AMBER] LYN again Marius Retegan (Mon Apr 06 2009 - 08:55:24 CDT)
Re: [AMBER] pmemd compilation/make failed -mkl_vml_service_threader_z_1i_c_1o Robert Duke (Mon Apr 06 2009 - 09:25:14 CDT)
Re: [AMBER] LYN again FyD (Mon Apr 06 2009 - 09:26:14 CDT)
Re: [AMBER] ssh and make test.parallel Francesco Pietra (Mon Apr 06 2009 - 09:29:19 CDT)
[AMBER] MM-PBSA: decompose energy error Lucilla Angeli (Mon Apr 06 2009 - 09:35:58 CDT)
[AMBER] Sander Stalling Steve Seibold (Mon Apr 06 2009 - 11:21:51 CDT)
[AMBER] Do I need to modify the cap residues nicholus bhattacharjee (Mon Apr 06 2009 - 11:45:20 CDT)
Re: [AMBER] Sander Stalling Robert Duke (Mon Apr 06 2009 - 11:57:18 CDT)
RE: [AMBER] Sander Stalling Ross Walker (Mon Apr 06 2009 - 11:58:58 CDT)
RE: [AMBER] Do I need to modify the cap residues Ross Walker (Mon Apr 06 2009 - 12:00:05 CDT)
[AMBER] sequence function taufik.alsarraj_at_utoronto.ca (Mon Apr 06 2009 - 12:03:20 CDT)
Re: [AMBER] sequence function taufik.alsarraj_at_utoronto.ca (Mon Apr 06 2009 - 12:06:50 CDT)
Re: [AMBER] Do I need to modify the cap residues nicholus bhattacharjee (Mon Apr 06 2009 - 12:19:41 CDT)
[AMBER] Negative "number of measurements" in PTRAJ Jenny Iskrenova (Mon Apr 06 2009 - 12:28:59 CDT)
Re: [AMBER] Do I need to modify the cap residues David A. Case (Mon Apr 06 2009 - 13:57:02 CDT)
Re: [AMBER] FF Parameters Transformations ...? Marek Malý (Mon Apr 06 2009 - 15:03:58 CDT)
Re: [AMBER] ssh and make test.parallel Atro Tossavainen (Mon Apr 06 2009 - 15:21:07 CDT)
[AMBER] number_rec_numbers in mm_pbsa Zhu, Yong-Liang (Mon Apr 06 2009 - 18:52:06 CDT)
å›žå¤ï¼š [AMBER] number_rec_numbers in mm_pbsa å»–é’åŽ (Mon Apr 06 2009 - 19:18:54 CDT)
[AMBER] Amber on GPU Sasha Buzko (Mon Apr 06 2009 - 19:56:31 CDT)
RE: [AMBER] Amber on GPU Ross Walker (Mon Apr 06 2009 - 20:14:07 CDT)
[AMBER] deffision coefficient Nancy (Mon Apr 06 2009 - 20:18:32 CDT)
[AMBER] A question about SMD force constant Jackie. J. Shen (Mon Apr 06 2009 - 20:40:13 CDT)
Re: [AMBER] deffision coefficient David A. Case (Mon Apr 06 2009 - 21:16:39 CDT)
Re: [AMBER] pmemd compilation/make failed -mkl_vml_service_threader_z_1i_c_1o Vijay Manickam Achari (Mon Apr 06 2009 - 23:25:36 CDT)
[AMBER] ambmask question Ed Pate (Mon Apr 06 2009 - 23:36:40 CDT)
Re: [AMBER] Do I need to modify the cap residues nicholus bhattacharjee (Mon Apr 06 2009 - 23:51:22 CDT)
RE: [AMBER] Do I need to modify the cap residues Ross Walker (Mon Apr 06 2009 - 23:59:37 CDT)
Re: [AMBER] Amber on GPU Sasha Buzko (Tue Apr 07 2009 - 01:11:24 CDT)
[AMBER] Problems with running two separate jobs in the same time Antonija TomiÄ‡ (Tue Apr 07 2009 - 03:08:53 CDT)
[AMBER] how to add charge in metal ion bharat lakhani (Tue Apr 07 2009 - 04:11:23 CDT)
[AMBER] missing violations of the covalent geometry Helena P M Tossavainen (Tue Apr 07 2009 - 04:36:44 CDT)
[AMBER] errors while testing Per Jr. Greisen (Tue Apr 07 2009 - 05:00:19 CDT)
[AMBER] Problem with CAP residues Tomasio, Susana (Tue Apr 07 2009 - 05:17:27 CDT)
Re: [AMBER] errors while testing Atro Tossavainen (Tue Apr 07 2009 - 05:18:08 CDT)
Re: [AMBER] A question about SMD force constant Carlos Simmerling (Tue Apr 07 2009 - 05:32:09 CDT)
Re: [AMBER] Problem with CAP residues FyD (Tue Apr 07 2009 - 06:01:35 CDT)
Re: [AMBER] missing violations of the covalent geometry David A. Case (Tue Apr 07 2009 - 06:10:42 CDT)
[AMBER] TI production runs stop after a certain Step number Hannes Wallnoefer (Tue Apr 07 2009 - 06:48:45 CDT)
Re: [AMBER] missing violations of the covalent geometry Helena P M Tossavainen (Tue Apr 07 2009 - 07:10:16 CDT)
Re: [AMBER] pmemd compilation/make failed-mkl_vml_service_threader_z_1i_c_1o Robert Duke (Tue Apr 07 2009 - 07:43:36 CDT)
Re: [AMBER] pmemd compilation/makefailed-mkl_vml_service_threader_z_1i_c_1o Robert Duke (Tue Apr 07 2009 - 07:55:00 CDT)
[AMBER] problem in calculation of binding energy in final step (MM-PBSA) Maryam Hamzehee (Tue Apr 07 2009 - 08:59:03 CDT)
Re: [AMBER] TI production runs stop after a certain Step number steinbrt_at_rci.rutgers.edu (Tue Apr 07 2009 - 09:49:57 CDT)
RE: [AMBER] Problems with running two separate jobs in the same time Ross Walker (Tue Apr 07 2009 - 10:01:14 CDT)
RE: [AMBER] how to add charge in metal ion Ross Walker (Tue Apr 07 2009 - 10:01:14 CDT)
[AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Tue Apr 07 2009 - 10:16:08 CDT)
Re: [AMBER] test/amoeba - forrtl: severe (64): input conversion error David A. Case (Tue Apr 07 2009 - 11:29:18 CDT)
RE: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Tue Apr 07 2009 - 11:34:57 CDT)
Re: [AMBER] Negative "number of measurements" in PTRAJ Thomas Cheatham (Tue Apr 07 2009 - 11:57:28 CDT)
Re: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Wei Zhang (Tue Apr 07 2009 - 13:34:11 CDT)
[AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Tue Apr 07 2009 - 13:56:25 CDT)
Re: [AMBER] TI production runs stop after a certain Step number Ilyas Yildirim (Tue Apr 07 2009 - 14:08:31 CDT)
[AMBER] PBSA Radii option quantum_mania_at_yahoo.com (Tue Apr 07 2009 - 14:31:18 CDT)
RE: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Tue Apr 07 2009 - 14:34:26 CDT)
Re: [AMBER] specification of antechamber AC file format? Nicholas Musolino (Tue Apr 07 2009 - 14:43:57 CDT)
