AMBER Archive (2005) - Feb 2005 By DateMost recent messages
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Starting: Tue Feb 01 2005 - 04:56:21 CST
Ending: Mon Feb 28 2005 - 16:42:21 CST
- AMBER: vacuum bubbles in system equilibration Marie-Pierre Durrieu (Tue Feb 01 2005 - 04:56:21 CST)
- Re: AMBER: Problem in ptraj anshul_at_imtech.res.in (Tue Feb 01 2005 - 16:26:48 CST)
- Re: AMBER: N Metyl amino acids Carlos Simmerling (Tue Feb 01 2005 - 06:47:30 CST)
- AMBER: Carnal in Amber8 Vlad Cojocaru (Tue Feb 01 2005 - 10:11:09 CST)
- Re: AMBER: Carnal in Amber8 David A. Case (Tue Feb 01 2005 - 11:27:25 CST)
- AMBER: Multiple dihedral restraints Joseph Fernandez (Tue Feb 01 2005 - 11:29:40 CST)
- AMBER: Redhat Enterprise Linux Beale, John (Tue Feb 01 2005 - 11:49:20 CST)
- RE: AMBER: Redhat Enterprise Linux S. Frank Yan (Tue Feb 01 2005 - 11:57:00 CST)
- Re: AMBER: Problem in ptraj Furse, Kristina Elisabet (Tue Feb 01 2005 - 13:30:53 CST)
- Re: AMBER: Carnal in Amber8 Bill Ross (Tue Feb 01 2005 - 13:47:15 CST)
- Re: AMBER: Carnal in Amber8 Bill Ross (Tue Feb 01 2005 - 13:57:19 CST)
- AMBER: doubts with a new aminoacid Gustavo Pierdominici Sottile (Tue Feb 01 2005 - 14:28:52 CST)
- AMBER: External Electric Field Brandon Tefft (Tue Feb 01 2005 - 15:30:22 CST)
- AMBER: sander segmentation fault Xin Wang (Tue Feb 01 2005 - 16:15:12 CST)
- Re: AMBER: Multiple dihedral restraints David A. Case (Tue Feb 01 2005 - 16:54:49 CST)
- RE: AMBER: gaussian output file Junmei Wang (Tue Feb 01 2005 - 17:03:22 CST)
- Re: AMBER: doubts with a new aminoacid David A. Case (Tue Feb 01 2005 - 17:35:36 CST)
- RE: AMBER: Redhat Enterprise Linux Andrew Box (Tue Feb 01 2005 - 17:37:55 CST)
- Re: AMBER: doubts with a new aminoacid Bill Ross (Tue Feb 01 2005 - 18:36:38 CST)
- AMBER: xleap: different distance results from "check" command in xleap Woojin Lee (Tue Feb 01 2005 - 23:54:14 CST)
- Re: AMBER: Problem in ptraj anshul_at_imtech.res.in (Wed Feb 02 2005 - 16:04:28 CST)
- AMBER: Compilation problem at dual processor linux ! Pradipta Bandyopadhyay (Wed Feb 02 2005 - 06:32:52 CST)
- AMBER: change of prmtop file Gustavo Pierdominici Sottile (Wed Feb 02 2005 - 09:43:34 CST)
- AMBER: xleap MOVE and .lib file Stern, Julie (Wed Feb 02 2005 - 11:01:55 CST)
- RE: AMBER: Compilation problem at dual processor linux ! Ross Walker (Wed Feb 02 2005 - 11:52:10 CST)
- RE: AMBER: Redhat Enterprise Linux Beale, John (Wed Feb 02 2005 - 12:01:53 CST)
- Re: AMBER: change of prmtop file Guanglei Cui (Wed Feb 02 2005 - 12:03:53 CST)
- Re: AMBER: External Electric Field David A. Case (Wed Feb 02 2005 - 12:08:59 CST)
- AMBER: Multiple dihedral restraints (follow up) Joseph Fernandez (Wed Feb 02 2005 - 12:11:01 CST)
- Re: AMBER: Problem in ptraj Furse, Kristina Elisabet (Wed Feb 02 2005 - 12:16:03 CST)
- Re: AMBER: change of prmtop file David A. Case (Wed Feb 02 2005 - 12:21:34 CST)
- AMBER: amber 8 system requirements dkohen_at_carleton.edu (Wed Feb 02 2005 - 12:28:48 CST)
- Re: AMBER: Problem in ptraj Thomas E. Cheatham, III (Wed Feb 02 2005 - 12:34:01 CST)
- RE: AMBER: amber 8 system requirements Ross Walker (Wed Feb 02 2005 - 12:47:55 CST)
- Re: AMBER: Multiple dihedral restraints (follow up) David A. Case (Wed Feb 02 2005 - 13:04:47 CST)
- Re: AMBER: sander segmentation fault David A. Case (Wed Feb 02 2005 - 13:28:37 CST)
- Re: AMBER: sander segmentation fault Xin Wang (Wed Feb 02 2005 - 15:36:25 CST)
