AMBER Archive (2009)
Subject: Re: [AMBER] Failure to compile amber9 serial ifort gcc
From: Francesco Pietra (chiendarret_at_gmail.com)
Date: Thu Apr 02 2009 - 11:00:46 CDT
A "/" is missing from CXX, can't say if it was missing when issuing
To shorten, I have copied to the new installation of amd64 lenny all
previous /usr/local/bin executables, which comprise openmpi-1.2.6, and
verified that previous installation of amber 9 pass all serial and
parallel tests. But probably it was not fully patched and, anyway, it
is curious and defeating that I am now unable to compile it from
scratch. I have now posted in answer to Professor Case observation
about yacc parser.
On Thu, Apr 2, 2009 at 5:45 PM, Ross Walker <ross_at_rosswalker.co.uk> wrote:
> Hi Francesco,
>> CC=/opt/intel/cce/10.1.015/bin/icc CXX=opt/intel/cce/10.1.015/bin/icpc
>> FC=/opt/intel/fce/10.1.015/bin/ifort --with-libnuma=/usr/lib
>> cheching if C++ compiler works .. NO
>> it is not clear to me to which compiler NO refers: gcc or intel?
> This is telling you that the command you selected for icpc does not compile c++ code. So this is referring to the Intel compiler. It is not clear why it doesn't work. There should be a log file somewhere with more details. However, AMBER only needs the fortran compiler to match with the MPI build so I would suggest just setting F77=ifort FC=ifort and then leaving everything else at the defaults. This way it will use gcc and g++ for the c and C++ builds respectively.
> Good luck,
> |\oss Walker
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
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