[AMBER] Source of new CYX residue parameters in ff03ua Chris Moth (Tue Apr 07 2009 - 14:48:46 CDT)
[AMBER] prmtop residue format taufik.alsarraj_at_utoronto.ca (Tue Apr 07 2009 - 15:04:25 CDT)
RE: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Tue Apr 07 2009 - 15:12:19 CDT)
Re: [AMBER] prmtop residue format David A. Case (Tue Apr 07 2009 - 15:35:40 CDT)
Re: [AMBER] test/amoeba - forrtl: severe (64): input conversion error David A. Case (Tue Apr 07 2009 - 15:41:21 CDT)
Re: [AMBER] top2mol2 taufik.alsarraj_at_utoronto.ca (Tue Apr 07 2009 - 17:39:34 CDT)
RE: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Tue Apr 07 2009 - 17:45:57 CDT)
[AMBER] ptraj randomizeions taufik.alsarraj_at_utoronto.ca (Tue Apr 07 2009 - 18:32:23 CDT)
[AMBER] MMPB(GB)SA on trimer quantum_mania_at_yahoo.com (Tue Apr 07 2009 - 20:01:39 CDT)
Re: [AMBER] faulty .rst file with "************" signs for the coordinates of a certain molecule. Soni Mufaddal Saifee (Tue Apr 07 2009 - 23:19:25 CDT)
Re: [AMBER] pmemd compilation/makefailed-mkl_vml_service_threader_z_1i_c_1o Vijay Manickam Achari (Wed Apr 08 2009 - 01:27:46 CDT)
[AMBER] compare MMPBSA result m m (Wed Apr 08 2009 - 01:28:06 CDT)
[AMBER] problem with antechamber aneesh cna (Wed Apr 08 2009 - 01:32:32 CDT)
Re: [AMBER] ssh and make test.parallel Francesco Pietra (Wed Apr 08 2009 - 02:19:36 CDT)
[AMBER] please help me out bharat lakhani (Wed Apr 08 2009 - 04:18:41 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 04:35:17 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Wed Apr 08 2009 - 05:03:09 CDT)
Re: [AMBER] errors while testing Per Jr. Greisen (Wed Apr 08 2009 - 06:06:40 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 06:20:27 CDT)
Re: [AMBER] TI production runs stop after a certain Step number Hannes Wallnoefer (Wed Apr 08 2009 - 06:48:31 CDT)
Re: [AMBER] pmemdcompilation/makefailed-mkl_vml_service_threader_z_1i_c_1o Robert Duke (Wed Apr 08 2009 - 07:13:23 CDT)
Re: [AMBER] pmemdcompilation/makefailed-mkl_vml_service_threader_z_1i_c_1o Robert Duke (Wed Apr 08 2009 - 08:35:49 CDT)
Re: [AMBER] TI production runs stop after a certain Step number steinbrt_at_rci.rutgers.edu (Wed Apr 08 2009 - 09:35:11 CDT)
RE: [AMBER] pmemdcompilation/makefailed-mkl_vml_service_threade_z_1i_c_1o Ross Walker (Wed Apr 08 2009 - 09:53:31 CDT)
Re: [AMBER] TI production runs stop after a certain Step number Hannes Wallnoefer (Wed Apr 08 2009 - 10:14:32 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Wed Apr 08 2009 - 10:14:43 CDT)
Fwd: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Wed Apr 08 2009 - 10:23:58 CDT)
RE: [AMBER] please help me out Ross Walker (Wed Apr 08 2009 - 10:34:51 CDT)
Re: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Wei Zhang (Wed Apr 08 2009 - 10:38:50 CDT)
[AMBER] Failures of tests Per Jr. Greisen (Wed Apr 08 2009 - 10:41:34 CDT)
Re: [AMBER] please help me out Hugh Heldenbrand (Wed Apr 08 2009 - 10:44:54 CDT)
RE: [AMBER] Failures of tests Seetin, Matthew (Wed Apr 08 2009 - 10:57:27 CDT)
RE: [AMBER] test/amoeba - forrtl: severe (64): input conversion error Tomasio, Susana (Wed Apr 08 2009 - 11:02:48 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so M. L. Dodson (Wed Apr 08 2009 - 11:06:09 CDT)
Re: [AMBER] Failures of tests Per Jr. Greisen (Wed Apr 08 2009 - 11:17:16 CDT)
RE: [AMBER] compare MMPBSA result Ray Luo (Wed Apr 08 2009 - 12:02:41 CDT)
Re: [AMBER] please help me out David A. Case (Wed Apr 08 2009 - 13:10:04 CDT)
[AMBER] Thermodynamic Integration and belly Ignacio J. General (Wed Apr 08 2009 - 14:52:51 CDT)
[AMBER] ntwr taufik.alsarraj_at_utoronto.ca (Wed Apr 08 2009 - 16:45:01 CDT)
Re: [AMBER] ntwr Carlos Simmerling (Wed Apr 08 2009 - 16:47:04 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 17:24:52 CDT)
Re: Fwd: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 17:25:54 CDT)
Re: [AMBER] ntwr taufik.alsarraj_at_utoronto.ca (Wed Apr 08 2009 - 17:35:57 CDT)
Re: [AMBER] Failures of tests Atro Tossavainen (Wed Apr 08 2009 - 17:43:08 CDT)
Re: [AMBER] ntwr Carlos Simmerling (Wed Apr 08 2009 - 17:45:57 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Wed Apr 08 2009 - 18:17:38 CDT)
Re: Fwd: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Wed Apr 08 2009 - 18:20:02 CDT)
Re: Fwd: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 18:36:53 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Atro Tossavainen (Wed Apr 08 2009 - 18:39:30 CDT)
[AMBER] force fields Mark M Huntress (Wed Apr 08 2009 - 19:23:38 CDT)
RE: [AMBER] force fields Ross Walker (Wed Apr 08 2009 - 19:36:05 CDT)
[AMBER] please help me out bharat lakhani (Thu Apr 09 2009 - 00:10:22 CDT)
[AMBER] how to plot this kind of map? lnin_1431_at_sina.com (Thu Apr 09 2009 - 03:36:45 CDT)
Re: [AMBER] how to plot this kind of map? Dechang Li (Thu Apr 09 2009 - 03:46:16 CDT)
RE: [AMBER] pmemdcompilation/makefailed-mkl_vml_service_threade_z_1i_c_1o Vijay Manickam Achari (Thu Apr 09 2009 - 04:55:53 CDT)
[AMBER] hpux sander.serial failure info Yiannis Georgiadis (Thu Apr 09 2009 - 17:28:28 CDT)
RE: [AMBER] Problems with running two separate jobs in the same time Antonija TomiÄ‡ (Thu Apr 09 2009 - 05:33:03 CDT)
Re: [AMBER] please help me out David A. Case (Thu Apr 09 2009 - 06:46:12 CDT)