- Re: AMBER: sander segmentation fault David A. Case (Wed Feb 02 2005 - 16:39:06 CST)
- Re: AMBER: sander segmentation fault Furse, Kristina Elisabet (Wed Feb 02 2005 - 17:32:25 CST)
- AMBER: gaff frcmod file for TI calculation Eric Hu (Wed Feb 02 2005 - 17:50:00 CST)
- Re: AMBER: sander segmentation fault Thomas E. Cheatham, III (Wed Feb 02 2005 - 17:59:13 CST)
- Re: AMBER: gaff frcmod file for TI calculation David A. Case (Wed Feb 02 2005 - 18:44:13 CST)
- Re: AMBER: gaff frcmod file for TI calculation Eric Hu (Wed Feb 02 2005 - 19:47:32 CST)
- RE: AMBER: sander segmentation fault Ross Walker (Wed Feb 02 2005 - 20:05:41 CST)
- AMBER: question about tleap load pdb file xiaowen (Wed Feb 02 2005 - 21:19:19 CST)
- AMBER: protonate and input conversion error Stern, Julie (Thu Feb 03 2005 - 10:48:20 CST)
- AMBER: non-periodic condition gsciaini (Thu Feb 03 2005 - 10:40:46 CST)
- Re: AMBER: protonate and input conversion error David A. Case (Thu Feb 03 2005 - 12:09:31 CST)
- RE: AMBER: non-periodic condition Ross Walker (Thu Feb 03 2005 - 12:27:30 CST)
- Re: AMBER: Multiple dihedral restraints (follow up) M. L. Dodson (Thu Feb 03 2005 - 14:07:11 CST)
- RE: AMBER: non-periodic condition Germán Sciaini (Thu Feb 03 2005 - 14:42:34 CST)
- AMBER: DNA melting free energy calculation lei jia (Thu Feb 03 2005 - 18:39:57 CST)
- AMBER: unnatural ligand Eric Hu (Thu Feb 03 2005 - 21:37:41 CST)
- AMBER: clusters Germán Sciaini (Fri Feb 04 2005 - 06:36:48 CST)
- AMBER: tleap load pdb file xiaowen (Fri Feb 04 2005 - 09:44:17 CST)
- Re: AMBER: tleap load pdb file David A. Case (Fri Feb 04 2005 - 10:35:49 CST)
- AMBER: dppsv returns error code: 29 Xiaowei (David) Li (Fri Feb 04 2005 - 11:58:56 CST)
- AMBER: tleap load pdb file xiaowen (Fri Feb 04 2005 - 15:18:09 CST)
- Re: AMBER: dppsv returns error code: 29 David A. Case (Fri Feb 04 2005 - 16:48:38 CST)
- Re: AMBER: tleap load pdb file David A. Case (Fri Feb 04 2005 - 16:45:50 CST)
- Re: AMBER: unnatural ligand David A. Case (Fri Feb 04 2005 - 16:54:06 CST)
- AMBER: Antechamber/formatting question Kara Di Giorgio (Fri Feb 04 2005 - 17:05:18 CST)
- AMBER: huge bond distances in new residue Stern, Julie (Fri Feb 04 2005 - 17:48:14 CST)
- AMBER: trajectory of minimization Stern, Julie (Fri Feb 04 2005 - 17:49:17 CST)
- AMBER: Is droplet boundary condition option possible ? Soo (Sat Feb 05 2005 - 00:18:36 CST)
- Re: AMBER: tleap load pdb file xiaowen (Sat Feb 05 2005 - 11:20:12 CST)
- Re: AMBER: huge bond distances in new residue David A. Case (Sat Feb 05 2005 - 12:57:37 CST)
- Re: AMBER: Is droplet boundary condition option possible ? David A. Case (Sat Feb 05 2005 - 12:53:53 CST)
- Re: AMBER: trajectory of minimization David A. Case (Sat Feb 05 2005 - 12:54:39 CST)
- Re: AMBER: Antechamber/formatting question David A. Case (Sat Feb 05 2005 - 13:17:24 CST)
- AMBER: loading pdb in leap to create parmeter files mrbroad_at_ilstu.edu (Sat Feb 05 2005 - 15:24:04 CST)
- Re: AMBER: loading pdb in leap to create parmeter files David A. Case (Sat Feb 05 2005 - 16:29:13 CST)
- AMBER: Tutorial Request Kara Di Giorgio (Sun Feb 06 2005 - 11:01:15 CST)
- Re: AMBER: Tutorial Request David A. Case (Sun Feb 06 2005 - 11:40:28 CST)
- RE: AMBER: trajectory of minimization Ross Walker (Sun Feb 06 2005 - 12:36:29 CST)
- RE: AMBER: tleap load pdb file Ross Walker (Sun Feb 06 2005 - 12:50:29 CST)
- AMBER: inconsistent ordering in an improper dihedral of TRP Sanghyun Park (Sun Feb 06 2005 - 22:38:03 CST)
