AMBER Archive (2009)
Subject: Re: [AMBER] Testing parallel amber10: no libmkl_lapack.so
From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Wed Apr 08 2009 - 18:17:38 CDT
On Thu, Apr 9, 2009 at 12:24 AM, Atro Tossavainen
>> > echo $LD_LIBRARY_PATH
> I see at least two obvious typos and one small detail that is wrong
> but might not have an effect at all. I hope you see them too.
> I assume one of the directories above is where you would have the
> library involved. Maybe you will double check anyway.
>> icc -c -wd117,177,266,880,1011 -DBINTRAJ -DSTAND_ALONE nhash.c
>> /usr/include/limits.h(125): catastrophic error: could not open source
>> file "limits.h"
>> # include_next <limits.h> ^
> Googling for
> icc catastrophic limits.h
> takes me to
> which has a solution at the end.
Yes, I had also seen that and have made deb packages of the 10.1.022
version (i tried with version 11 but my fixing script did not work:
alien alone is unable with both 10 and 11. we will see if this story
has an emd.
> Atro Tossavainen (Mr.) / The Institute of Biotechnology at
> Systems Analyst, Techno-Amish & / the University of Helsinki, Finland,
> +358-9-19158939 UNIX Dinosaur / employs me, but my opinions are my own.
> < URL : http : / / www . helsinki . fi / %7E atossava / > NO FILE ATTACHMENTS
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