Re: [AMBER] hpux sander.serial failure info David A. Case (Thu Apr 09 2009 - 06:56:51 CDT)
Re: [AMBER] Failures of tests Per Jr. Greisen (Thu Apr 09 2009 - 07:52:32 CDT)
[AMBER] RST file waleed zalloum (Thu Apr 09 2009 - 09:06:37 CDT)
[AMBER] Release of R.E.D. Server FyD (Thu Apr 09 2009 - 03:31:30 CDT)
[AMBER] antechamber problems Jia Xu (Thu Apr 09 2009 - 12:12:44 CDT)
Re: [AMBER] antechamber problems David A. Case (Thu Apr 09 2009 - 13:04:51 CDT)
Re: [AMBER] antechamber problems Nicholas Musolino (Thu Apr 09 2009 - 13:03:45 CDT)
[AMBER] Sander and multiple residues Dan Kaps (Thu Apr 09 2009 - 13:48:55 CDT)
Re: [AMBER] Sander and multiple residues Carlos Simmerling (Thu Apr 09 2009 - 14:21:56 CDT)
Re: [AMBER] Sander and multiple residues Dan Kaps (Thu Apr 09 2009 - 15:02:46 CDT)
Re: [AMBER] Sander and multiple residues Carlos Simmerling (Thu Apr 09 2009 - 15:05:23 CDT)
Re: [AMBER] Sander and multiple residues Bill Ross (Thu Apr 09 2009 - 15:12:10 CDT)
[AMBER] igb=0 vs. igb=6 give different answers Hugh Heldenbrand (Thu Apr 09 2009 - 15:51:02 CDT)
Re: [AMBER] Amber on GPU Sasha Buzko (Thu Apr 09 2009 - 19:54:29 CDT)
Re: [AMBER] igb=0 vs. igb=6 give different answers David A. Case (Thu Apr 09 2009 - 21:48:31 CDT)
[AMBER] basepair balaji nagarajan (Fri Apr 10 2009 - 00:30:57 CDT)
Re: [AMBER] RST file David A. Case (Fri Apr 10 2009 - 07:21:19 CDT)
Re: [AMBER] Sander and multiple residues Dan Kaps (Fri Apr 10 2009 - 07:56:53 CDT)
Re: [AMBER] Sander and multiple residues Dan Kaps (Fri Apr 10 2009 - 07:57:54 CDT)
Re: [AMBER] Sander and multiple residues David A. Case (Fri Apr 10 2009 - 09:03:57 CDT)
Re: [AMBER] antechamber problems Jia Xu (Fri Apr 10 2009 - 09:41:53 CDT)
Re: [AMBER] Sander and multiple residues Dan Kaps (Fri Apr 10 2009 - 10:01:08 CDT)
Re: [AMBER] Sander and multiple residues Bill Ross (Fri Apr 10 2009 - 11:42:36 CDT)
Re: [AMBER] Sander and multiple residues Dan Kaps (Fri Apr 10 2009 - 12:46:49 CDT)
Re: [AMBER] Sander and multiple residues Bill Ross (Fri Apr 10 2009 - 15:42:14 CDT)
[AMBER] ptraj (vector and corrplane) taufik.alsarraj_at_utoronto.ca (Fri Apr 10 2009 - 19:45:46 CDT)
[AMBER] Amber 1.2 tools test suite failure? Jim Parker (Sat Apr 11 2009 - 12:41:54 CDT)
RE: [AMBER] Amber 1.2 tools test suite failure? Ross Walker (Sat Apr 11 2009 - 13:00:45 CDT)
Re: [AMBER] Solved-Amber 1.2 tools test suite failure Jim Parker (Sat Apr 11 2009 - 14:29:55 CDT)
RE: [AMBER] Solved-Amber 1.2 tools test suite failure Ross Walker (Sat Apr 11 2009 - 14:51:13 CDT)
[AMBER] install and test Amber 10 parallel on Ubuntu 8.10 Jim Parker (Sat Apr 11 2009 - 19:20:25 CDT)
[AMBER] MD on GPU: an existing commercial implementation Sasha Buzko (Sat Apr 11 2009 - 19:47:46 CDT)
[AMBER] Re: install and test Amber 10 parallel on Ubuntu 8.10 Jim Parker (Sat Apr 11 2009 - 23:47:19 CDT)
[AMBER] why amber10/dat/leap/gleap/ and amber10/dat/leap/parm Alan (Sun Apr 12 2009 - 04:30:15 CDT)
Re: [AMBER] why amber10/dat/leap/gleap/ and amber10/dat/leap/parm Wei Zhang (Sun Apr 12 2009 - 08:24:47 CDT)
Re: [AMBER] why amber10/dat/leap/gleap/ and amber10/dat/leap/parm Alan (Sun Apr 12 2009 - 10:58:18 CDT)
[AMBER] problem with explicit solvent in TMD balaji nagarajan (Mon Apr 13 2009 - 06:37:21 CDT)
Re: [AMBER] problem with explicit solvent in TMD Carlos Simmerling (Mon Apr 13 2009 - 06:41:41 CDT)
[AMBER] Energy minimisation and NaN vivek.viv.sharma_at_gmail.com (Mon Apr 13 2009 - 06:55:55 CDT)
[AMBER] atom types in pdb files Dan Kaps (Mon Apr 13 2009 - 09:23:58 CDT)
[AMBER] Thermodynamic Integration and belly Ignacio J. General (Mon Apr 13 2009 - 10:24:15 CDT)
RE: [AMBER] problem with explicit solvent in TMD Ross Walker (Mon Apr 13 2009 - 10:29:11 CDT)
RE: [AMBER] atom types in pdb files Kristina Furse (Mon Apr 13 2009 - 11:30:05 CDT)
Re: [AMBER] Thermodynamic Integration and belly steinbrt_at_rci.rutgers.edu (Mon Apr 13 2009 - 11:46:19 CDT)
Re: [AMBER] Thermodynamic Integration and belly Ignacio J. General (Mon Apr 13 2009 - 12:26:16 CDT)
Re: [AMBER] Energy minimisation and NaN David A. Case (Mon Apr 13 2009 - 14:28:10 CDT)
Re: [AMBER] atom types in pdb files Dan Kaps (Mon Apr 13 2009 - 14:29:43 CDT)
[AMBER] error saving prmtop and inpcrd files of complex in MM-PBSA Vikas Sharma (Mon Apr 13 2009 - 15:11:07 CDT)
Re: [AMBER] atom types in pdb files David A. Case (Mon Apr 13 2009 - 15:25:04 CDT)
[AMBER] restrained minimization quantum_mania_at_yahoo.com (Mon Apr 13 2009 - 19:12:35 CDT)
Re: [AMBER] restrained minimization David A. Case (Mon Apr 13 2009 - 21:03:11 CDT)
[AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Marek Malý (Mon Apr 13 2009 - 22:29:17 CDT)
RE: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Ross Walker (Mon Apr 13 2009 - 23:10:38 CDT)
[AMBER] chosing complex in amber Vikas Sharma (Tue Apr 14 2009 - 00:18:43 CDT)
Re: [AMBER] basepair Bala subramanian (Tue Apr 14 2009 - 06:09:21 CDT)
Re: [AMBER] how to add charge in metal ion bharat lakhani (Tue Apr 14 2009 - 07:49:44 CDT)
[AMBER] Questions on targeted MD with explicit solvent Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Tue Apr 14 2009 - 08:51:40 CDT)
[AMBER] [qm/mm] qmcharge for acidic a.a. in proteins sychen (Tue Apr 14 2009 - 11:33:03 CDT)
[AMBER] antechamber and wrong net charge with gasteiger method Alan (Tue Apr 14 2009 - 12:41:30 CDT)