- AMBER: correlation along PCA modes Vlad Cojocaru (Mon Feb 07 2005 - 05:35:44 CST)
- Re: AMBER: unnatural ligand Eric Hu (Mon Feb 07 2005 - 12:28:14 CST)
- AMBER: Creating an input file for GRASP using AMBER 8 Ilyas Yildirim (Mon Feb 07 2005 - 13:07:29 CST)
- Re: AMBER: Creating an input file for GRASP using AMBER 8 Bill Ross (Mon Feb 07 2005 - 13:40:33 CST)
- Re: AMBER: Creating an input file for GRASP using AMBER 8 FyD (Mon Feb 07 2005 - 13:52:42 CST)
- AMBER: problem in writing Gustavo Pierdominici Sottile (Mon Feb 07 2005 - 13:59:49 CST)
- RE: AMBER: tleap load pdb file xiaowen (Mon Feb 07 2005 - 14:58:39 CST)
- Re: AMBER: Creating an input file for GRASP using AMBER 8 Ilyas Yildirim (Mon Feb 07 2005 - 16:24:24 CST)
- Re: AMBER: Creating an input file for GRASP using AMBER 8 FyD (Mon Feb 07 2005 - 16:45:05 CST)
- Re: AMBER: problem in writing David A. Case (Mon Feb 07 2005 - 17:22:05 CST)
- RE: AMBER: tleap load pdb file xiaowen (Mon Feb 07 2005 - 21:52:36 CST)
- AMBER: How to calculate RESTRAINT value Mayumi Haga (Mon Feb 07 2005 - 22:09:25 CST)
- AMBER: dynamics error S.Sundar Raman (Tue Feb 08 2005 - 05:10:19 CST)
- AMBER: Dynamics error S.Sundar Raman (Tue Feb 08 2005 - 05:25:07 CST)
- Re: AMBER: Dynamics error Carlos Simmerling (Tue Feb 08 2005 - 06:59:04 CST)
- Re: AMBER: How to calculate RESTRAINT value Carlos Simmerling (Tue Feb 08 2005 - 07:01:46 CST)
- Re: AMBER: Dynamics error S.Sundar Raman (Tue Feb 08 2005 - 08:09:04 CST)
- AMBER: MMGBSA and dielectric constant with AMBER8 - dielc and intdiel Fabien Cailliez (Tue Feb 08 2005 - 11:16:51 CST)
- AMBER: problem in minimization Gustavo Pierdominici Sottile (Tue Feb 08 2005 - 12:31:17 CST)
- Re: AMBER: MMGBSA and dielectric constant with AMBER8 - dielc and intdiel David A. Case (Tue Feb 08 2005 - 13:28:23 CST)
- AMBER: Minimization Beale, John (Tue Feb 08 2005 - 13:30:52 CST)
- AMBER: Linux Enterprise Beale, John (Tue Feb 08 2005 - 13:39:54 CST)
- RE: AMBER: Linux Enterprise S. Frank Yan (Tue Feb 08 2005 - 13:45:40 CST)
- Re: AMBER: tleap load pdb file David A. Case (Tue Feb 08 2005 - 13:50:08 CST)
- Re: AMBER: problem in minimization David A. Case (Tue Feb 08 2005 - 13:51:42 CST)
- AMBER: Amber8 installation test possible failures Joe Nolan (Tue Feb 08 2005 - 13:55:39 CST)
- Re: AMBER: problem in minimization Natasja Brooijmans (Tue Feb 08 2005 - 13:56:22 CST)
- Re: AMBER: Linux Enterprise David A. Case (Tue Feb 08 2005 - 13:59:15 CST)
- RE: AMBER: Linux Enterprise Ross Walker (Tue Feb 08 2005 - 13:59:43 CST)
- Re: AMBER: Amber8 installation test possible failures David A. Case (Tue Feb 08 2005 - 14:02:54 CST)
- Re: AMBER: problem in minimization Bill Ross (Tue Feb 08 2005 - 14:16:18 CST)
- RE: AMBER: Amber8 installation test possible failures Ross Walker (Tue Feb 08 2005 - 14:17:40 CST)
- Re: AMBER: problem in minimization Carlos Simmerling (Tue Feb 08 2005 - 15:47:30 CST)
- Re: AMBER: problem in minimization Bill Ross (Tue Feb 08 2005 - 16:16:47 CST)
- Re: AMBER: problem in minimization David A. Case (Tue Feb 08 2005 - 16:23:51 CST)
- AMBER: leap bond angle building Stern, Julie (Tue Feb 08 2005 - 17:44:39 CST)
- Re: AMBER: leap bond angle building Bill Ross (Tue Feb 08 2005 - 18:00:12 CST)
- AMBER: minimize a ptraj average pdb structure Eric Hu (Tue Feb 08 2005 - 19:48:26 CST)
- RE: AMBER: minimize a ptraj average pdb structure Vineet Pande (Wed Feb 09 2005 - 04:05:14 CST)
