AMBER Archive (2009)

Subject: [AMBER] Backbone restraint

From: Rilei Yu (yulaomao1983_at_yahoo.com.cn)
Date: Fri Apr 17 2009 - 21:30:38 CDT

Dear AMBER users,
 
I want to perform MD on protein-ligand complex to consider the flexibility of the side chains in the binding pocket. So I want to restraint the backbone of the receptor, while the side chains are not restrainted. Can anyone tell me some script that can carry out this function?
 
Best Regards,
Rilei Yu

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