Re: [AMBER] antechamber and wrong net charge with gasteiger method David A. Case (Tue Apr 14 2009 - 13:42:14 CDT)
RE: [AMBER] [qm/mm] qmcharge for acidic a.a. in proteins Ross Walker (Tue Apr 14 2009 - 14:45:06 CDT)
[AMBER] my FF m m (Tue Apr 14 2009 - 17:21:38 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Marek Malý (Tue Apr 14 2009 - 18:18:18 CDT)
RE: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Ross Walker (Tue Apr 14 2009 - 18:27:37 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Marek Malý (Tue Apr 14 2009 - 19:40:22 CDT)
[AMBER] Source of new CYX residue parameters in ff03ua Chris Moth (Tue Apr 14 2009 - 19:42:33 CDT)
[AMBER] water bonding with protein Mark M Huntress (Tue Apr 14 2009 - 21:55:39 CDT)
RE: [AMBER] Source of new CYX residue parameters in ff03ua Ross Walker (Tue Apr 14 2009 - 23:08:14 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Karl Kirschner (Wed Apr 15 2009 - 02:07:00 CDT)
[AMBER] hbond_ptraj_eror balaji nagarajan (Wed Apr 15 2009 - 01:53:29 CDT)
Re: [AMBER] hpux sander.serial failure info Yiannis Georgiadis (Wed Apr 15 2009 - 16:41:06 CDT)
Re: [AMBER] water bonding with protein David A. Case (Wed Apr 15 2009 - 06:58:17 CDT)
Re: [AMBER] hpux sander.serial failure info David A. Case (Wed Apr 15 2009 - 07:07:45 CDT)
[AMBER] mean of character in frcmod.ff03 chenquan (Wed Apr 15 2009 - 07:26:38 CDT)
Re: [AMBER] my FF David A. Case (Wed Apr 15 2009 - 07:28:16 CDT)
Re: [AMBER] force fields Gustavo Seabra (Wed Apr 15 2009 - 07:43:49 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Carlos Simmerling (Wed Apr 15 2009 - 08:33:00 CDT)
RE: [AMBER] mean of character in frcmod.ff03 Ross Walker (Wed Apr 15 2009 - 09:58:31 CDT)
[AMBER] help- regarding - TMD balaji nagarajan (Wed Apr 15 2009 - 11:19:59 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Wed Apr 15 2009 - 12:56:07 CDT)
Re: [AMBER] specification of antechamber AC file format? Nicholas Musolino (Wed Apr 15 2009 - 17:07:32 CDT)
RE: [AMBER] mean of character in frcmod.ff03 chenquan (Wed Apr 15 2009 - 18:36:32 CDT)
RE: [AMBER] help- regarding - TMD balaji nagarajan (Thu Apr 16 2009 - 00:21:26 CDT)
[AMBER] please help me out bharat lakhani (Thu Apr 16 2009 - 01:41:08 CDT)
[AMBER] missing amber force field parameters Neha Gandhi (Thu Apr 16 2009 - 04:19:57 CDT)
Re: [AMBER] missing amber force field parameters FyD (Thu Apr 16 2009 - 04:41:44 CDT)
[AMBER] pmemd in amber10 - compile failed in HPC Vijay Manickam Achari (Thu Apr 16 2009 - 05:13:49 CDT)
[AMBER] 1-4 vdW, GB MM difference Jimmy Heimdal (Thu Apr 16 2009 - 06:57:01 CDT)
Re: [AMBER] pmemd in amber10 - compile failed in HPC Robert Duke (Thu Apr 16 2009 - 07:24:45 CDT)
Re: [AMBER] specification of antechamber AC file format? David A. Case (Thu Apr 16 2009 - 07:29:46 CDT)
[AMBER] ambertools failed - SMP IA64 Vijay Manickam Achari (Thu Apr 16 2009 - 08:17:34 CDT)
Re: [AMBER] specification of antechamber AC file format? Nicholas Musolino (Thu Apr 16 2009 - 08:18:32 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Thu Apr 16 2009 - 08:30:22 CDT)
Re: [AMBER] ambertools failed - SMP IA64 David A. Case (Thu Apr 16 2009 - 09:10:20 CDT)
[AMBER] Van der Waals atom types Antonio Morreale (Thu Apr 16 2009 - 09:39:14 CDT)
Re: [AMBER] 1-4 vdW, GB MM difference David A. Case (Thu Apr 16 2009 - 09:47:55 CDT)
[AMBER] Amber and CHARMM summer school David A. Case (Thu Apr 16 2009 - 10:04:18 CDT)
[AMBER] Bad value during integer read by sander Collins Nganou (Thu Apr 16 2009 - 10:09:45 CDT)
[AMBER] sulfonamide parameters valeria.lapietra_at_unina.it (Thu Apr 16 2009 - 10:16:49 CDT)
RE: [AMBER] help- regarding - TMD balaji nagarajan (Thu Apr 16 2009 - 12:01:39 CDT)
[AMBER] polarizable force field for 18-crown-6 Gert von Helden (Thu Apr 16 2009 - 12:33:15 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Marek Malý (Thu Apr 16 2009 - 16:25:12 CDT)
[AMBER] help regarding force fields Vikas Sharma (Fri Apr 17 2009 - 01:06:32 CDT)
[AMBER] Right force fields Vikas Sharma (Fri Apr 17 2009 - 01:22:16 CDT)
Re: [AMBER] polarizable force field for 18-crown-6 Piotr Cieplak (Fri Apr 17 2009 - 02:48:03 CDT)
[AMBER] radius of gyration Beale, John (Fri Apr 17 2009 - 06:39:31 CDT)
Re: [AMBER] Right force fields Patrick Schopf (Fri Apr 17 2009 - 07:48:14 CDT)
Re: [AMBER] Right force fields Vikas Sharma (Fri Apr 17 2009 - 08:14:04 CDT)
Re: [AMBER] Right force fields Patrick Schopf (Fri Apr 17 2009 - 08:34:04 CDT)
[AMBER] Density in MD simulation Ibrahim Moustafa (Fri Apr 17 2009 - 11:09:16 CDT)
Re: [AMBER] Density in MD simulation Carlos Simmerling (Fri Apr 17 2009 - 11:10:51 CDT)
[AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? quantum_mania_at_yahoo.com (Fri Apr 17 2009 - 12:52:28 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? Lachele Foley (Lists) (Fri Apr 17 2009 - 13:13:49 CDT)
Re: [AMBER] Density in MD simulation Ibrahim Moustafa (Fri Apr 17 2009 - 18:26:46 CDT)
[AMBER] Backbone restraint Rilei Yu (Fri Apr 17 2009 - 21:30:38 CDT)
Re: [AMBER] Backbone restraint Carlos Simmerling (Fri Apr 17 2009 - 21:35:26 CDT)
Re: [AMBER] Backbone restraint Rilei Yu (Fri Apr 17 2009 - 22:29:12 CDT)
[AMBER] help_me to know the reason balaji nagarajan (Fri Apr 17 2009 - 23:30:07 CDT)
[AMBER] please read this mail bharat lakhani (Sat Apr 18 2009 - 02:38:12 CDT)