- AMBER: energy plot in minimization Gustavo Pierdominici Sottile (Wed Feb 09 2005 - 11:36:25 CST)
- AMBER: stereo Filip Lankas (Wed Feb 09 2005 - 11:53:45 CST)
- RE: AMBER: energy plot in minimization Ross Walker (Wed Feb 09 2005 - 12:10:13 CST)
- AMBER: question about mm_gbsa output file michael chen (Wed Feb 09 2005 - 12:10:06 CST)
- Re: AMBER: tleap load pdb file xiaowen (Wed Feb 09 2005 - 12:51:44 CST)
- RE: AMBER: stereo Vineet Pande (Wed Feb 09 2005 - 12:51:06 CST)
- AMBER: Convert to Pdb Beale, John (Wed Feb 09 2005 - 13:03:27 CST)
- Re: AMBER: Convert to Pdb Peter Gannett (Wed Feb 09 2005 - 13:07:07 CST)
- RE: AMBER: tleap load pdb file Ross Walker (Wed Feb 09 2005 - 13:18:31 CST)
- RE: AMBER: Convert to Pdb Ross Walker (Wed Feb 09 2005 - 13:19:15 CST)
- Re: AMBER: Convert to Pdb M. L. Dodson (Wed Feb 09 2005 - 13:28:22 CST)
- AMBER: minimization.out Gustavo Pierdominici Sottile (Wed Feb 09 2005 - 13:32:01 CST)
- RE: AMBER: minimize a ptraj average pdb structure Bill Ross (Wed Feb 09 2005 - 13:39:27 CST)
- AMBER: DIVCON optimization Kara Di Giorgio (Wed Feb 09 2005 - 13:46:03 CST)
- Re: AMBER: minimization.out David A. Case (Wed Feb 09 2005 - 13:53:41 CST)
- Re: AMBER: stereo Chris Moth (Wed Feb 09 2005 - 14:02:13 CST)
- Re: AMBER: DIVCON optimization David A. Case (Wed Feb 09 2005 - 14:22:59 CST)
- AMBER: Can REM be used as multiple normal sander jobs on parallel machine qlu_at_notes.cc.sunysb.edu (Wed Feb 09 2005 - 17:15:59 CST)
- Re: AMBER: DIVCON optimization Kara Wald (Wed Feb 09 2005 - 17:30:07 CST)
- Re: AMBER: Can REM be used as multiple normal sander jobs on parallel machine Carlos Simmerling (Wed Feb 09 2005 - 18:03:55 CST)
- AMBER: desc NEWRES and blank unit type Stern, Julie (Wed Feb 09 2005 - 20:07:00 CST)
- Re: AMBER: DIVCON optimization David A. Case (Wed Feb 09 2005 - 20:22:07 CST)
- AMBER: Another question about surface area calculation michael chen (Thu Feb 10 2005 - 00:26:00 CST)
- AMBER: question about surface area to GBsurf calculation michael chen (Thu Feb 10 2005 - 00:20:58 CST)
- Re: AMBER: question about surface area to GBsurf calculation David A. Case (Thu Feb 10 2005 - 09:55:33 CST)
- AMBER: Poisson Boltzmann dynamics error Rachel Burdge (Thu Feb 10 2005 - 10:04:55 CST)
- Re: AMBER: Poisson Boltzmann dynamics error David A. Case (Thu Feb 10 2005 - 10:57:51 CST)
- RE: AMBER: Poisson Boltzmann dynamics error Ross Walker (Thu Feb 10 2005 - 11:03:46 CST)
- Re: AMBER: Poisson Boltzmann dynamics error Ray Luo (Tue Feb 08 2005 - 06:13:58 CST)
- Re: AMBER: Poisson Boltzmann dynamics error Rachel Burdge (Thu Feb 10 2005 - 12:51:05 CST)
- AMBER: Protonate state of ARG and LYS. Liu, Jingyuan (Thu Feb 10 2005 - 15:56:39 CST)
- AMBER: How to converts a binary mdcrd file thanyarat Udom (Fri Feb 11 2005 - 01:02:21 CST)
- AMBER: How to converts a binary mdcrd file thanyarat Udom (Fri Feb 11 2005 - 02:00:10 CST)
- AMBER: Cu++ and RED Cenk Andac (Fri Feb 11 2005 - 03:46:13 CST)
- AMBER: too much vacuum in the box created by Leap Marie-Pierre Durrieu (Fri Feb 11 2005 - 06:53:35 CST)
- Re: AMBER: too much vacuum in the box created by Leap Carlos Simmerling (Fri Feb 11 2005 - 07:21:23 CST)
- AMBER: ptraj error and min problems Gustavo Pierdominici Sottile (Fri Feb 11 2005 - 08:54:23 CST)
- AMBER: archive Gustavo Pierdominici Sottile (Fri Feb 11 2005 - 08:58:33 CST)
- Re: AMBER: too much vacuum in the box created by Leap David A. Case (Fri Feb 11 2005 - 10:21:29 CST)