Re: [AMBER] help_me to know the reason Carlos Simmerling (Sat Apr 18 2009 - 05:53:50 CDT)
Re: [AMBER] Backbone restraint Carlos Simmerling (Sat Apr 18 2009 - 06:08:39 CDT)
Re: [AMBER] please read this mail David A. Case (Sat Apr 18 2009 - 08:01:08 CDT)
[AMBER] about saltcon zgong.hust (Sat Apr 18 2009 - 21:45:53 CDT)
[AMBER] Atom type error Vikas Sharma (Sun Apr 19 2009 - 04:48:01 CDT)
Re: [AMBER] about saltcon Carlos Simmerling (Sun Apr 19 2009 - 05:49:57 CDT)
Re: [AMBER] Atom type error nicholus bhattacharjee (Sun Apr 19 2009 - 05:55:37 CDT)
Re: [AMBER] Atom type error Carlos Simmerling (Sun Apr 19 2009 - 06:06:07 CDT)
Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so Francesco Pietra (Sun Apr 19 2009 - 09:36:02 CDT)
Re: [AMBER] Atom type error Vikas Sharma (Sun Apr 19 2009 - 11:49:53 CDT)
Re: [AMBER] Atom type error Vikas Sharma (Sun Apr 19 2009 - 11:50:28 CDT)
Re: [AMBER] Atom type error David A. Case (Sun Apr 19 2009 - 12:41:11 CDT)
Re: [AMBER] Atom type error Vikas Sharma (Sun Apr 19 2009 - 13:33:36 CDT)
RE: [AMBER] Atom type error Ross Walker (Sun Apr 19 2009 - 16:23:38 CDT)
Re: [AMBER] Atom type error Vikas Sharma (Mon Apr 20 2009 - 05:46:34 CDT)
[AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Marek Malý (Mon Apr 20 2009 - 06:52:36 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Karl Kirschner (Mon Apr 20 2009 - 07:27:45 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail FyD (Mon Apr 20 2009 - 09:50:12 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Mon Apr 20 2009 - 10:05:38 CDT)
Re: [AMBER] help- regarding - TMD Carlos Simmerling (Mon Apr 20 2009 - 10:12:40 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Mon Apr 20 2009 - 10:28:30 CDT)
Re: [AMBER] help- regarding - TMD Carlos Simmerling (Mon Apr 20 2009 - 10:30:52 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Mon Apr 20 2009 - 11:21:06 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Mon Apr 20 2009 - 12:31:52 CDT)
Re: [AMBER] Creating conditions for biased MD Carlos Simmerling (Mon Apr 20 2009 - 13:46:41 CDT)
[AMBER] Partial interactions Ignacio J. General (Mon Apr 20 2009 - 16:07:24 CDT)
Re: [AMBER] Partial interactions steinbrt_at_rci.rutgers.edu (Mon Apr 20 2009 - 16:47:35 CDT)
Re: Re: [AMBER] Backbone restraint Jackie. J. Shen (Mon Apr 20 2009 - 20:12:13 CDT)
Re: Re: [AMBER] Backbone restraint Rilei Yu (Mon Apr 20 2009 - 20:21:09 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Marek Malý (Mon Apr 20 2009 - 22:52:46 CDT)
[AMBER] My step size Vikas Sharma (Tue Apr 21 2009 - 01:50:16 CDT)
Re: [AMBER] Atom type error Vikas Sharma (Tue Apr 21 2009 - 01:55:24 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Karl Kirschner (Tue Apr 21 2009 - 02:24:18 CDT)
[AMBER] atom numbers Vikas Sharma (Tue Apr 21 2009 - 06:12:27 CDT)
RE: [AMBER] My step size Ross Walker (Tue Apr 21 2009 - 06:27:07 CDT)
Re: [AMBER] atom numbers David A. Case (Tue Apr 21 2009 - 06:54:37 CDT)
Re: [AMBER] Partial interactions Ignacio J. General (Tue Apr 21 2009 - 09:31:26 CDT)
Re: [AMBER] My step size Vikas Sharma (Tue Apr 21 2009 - 10:01:25 CDT)
Re: [AMBER] Partial interactions steinbrt_at_rci.rutgers.edu (Tue Apr 21 2009 - 10:17:55 CDT)
[AMBER] Number of LES copies in ptraj Thomas Exner (Tue Apr 21 2009 - 10:28:41 CDT)
Re: [AMBER] atom numbers Vikas Sharma (Tue Apr 21 2009 - 10:33:12 CDT)
Re: [AMBER] atom numbers David A. Case (Tue Apr 21 2009 - 10:52:22 CDT)
Re: [AMBER] atom numbers Vikas Sharma (Tue Apr 21 2009 - 11:58:41 CDT)
Re: [AMBER] atom numbers Vikas Sharma (Tue Apr 21 2009 - 12:15:07 CDT)
Re: [AMBER] atom numbers David A. Case (Tue Apr 21 2009 - 12:26:32 CDT)
Re: [AMBER] atom numbers Vikas Sharma (Tue Apr 21 2009 - 13:36:35 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Tue Apr 21 2009 - 13:40:35 CDT)
Re: [AMBER] Creating conditions for biased MD Carlos Simmerling (Tue Apr 21 2009 - 14:44:03 CDT)
Re: [AMBER] help- regarding - TMD Carlos Simmerling (Tue Apr 21 2009 - 14:46:41 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Tue Apr 21 2009 - 15:25:15 CDT)
Re: [AMBER] help- regarding - TMD Carlos Simmerling (Tue Apr 21 2009 - 16:23:23 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Tue Apr 21 2009 - 16:29:36 CDT)
Re: [AMBER] Creating conditions for biased MD Carlos Simmerling (Tue Apr 21 2009 - 16:32:09 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Tue Apr 21 2009 - 16:49:14 CDT)
[AMBER] Set start timestep for mdcrd traj output quantum_mania_at_yahoo.com (Tue Apr 21 2009 - 11:38:53 CDT)
[AMBER] Set start timestep for mdcrd traj output quantum_mania_at_yahoo.com (Tue Apr 21 2009 - 11:31:45 CDT)
RE: [AMBER] help- regarding - TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Tue Apr 21 2009 - 17:40:36 CDT)
[AMBER] Flexible ring simulation Dong Xu (Tue Apr 21 2009 - 18:04:55 CDT)
Re: [AMBER] Set start timestep for mdcrd traj output Carlos Simmerling (Tue Apr 21 2009 - 18:26:02 CDT)
Re: [AMBER] help- regarding - TMD Carlos Simmerling (Tue Apr 21 2009 - 18:35:42 CDT)
[AMBER] per atom energies in sander/pmemd Tamara Rogers (Tue Apr 21 2009 - 18:41:27 CDT)
Re: [AMBER] Set start timestep for mdcrd traj output Dong Xu (Tue Apr 21 2009 - 18:44:50 CDT)
[AMBER] Disulfide bond Dong Xu (Tue Apr 21 2009 - 20:37:46 CDT)
Re: [AMBER] Disulfide bond Wei Zhang (Tue Apr 21 2009 - 20:46:19 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Marek Malý (Tue Apr 21 2009 - 21:31:34 CDT)
Re: [AMBER] Disulfide bond Dong Xu (Tue Apr 21 2009 - 21:41:02 CDT)
Re: [AMBER] Disulfide bond Wei Zhang (Tue Apr 21 2009 - 22:30:36 CDT)
Re: [AMBER] My step size Vikas Sharma (Tue Apr 21 2009 - 23:49:47 CDT)
Re: [AMBER] Disulfide bond quantum_mania_at_yahoo.com (Wed Apr 22 2009 - 00:25:45 CDT)
[AMBER] bintraj and amber 10 Naser Alijabbari (Wed Apr 22 2009 - 01:31:51 CDT)
[AMBER] help regarding step size Vikas Sharma (Wed Apr 22 2009 - 03:57:31 CDT)
Re: [AMBER] help regarding step size Carlos Simmerling (Wed Apr 22 2009 - 05:13:54 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Wed Apr 22 2009 - 05:16:11 CDT)
Re: [AMBER] help regarding step size Vikas Sharma (Wed Apr 22 2009 - 05:50:27 CDT)
RE: [AMBER] bintraj and amber 10 Ross Walker (Wed Apr 22 2009 - 05:59:47 CDT)
Re: [AMBER] help regarding step size Carlos Simmerling (Wed Apr 22 2009 - 06:03:28 CDT)
Re: [AMBER] Disulfide bond Wei Zhang (Wed Apr 22 2009 - 10:00:02 CDT)
Re: [AMBER] Creating conditions for biased MD Bill Ross (Wed Apr 22 2009 - 11:19:20 CDT)
Re: [AMBER] Creating conditions for biased MD Francesco Pietra (Wed Apr 22 2009 - 13:01:39 CDT)
[AMBER] uncharged c and n terminal amino acids Christopher Materese (Wed Apr 22 2009 - 13:05:38 CDT)
Re: [AMBER] uncharged c and n terminal amino acids David A. Case (Wed Apr 22 2009 - 13:16:19 CDT)
Re: [AMBER] Partial interactions Ignacio J. General (Wed Apr 22 2009 - 14:02:00 CDT)
[AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Wed Apr 22 2009 - 16:55:58 CDT)
RE: [AMBER] Problem with RNA hairpin unwinding in explicit water Seetin, Matthew (Wed Apr 22 2009 - 17:22:29 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Carlos Simmerling (Wed Apr 22 2009 - 17:25:47 CDT)
[AMBER] Amber Sulfate Ion Parameters Gary Clark (Wed Apr 22 2009 - 17:31:00 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Wed Apr 22 2009 - 17:34:35 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Carlos Simmerling (Wed Apr 22 2009 - 17:53:33 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Thomas Cheatham III (Wed Apr 22 2009 - 17:56:25 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Wed Apr 22 2009 - 18:10:55 CDT)
RE: [AMBER] Problem with RNA hairpin unwinding in explicit water matthew_seetin_at_urmc.rochester.edu (Wed Apr 22 2009 - 18:59:02 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Wed Apr 22 2009 - 18:59:14 CDT)
Re: [AMBER] bintraj and amber 10 Naser Alijabbari (Wed Apr 22 2009 - 20:05:21 CDT)
Re: [AMBER] Partial interactions steinbrt_at_rci.rutgers.edu (Wed Apr 22 2009 - 21:55:52 CDT)
Re: [AMBER] help regarding step size Vikas Sharma (Wed Apr 22 2009 - 23:40:33 CDT)
Re: [AMBER] Amber Sulfate Ion Parameters FyD (Thu Apr 23 2009 - 00:18:28 CDT)
Re: [AMBER] Amber Sulfate Ion Parameters FyD (Thu Apr 23 2009 - 01:07:40 CDT)
[AMBER] error in output file Vikas Sharma (Thu Apr 23 2009 - 06:39:42 CDT)
Re: [AMBER] error in output file Carlos Simmerling (Thu Apr 23 2009 - 06:42:02 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Karl Kirschner (Thu Apr 23 2009 - 06:43:31 CDT)
Re: [AMBER] error in output file Vikas Sharma (Thu Apr 23 2009 - 06:58:24 CDT)
[AMBER] nmod no run proprely in mmbsa mohamed mohamed (Thu Apr 23 2009 - 07:20:36 CDT)
Re: [AMBER] error in output file Hemant Kumar (Thu Apr 23 2009 - 07:20:25 CDT)
Re: [AMBER] nmod no run proprely in mmbsa David A. Case (Thu Apr 23 2009 - 07:47:44 CDT)
[AMBER] Regarding syntax for freezing different atoms Jorgen Simonsen (Thu Apr 23 2009 - 07:50:43 CDT)
[AMBER] Amber Installation problem ÁÖÅÂ¼º (Thu Apr 23 2009 - 08:10:42 CDT)
RE: [AMBER] Amber Installation problem Ross Walker (Thu Apr 23 2009 - 08:16:18 CDT)
RE: [AMBER] Regarding syntax for freezing different atoms Ross Walker (Thu Apr 23 2009 - 08:24:55 CDT)
RE: [AMBER] error in output file Ross Walker (Thu Apr 23 2009 - 08:28:18 CDT)
RE: [AMBER] bintraj and amber 10 Ross Walker (Thu Apr 23 2009 - 08:31:08 CDT)
Re: [AMBER] error in output file Vikas Sharma (Thu Apr 23 2009 - 08:33:49 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Marek Malý (Thu Apr 23 2009 - 08:41:03 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Karl Kirschner (Thu Apr 23 2009 - 08:54:14 CDT)
Re: [AMBER] error in output file Vikas Sharma (Thu Apr 23 2009 - 08:55:20 CDT)
Re: [AMBER] Possibility to use ff99 + GAFF + GLYCAM_06 in one time for complex system ? - Last detail Marek Malý (Thu Apr 23 2009 - 09:30:07 CDT)
[AMBER] NAB bug with parmbsc0 David A. Case (Thu Apr 23 2009 - 11:25:27 CDT)
Re: [AMBER] bintraj and amber 10 Chris Moth (Thu Apr 23 2009 - 12:46:44 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Bill Ross (Thu Apr 23 2009 - 12:53:40 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Thu Apr 23 2009 - 12:55:58 CDT)
[AMBER] Unit name with loadMol2 command Nicholas Musolino (Thu Apr 23 2009 - 14:30:30 CDT)
Re: [AMBER] Amber Sulfate Ion Parameters Gary Clark (Thu Apr 23 2009 - 14:55:24 CDT)
[AMBER] CY3 dye parameters jcmoore_at_student.umass.edu (Thu Apr 23 2009 - 16:42:59 CDT)
Re: [AMBER] Unit name with loadMol2 command David A. Case (Thu Apr 23 2009 - 17:54:02 CDT)