- Re: AMBER: ptraj error and min problems David A. Case (Fri Feb 11 2005 - 10:29:42 CST)
- Re: AMBER: Cu++ and RED FyD (Fri Feb 11 2005 - 11:23:53 CST)
- Re: AMBER: desc NEWRES and blank unit type David A. Case (Fri Feb 11 2005 - 16:24:25 CST)
- Re: AMBER: inconsistent ordering in an improper dihedral of TRP David A. Case (Fri Feb 11 2005 - 16:19:03 CST)
- Re: AMBER: inconsistent ordering in an improper dihedral of TRP Carlos Simmerling (Fri Feb 11 2005 - 17:41:26 CST)
- AMBER: nucgen problem Ilyas Yildirim (Fri Feb 11 2005 - 18:56:41 CST)
- Re: AMBER: nucgen problem David A. Case (Fri Feb 11 2005 - 19:37:32 CST)
- Re: AMBER: inconsistent ordering in an improper dihedral of TRP Bill Ross (Fri Feb 11 2005 - 19:56:10 CST)
- AMBER: reverse TI charge perturbation Eric Hu (Fri Feb 11 2005 - 19:59:10 CST)
- Re: AMBER: reverse TI charge perturbation David A. Case (Sat Feb 12 2005 - 18:14:58 CST)
- AMBER: S.Sundar Raman (Mon Feb 14 2005 - 03:03:27 CST)
- AMBER:how to analyse trajectory files S.Sundar Raman (Mon Feb 14 2005 - 03:17:39 CST)
- RE: AMBER:how to analyse trajectory files Vineet Pande (Mon Feb 14 2005 - 05:07:21 CST)
- AMBER: vlimit Gustavo Pierdominici Sottile (Mon Feb 14 2005 - 06:23:31 CST)
- AMBER: AMBER 8 : Water cap problem Guillaume Bollot (Mon Feb 14 2005 - 07:14:20 CST)
- AMBER: constrains Gustavo Pierdominici Sottile (Mon Feb 14 2005 - 08:53:18 CST)
- RE: AMBER: constrains Vineet Pande (Mon Feb 14 2005 - 09:48:39 CST)
- RE: AMBER: Ross Walker (Mon Feb 14 2005 - 11:03:52 CST)
- RE: AMBER: AMBER 8 : Water cap problem Ross Walker (Mon Feb 14 2005 - 11:07:21 CST)
- RE: AMBER: constrains Ross Walker (Mon Feb 14 2005 - 11:10:42 CST)
- RE: AMBER: vlimit Ross Walker (Mon Feb 14 2005 - 11:14:56 CST)
- AMBER: Restart Problem opitz_at_che.udel.edu (Mon Feb 14 2005 - 13:12:54 CST)
- RE: AMBER: Restart Problem Ross Walker (Mon Feb 14 2005 - 14:01:16 CST)
- AMBER: Mainchain example needed Kara Wald (Mon Feb 14 2005 - 15:43:06 CST)
- AMBER: running shell scripts in tleap? Cenk Andac (Mon Feb 14 2005 - 16:23:44 CST)
- RE: AMBER: running shell scripts in tleap? Ross Walker (Mon Feb 14 2005 - 17:31:03 CST)
- Re: AMBER: running shell scripts in tleap? Lihua Wang (Mon Feb 14 2005 - 17:26:31 CST)
- Re: AMBER: running shell scripts in tleap? John Bushnell (Mon Feb 14 2005 - 17:32:32 CST)
- Re: AMBER: reverse TI charge perturbation Eric Hu (Mon Feb 14 2005 - 18:42:14 CST)
- AMBER: Dummy Atom Types on both states Ilyas Yildirim (Mon Feb 14 2005 - 20:29:03 CST)
- Re: AMBER:how to analyse trajectory files S.Sundar Raman (Mon Feb 14 2005 - 22:58:19 CST)
- RE: AMBER: running shell scripts in tleap? Cenk Andac (Mon Feb 14 2005 - 23:24:44 CST)
- Re: AMBER: Cu++ and RED Cenk Andac (Mon Feb 14 2005 - 23:30:47 CST)
- Re: AMBER: Dummy Atom Types on both states Thomas Steinbrecher (Tue Feb 15 2005 - 03:04:06 CST)
- AMBER: Topology Format Amber 8 Stuart Murdock (Tue Feb 15 2005 - 06:00:56 CST)
- Re: AMBER: Topology Format Amber 8 Carlos Simmerling (Tue Feb 15 2005 - 06:42:29 CST)
- Re: AMBER: Topology Format Amber 8 Ian Withers (Tue Feb 15 2005 - 07:33:15 CST)
- Re: AMBER: Dummy Atom Types on both states yipinl_at_umich.edu (Tue Feb 15 2005 - 09:31:56 CST)
- Re: AMBER: Dummy Atom Types on both states Julien Michel (Tue Feb 15 2005 - 10:10:34 CST)
- Re: AMBER: Dummy Atom Types on both states david.evans_at_ulsop.ac.uk (Tue Feb 15 2005 - 11:29:39 CST)
- Re: AMBER: Dummy Atom Types on both states david.evans_at_ulsop.ac.uk (Tue Feb 15 2005 - 12:13:57 CST)
- Re: AMBER: Cu++ and RED FyD (Tue Feb 15 2005 - 12:19:16 CST)
- AMBER: problems with running sander in parallel on linux Piotr Cieplak (Tue Feb 15 2005 - 12:28:02 CST)
- RE: AMBER: problems with running sander in parallel on linux Ross Walker (Tue Feb 15 2005 - 12:50:53 CST)
- RE: AMBER: problems with running sander in parallel on linux Piotr Cieplak (Tue Feb 15 2005 - 13:01:15 CST)
- AMBER: blows up Gustavo Pierdominici Sottile (Tue Feb 15 2005 - 13:11:43 CST)
- AMBER: check in leap Gustavo Pierdominici Sottile (Tue Feb 15 2005 - 13:34:21 CST)
- Re: AMBER: problems with running sander in parallel on linux Scott Brozell (Tue Feb 15 2005 - 13:42:45 CST)
- Re: AMBER: problems with running sander in parallel on linux Robert Duke (Tue Feb 15 2005 - 13:43:37 CST)
- Re: AMBER: problems with running sander in parallel on linux David E. Konerding DSD staff (Tue Feb 15 2005 - 14:48:50 CST)
- Re: AMBER: problems with running sander in parallel on linux Piotr Cieplak (Tue Feb 15 2005 - 14:55:59 CST)
- Re: AMBER: problems with running sander in parallel on linux Scott Brozell (Tue Feb 15 2005 - 15:01:21 CST)
- AMBER: Cyclic peptide arubin_at_unmc.edu (Tue Feb 15 2005 - 15:12:28 CST)
- Re: AMBER: check in leap David A. Case (Tue Feb 15 2005 - 15:17:07 CST)
- Re: AMBER: problems with running sander in parallel on linux Robert Duke (Tue Feb 15 2005 - 15:25:52 CST)
- Re: AMBER: problems with running sander in parallel on linux Piotr Cieplak (Tue Feb 15 2005 - 15:58:09 CST)
- Re: AMBER: problems with running sander in parallel on linux Scott Brozell (Tue Feb 15 2005 - 16:02:56 CST)
- Re: AMBER: Dummy Atom Types on both states David A. Case (Tue Feb 15 2005 - 16:26:21 CST)
- AMBER: soft-cores and Amber David A. Case (Tue Feb 15 2005 - 16:55:30 CST)
- Re: AMBER: soft-cores and Amber Carlos Simmerling (Tue Feb 15 2005 - 17:11:14 CST)
- AMBER: PDB conversion to gzmat using antechamber Scott Pendley (Tue Feb 15 2005 - 17:32:21 CST)
- AMBER: EWALD and belly not strictly correct Stern, Julie (Tue Feb 15 2005 - 23:41:49 CST)
- AMBER: Why I couldnt used carnal for analyzed RMSD ? thanyarat Udom (Wed Feb 16 2005 - 03:28:17 CST)
- Re: AMBER: Cyclic peptide Stefano Federico Massimiliano Pieraccini (Stefano.Pieraccini) (Wed Feb 16 2005 - 03:48:19 CST)
- AMBER: Gustavo Pierdominici Sottile (Wed Feb 16 2005 - 06:22:59 CST)
- Re: AMBER: Carlos Simmerling (Wed Feb 16 2005 - 06:55:57 CST)
- Re: AMBER: Cyclic peptide Carlos Simmerling (Wed Feb 16 2005 - 07:00:29 CST)
- AMBER: rms Gustavo Pierdominici Sottile (Wed Feb 16 2005 - 07:14:50 CST)
- Re: AMBER: rms Carlos Simmerling (Wed Feb 16 2005 - 07:59:43 CST)
- AMBER: Beale, John (Wed Feb 16 2005 - 07:42:26 CST)
- AMBER: Phi-Psi-Energy plot L Jin (Wed Feb 16 2005 - 09:45:18 CST)
- Re: AMBER: David A. Case (Wed Feb 16 2005 - 10:49:18 CST)
- Re: AMBER: EWALD and belly not strictly correct David A. Case (Wed Feb 16 2005 - 10:52:20 CST)
- Re: AMBER: EWALD and belly not strictly correct darden (Wed Feb 16 2005 - 11:08:31 CST)
- AMBER: generate charmm paramater file from amber parm file HL Eastwood (Wed Feb 16 2005 - 11:19:56 CST)
- Re: AMBER: generate charmm paramater file from amber parm file david.evans_at_ulsop.ac.uk (Wed Feb 16 2005 - 12:02:07 CST)
- Re: AMBER: generate charmm paramater file from amber parm file David E. Konerding DSD staff (Wed Feb 16 2005 - 12:13:23 CST)
- Re: AMBER: Why I couldnt used carnal for analyzed RMSD ? Bill Ross (Wed Feb 16 2005 - 12:19:30 CST)