Re: [AMBER] bintraj and amber 10 Naser Alijabbari (Thu Apr 23 2009 - 19:37:06 CDT)
[AMBER] Amber Installation problem ÁÖÅÂ¼º (Thu Apr 23 2009 - 20:35:46 CDT)
[AMBER] Equilibrium bond lengths and angle values Dmitri Nilov (Fri Apr 24 2009 - 08:19:56 CDT)
[AMBER] Simulated annealing waleed zalloum (Fri Apr 24 2009 - 09:31:36 CDT)
Re: [AMBER] Partial interactions Ignacio J. General (Fri Apr 24 2009 - 09:49:07 CDT)
Re: [AMBER] Simulated annealing Carlos Simmerling (Fri Apr 24 2009 - 09:49:40 CDT)
Re: [AMBER] Simulated annealing waleed zalloum (Fri Apr 24 2009 - 10:04:47 CDT)
Re: [AMBER] Simulated annealing Carlos Simmerling (Fri Apr 24 2009 - 10:44:02 CDT)
Re: [AMBER] Partial interactions steinbrt_at_rci.rutgers.edu (Fri Apr 24 2009 - 11:20:21 CDT)
Re: [AMBER] Partial interactions Ignacio J. General (Fri Apr 24 2009 - 12:11:31 CDT)
Re: [AMBER] Problem with RNA hairpin unwinding in explicit water Sasha Buzko (Fri Apr 24 2009 - 12:20:13 CDT)
Re: [AMBER] Partial interactions steinbrt_at_rci.rutgers.edu (Fri Apr 24 2009 - 12:48:58 CDT)
[AMBER] question Tatyana Fedotova (Fri Apr 24 2009 - 14:55:40 CDT)
Re: [AMBER] Equilibrium bond lengths and angle values FyD (Fri Apr 24 2009 - 16:05:42 CDT)
Re: [AMBER] CY3 dye parameters FyD (Sat Apr 25 2009 - 01:04:22 CDT)
Re: [AMBER] bintraj and amber 10 Naser Alijabbari (Sat Apr 25 2009 - 13:47:34 CDT)
Re: [AMBER] CY3 dye parameters Brent Krueger (Sat Apr 25 2009 - 14:33:40 CDT)
[AMBER] restraint constant Dong Xu (Sat Apr 25 2009 - 17:15:22 CDT)
[AMBER] Papers on Amber package usage Andrew Voronkov (Sun Apr 26 2009 - 00:07:42 CDT)
[AMBER] amber question Vikas Sharma (Sun Apr 26 2009 - 01:00:06 CDT)
Re: [AMBER] amber question Barbault Florent (Sun Apr 26 2009 - 03:48:31 CDT)
Re: [AMBER] amber question Vikas Sharma (Sun Apr 26 2009 - 04:51:38 CDT)
Re: [AMBER] amber question Vikas Sharma (Sun Apr 26 2009 - 04:56:26 CDT)
Re: [AMBER] Papers on Amber package usage David A. Case (Sun Apr 26 2009 - 07:48:31 CDT)
[AMBER] Water-molecules sikander azam (Sun Apr 26 2009 - 08:11:33 CDT)
[AMBER] Install ÁÖÅÂ¼º (Sun Apr 26 2009 - 08:45:45 CDT)
[AMBER] Using smd with fixed atom nandy_at_physics.iisc.ernet.in (Sun Apr 26 2009 - 09:57:45 CDT)
Re: [AMBER] Water-molecules case (Sun Apr 26 2009 - 17:35:36 CDT)
[AMBER] AmberTools compiling error Farly Walsh (Sun Apr 26 2009 - 19:40:38 CDT)
RE: [AMBER] AmberTools compiling error Ross Walker (Sun Apr 26 2009 - 20:55:06 CDT)
[AMBER] Error with calculation of the potential energy Per Jr. Greisen (Mon Apr 27 2009 - 06:03:44 CDT)
Re: [AMBER] Error with calculation of the potential energy Carlos Simmerling (Mon Apr 27 2009 - 06:08:47 CDT)
[AMBER] Mixing of forcefields in case of covaletly bonded systems Marek Malý (Mon Apr 27 2009 - 07:06:38 CDT)
[AMBER] MM-GBSA Free enegy decomposition Rajesh Raju (Mon Apr 27 2009 - 07:27:23 CDT)
[AMBER] Polarizable force field problem: non constant total Energy, EPOLZ is increasing Tommaso Cupido (Mon Apr 27 2009 - 09:10:12 CDT)
Re: [AMBER] Error with calculation of the potential energy Per Jr. Greisen (Mon Apr 27 2009 - 12:11:32 CDT)
Re: [AMBER] Polarizable force field problem: non constant total Energy, EPOLZ is increasing David A. Case (Mon Apr 27 2009 - 12:30:55 CDT)
Re: [AMBER] Error with calculation of the potential energy Robert Duke (Mon Apr 27 2009 - 13:25:14 CDT)
Re: [AMBER] Error with calculation of the potential energy Robert Duke (Mon Apr 27 2009 - 13:46:43 CDT)
Re: [AMBER] Error with calculation of the potential energy Per Jr. Greisen (Mon Apr 27 2009 - 13:57:58 CDT)
Re: [AMBER] Polarizable force field problem: non constant total Energy, EPOLZ is increasing Piotr Cieplak (Mon Apr 27 2009 - 14:07:38 CDT)
Re: [AMBER] Error with calculation of the potential energy Robert Duke (Mon Apr 27 2009 - 14:26:06 CDT)
[AMBER] pmemd compilation error john smith (Mon Apr 27 2009 - 22:30:21 CDT)
Re: [AMBER] pmemd compilation error Robert Duke (Mon Apr 27 2009 - 23:09:15 CDT)
[AMBER] Best rms fit for correlation and covariance analysis Cihan Aydin (Tue Apr 28 2009 - 00:02:14 CDT)
[AMBER] dipole autocorrelation functions aneesh cna (Tue Apr 28 2009 - 01:23:05 CDT)
Re: [AMBER] Equilibrium bond lengths and angle values Dmitri Nilov (Tue Apr 28 2009 - 05:56:38 CDT)
Fwd: [AMBER] MM-GBSA Free enegy decomposition Rajesh Raju (Tue Apr 28 2009 - 06:28:17 CDT)
[AMBER] transport properties oguz gurbulak (Tue Apr 28 2009 - 09:11:05 CDT)
[AMBER] ERROR In Restraint file. Catein Catherine (Tue Apr 28 2009 - 10:12:34 CDT)
[AMBER] reg-TMD balaji nagarajan (Tue Apr 28 2009 - 10:23:34 CDT)
[AMBER] ERROR In Restraint file. Catein Catherine (Tue Apr 28 2009 - 10:27:18 CDT)
Re: [AMBER] ERROR In Restraint file. David A. Case (Tue Apr 28 2009 - 11:17:36 CDT)
Re: [AMBER] Best rms fit for correlation and covariance analysis Bill Ross (Tue Apr 28 2009 - 11:57:10 CDT)
[AMBER] Restraining counterions? Francesco Pietra (Tue Apr 28 2009 - 12:32:18 CDT)
Re: [AMBER] reg-TMD Carlos Simmerling (Tue Apr 28 2009 - 12:48:18 CDT)
Re: [AMBER] Restraining counterions? Bill Ross (Tue Apr 28 2009 - 13:59:52 CDT)
[AMBER] ANAL problems E.M. (Tue Apr 28 2009 - 15:12:04 CDT)
Re: [AMBER] ANAL problems Bill Ross (Tue Apr 28 2009 - 15:40:59 CDT)
[AMBER] Using AMBER force fields in NAMD Michael Zimmermann (Tue Apr 28 2009 - 16:25:56 CDT)
[AMBER] parallel problem of QM/MM calculation for AMBER 9 liu junjun (Tue Apr 28 2009 - 16:53:06 CDT)
[AMBER] The PDB file was not recognized by Amber, what can i do? Houyang Chen (Tue Apr 28 2009 - 17:00:05 CDT)
Re: [AMBER] The PDB file was not recognized by Amber, what can i do? Carlos Simmerling (Tue Apr 28 2009 - 17:03:57 CDT)
RE: [AMBER] Using AMBER force fields in NAMD Ross Walker (Tue Apr 28 2009 - 17:17:06 CDT)
RE: [AMBER] Using AMBER force fields in NAMD Piotr Cieplak (Tue Apr 28 2009 - 17:23:15 CDT)
RE: [AMBER] parallel problem of QM/MM calculation for AMBER 9 Ross Walker (Tue Apr 28 2009 - 17:24:12 CDT)
RE: [AMBER] Using AMBER force fields in NAMD Thomas Cheatham III (Tue Apr 28 2009 - 17:45:15 CDT)
Re: [AMBER] The PDB file was not recognized by Amber, what can i do? Barbault Florent (Tue Apr 28 2009 - 18:00:55 CDT)
Re: [AMBER] ANAL problems Edward M (Tue Apr 28 2009 - 18:01:34 CDT)
RE: [AMBER] ERROR In Restraint file. Catein Catherine (Tue Apr 28 2009 - 18:32:26 CDT)
Re: [AMBER] ERROR In Restraint file. David A. Case (Tue Apr 28 2009 - 19:05:23 CDT)
[AMBER] Nonterminal, was not found in name map Sunita Patel (Tue Apr 28 2009 - 19:50:08 CDT)
Re: [AMBER] parallel problem of QM/MM calculation for AMBER 9 liu junjun (Tue Apr 28 2009 - 21:18:31 CDT)
RE: [AMBER] Nonterminal, was not found in name map Ross Walker (Tue Apr 28 2009 - 21:49:50 CDT)
RE: [AMBER] The PDB file was not recognized by Amber, what can i do? Houyang Chen (Tue Apr 28 2009 - 22:42:39 CDT)
RE: [AMBER] The PDB file was not recognized by Amber, what can i do? Ross Walker (Tue Apr 28 2009 - 22:56:27 CDT)
RE: [AMBER] reg-TMD balaji nagarajan (Tue Apr 28 2009 - 23:16:17 CDT)
[AMBER] REd program! R. A. (Tue Apr 28 2009 - 23:37:38 CDT)
RE: [AMBER] Nonterminal, was not found in name map Bill Ross (Wed Apr 29 2009 - 00:05:12 CDT)
Re: [AMBER] The PDB file was not recognized by Amber, what can i do? Barbault Florent (Wed Apr 29 2009 - 01:56:09 CDT)
Re: [AMBER] The PDB file was not recognized by Amber, what can i do? Markus Kaukonen (Wed Apr 29 2009 - 02:16:30 CDT)
Re: [AMBER] reg-TMD Carlos Simmerling (Wed Apr 29 2009 - 05:28:35 CDT)
RE: [AMBER] reg-TMD balaji nagarajan (Wed Apr 29 2009 - 06:25:50 CDT)
Re: [AMBER] reg-TMD Carlos Simmerling (Wed Apr 29 2009 - 06:33:40 CDT)
RE: [AMBER] reg-TMD balaji nagarajan (Wed Apr 29 2009 - 06:54:59 CDT)
[AMBER] (no subject) waleed zalloum (Wed Apr 29 2009 - 07:15:12 CDT)
Re: [AMBER] REd program! FyD (Wed Apr 29 2009 - 08:53:12 CDT)
[AMBER] input error in TI calculation Hannes Wallnoefer (Wed Apr 29 2009 - 10:40:58 CDT)
[AMBER] test/amoeba: forrtl: error (78): process killed (SIGTERM) Tomasio, Susana (Wed Apr 29 2009 - 12:45:36 CDT)
Re: [AMBER] (no subject) David A. Case (Wed Apr 29 2009 - 12:56:28 CDT)
Re: [AMBER] test/amoeba: forrtl: error (78): process killed (SIGTERM) Wei Zhang (Wed Apr 29 2009 - 13:00:28 CDT)
Re: [AMBER] (no subject) waleed zalloum (Wed Apr 29 2009 - 13:06:44 CDT)
Re: [AMBER] input error in TI calculation David A. Case (Wed Apr 29 2009 - 13:48:04 CDT)
Re: [AMBER] AmberTools compiling error Farly Walsh (Wed Apr 29 2009 - 14:49:27 CDT)
RE: [AMBER] test/amoeba: forrtl: error (78): process killed (SIGTERM) Tomasio, Susana (Wed Apr 29 2009 - 15:15:02 CDT)
RE: [AMBER] reg-TMD Hu, Shaowen (JSC-SK)[Universities Space Research Association USRA]. (Wed Apr 29 2009 - 15:56:07 CDT)
[AMBER] chain restrain x TI Josmar R. da Rocha (Wed Apr 29 2009 - 17:04:52 CDT)
RE: [AMBER] The PDB file was not recognized by Amber, what can i do? Houyang Chen (Wed Apr 29 2009 - 17:17:51 CDT)
[AMBER] Amber FF and Glycam Dong Xu (Wed Apr 29 2009 - 20:42:55 CDT)
RE: [AMBER] reg-TMD balaji nagarajan (Wed Apr 29 2009 - 20:44:32 CDT)
[AMBER] MM-PBSA energy decomposition Dong Xu (Wed Apr 29 2009 - 21:03:34 CDT)
[AMBER] hbond-error in amber9 balaji nagarajan (Wed Apr 29 2009 - 21:09:17 CDT)
[AMBER] Influence about HIS-HIE-HIS-HIP Rilei Yu (Wed Apr 29 2009 - 22:25:48 CDT)
[AMBER] how to add charge on metal ions bharat lakhani (Thu Apr 30 2009 - 01:44:46 CDT)
Re: [AMBER] MM-PBSA energy decomposition Hannes Kopitz (Thu Apr 30 2009 - 05:37:35 CDT)
Re: [AMBER] hbond-error in amber9 Alessandro S. Nascimento (Thu Apr 30 2009 - 05:46:02 CDT)
Re: [AMBER] Influence about HIS-HIE-HIS-HIP David A. Case (Thu Apr 30 2009 - 09:27:02 CDT)
Re: [AMBER] Amber FF and Glycam Lachele Foley (Lists) (Thu Apr 30 2009 - 12:16:17 CDT)
[AMBER] Request an error Collins Nganou (Thu Apr 30 2009 - 12:41:48 CDT)
Re: [AMBER] chain restrain x TI David A. Case (Thu Apr 30 2009 - 13:01:13 CDT)
Re: [AMBER] Amber FF and Glycam Carlos Simmerling (Thu Apr 30 2009 - 13:36:21 CDT)
[AMBER] (no subject) Collins Nganou (Thu Apr 30 2009 - 14:34:36 CDT)
[AMBER] Make parallel test faillure Collins Nganou (Thu Apr 30 2009 - 14:36:55 CDT)
RE: [AMBER] Make parallel test faillure Ross Walker (Thu Apr 30 2009 - 14:48:06 CDT)
Re: [AMBER] (no subject) David A. Case (Thu Apr 30 2009 - 15:16:35 CDT)
RE: [Subject Filtered] [AMBER] hbond-error in amber9 8% Hopkins, Robert (Thu Apr 30 2009 - 19:02:34 CDT)
Re: [AMBER] Influence about HIS-HIE-HIS-HIP Rilei Yu (Thu Apr 30 2009 - 19:37:17 CDT)

Last message date: Mon Nov 23 2009 - 12:37:20 CST
Archived on: Mon Nov 23 2009 - 12:37:23 CST

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