- AMBER: Amber7 nmropt Markus W. Germann (Wed Feb 16 2005 - 15:09:08 CST)
- RE: AMBER: Amber7 nmropt Ross Walker (Wed Feb 16 2005 - 15:32:05 CST)
- Re: AMBER: Amber7 nmropt Markus W. Germann (Wed Feb 16 2005 - 15:40:46 CST)
- Re: AMBER: Amber7 nmropt David A. Case (Wed Feb 16 2005 - 15:53:19 CST)
- RE: AMBER: Amber7 nmropt Ross Walker (Wed Feb 16 2005 - 15:55:40 CST)
- Re: AMBER: Amber7 nmropt Robert Duke (Wed Feb 16 2005 - 17:05:37 CST)
- AMBER: installation of amber 8 on windows anshul_at_imtech.res.in (Thu Feb 17 2005 - 14:17:11 CST)
- AMBER: Re: pmemd problems Robert Duke (Thu Feb 17 2005 - 09:15:33 CST)
- AMBER: rotameric populations? Cenk Andac (Thu Feb 17 2005 - 09:15:05 CST)
- AMBER: moil-view Beale, John (Thu Feb 17 2005 - 09:56:30 CST)
- Re: AMBER: moil-view Carlos Simmerling (Thu Feb 17 2005 - 10:28:15 CST)
- Re: AMBER: installation of amber 8 on windows David Mathews (Thu Feb 17 2005 - 10:42:05 CST)
- AMBER: Antechamber help needed Kara Di Giorgio (Thu Feb 17 2005 - 11:24:34 CST)
- AMBER: Moil view trajectory clusters Austin B. Yongye (Thu Feb 17 2005 - 11:36:15 CST)
- AMBER: problem with ptraj and randomizeions Fabien Cailliez (Thu Feb 17 2005 - 11:56:24 CST)
- Re: AMBER: Moil view trajectory clusters Carlos Simmerling (Thu Feb 17 2005 - 12:19:50 CST)
- Re: AMBER: problem with ptraj and randomizeions Thomas E. Cheatham, III (Thu Feb 17 2005 - 12:57:23 CST)
- AMBER: PSC Summer Workshop: Modeling Proteins and Nucleic Acids with AMBER, VMD and the MMTSB Toolkit Troy Wymore (Thu Feb 17 2005 - 13:00:36 CST)
- AMBER: amber8 and moil-view Lihua Wang (Thu Feb 17 2005 - 13:26:32 CST)
- Re: AMBER: amber8 and moil-view Carlos Simmerling (Thu Feb 17 2005 - 13:42:13 CST)
- Re: AMBER: amber8 and moil-view Lihua Wang (Thu Feb 17 2005 - 13:52:08 CST)
- Re: AMBER: amber8 and moil-view Carlos Simmerling (Thu Feb 17 2005 - 14:06:42 CST)
- Re: AMBER: amber8 and moil-view Lihua Wang (Thu Feb 17 2005 - 14:14:04 CST)
- AMBER: Amber8 Solaris installation failure Joe Nolan (Thu Feb 17 2005 - 14:27:12 CST)
- Re: AMBER: Moil view trajectory clusters Austin B. Yongye (Thu Feb 17 2005 - 15:31:37 CST)
- AMBER: sander errors with atom restraints on ia64 Rachel Burdge (Thu Feb 17 2005 - 15:46:04 CST)
- Re: AMBER: sander errors with atom restraints on ia64 Viktor Hornak (Thu Feb 17 2005 - 16:46:26 CST)
- AMBER: leap saveamberparm chain types response Stern, Julie (Thu Feb 17 2005 - 17:16:50 CST)
- AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD) Greg Recine (Thu Feb 17 2005 - 18:23:01 CST)
- Re: AMBER: leap saveamberparm chain types response Bill Ross (Thu Feb 17 2005 - 19:15:20 CST)
- Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD) M. L. Dodson (Thu Feb 17 2005 - 20:21:29 CST)
- Re: AMBER: Amber8 Solaris installation failure David A. Case (Thu Feb 17 2005 - 20:31:00 CST)
- Re: AMBER: installation of amber 8 on windows anshul_at_imtech.res.in (Fri Feb 18 2005 - 08:33:40 CST)
- AMBER: GB solvation and "boxed" environment simulation Soo (Thu Feb 17 2005 - 23:32:38 CST)
- AMBER: molecule blowing apart during equilibration Stern, Julie (Fri Feb 18 2005 - 01:12:16 CST)
- Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD) David A. Case (Fri Feb 18 2005 - 01:41:23 CST)
- Re: AMBER: Compiling/Runing on BSD - emulation and/or gfortran (Linux and BSD) David A. Case (Fri Feb 18 2005 - 01:56:20 CST)
- Re: AMBER: problem with ptraj and randomizeions Fabien Cailliez (Fri Feb 18 2005 - 02:50:00 CST)
- Re: AMBER: problem with ptraj and randomizeions Marie-Pierre Durrieu (Fri Feb 18 2005 - 03:49:16 CST)
- Re: AMBER: problem with ptraj and randomizeions Marie-Pierre Durrieu (Fri Feb 18 2005 - 04:19:06 CST)
- Re: AMBER: problem with ptraj and randomizeions Filip Lankas (Fri Feb 18 2005 - 06:19:10 CST)
- AMBER: ptraj Gustavo Pierdominici Sottile (Fri Feb 18 2005 - 08:58:37 CST)
- Re: AMBER: sander errors with atom restraints on ia64 Rachel Burdge (Fri Feb 18 2005 - 10:04:17 CST)
- RE: AMBER: molecule blowing apart during equilibration Ross Walker (Fri Feb 18 2005 - 10:56:30 CST)
- Re: AMBER: Antechamber/formatting question Kara Di Giorgio (Fri Feb 18 2005 - 12:20:40 CST)
- AMBER: XMGR Beale, John (Fri Feb 18 2005 - 12:20:44 CST)
- Re: AMBER: molecule blowing apart during equilibration Carlos Simmerling (Fri Feb 18 2005 - 14:11:49 CST)
- Re: AMBER: amber8 and moil-view Carlos Simmerling (Fri Feb 18 2005 - 14:13:03 CST)
- Re: AMBER: XMGR Andreas Svrcek-Seiler (Fri Feb 18 2005 - 14:31:15 CST)
- AMBER: DNA Tutorial Dwayne Hoobler (Fri Feb 18 2005 - 17:07:34 CST)
- RE: AMBER: DNA Tutorial Ross Walker (Fri Feb 18 2005 - 19:15:31 CST)
- AMBER: Amber: sander error segmentation fault. S.Sundar Raman (Sat Feb 19 2005 - 00:03:50 CST)
- RE: AMBER: Amber: sander error segmentation fault. Ross Walker (Sat Feb 19 2005 - 00:34:22 CST)
- Re: AMBER: installation of amber 8 on windows David Mathews (Sat Feb 19 2005 - 10:01:54 CST)
- AMBER: ptraj for RDF calculations Javier Perez Miron (Sat Feb 19 2005 - 10:47:02 CST)
- AMBER: simulation with explicit water molecules Ye MEI (Sat Feb 19 2005 - 21:24:48 CST)
- AMBER: (no subject) yen li (Sun Feb 20 2005 - 12:16:32 CST)
- AMBER: AIX problem Mayumi Haga (Sun Feb 20 2005 - 23:17:29 CST)
- AMBER: ptraj for RDF calculations Javier Perez Miron (Mon Feb 21 2005 - 02:42:33 CST)
- AMBER: Amber 8 with lam compilation problem m m (Mon Feb 21 2005 - 02:55:49 CST)
- AMBER: problem with protein minimization yen li (Mon Feb 21 2005 - 03:12:02 CST)
- Re: AMBER: ptraj for RDF calculations Carlos Jaime (Mon Feb 21 2005 - 03:11:22 CST)
- RE: AMBER: Amber 8 with lam compilation problem Ross Walker (Mon Feb 21 2005 - 03:20:21 CST)
- AMBER: separate solvent-solvent and solvent-solute interaction Ye MEI (Mon Feb 21 2005 - 06:44:22 CST)
- Re: AMBER: Antechamber/formatting question YoungJin Cho (Mon Feb 21 2005 - 10:15:32 CST)
- Re: AMBER: separate solvent-solvent and solvent-solute interaction David A. Case (Mon Feb 21 2005 - 11:07:24 CST)
- AMBER: Formatting Questions Kara Di Giorgio (Mon Feb 21 2005 - 13:09:44 CST)
- RE: AMBER: DNA Tutorial Dwayne Hoobler (Mon Feb 21 2005 - 14:26:37 CST)
- AMBER: Free energy extimate for the same structure but different conformers claudio (Mon Feb 21 2005 - 14:56:10 CST)
- Re: AMBER: DNA Tutorial David A. Case (Mon Feb 21 2005 - 17:52:21 CST)
- Re: AMBER: Free energy extimate for the same structure but different conformers David A. Case (Mon Feb 21 2005 - 18:00:39 CST)
- Re: AMBER: AIX problem David A. Case (Mon Feb 21 2005 - 18:05:40 CST)
- Re: AMBER: problem with protein minimization David A. Case (Mon Feb 21 2005 - 18:11:37 CST)
- RE: AMBER: AIX problem Mayumi Haga (Mon Feb 21 2005 - 18:45:33 CST)
- Re: AMBER: Formatting Questions David A. Case (Mon Feb 21 2005 - 19:33:34 CST)
- Re: AMBER: Formatting Questions Kara Di Giorgio (Mon Feb 21 2005 - 20:03:37 CST)
- Re: Re: AMBER: separate solvent-solvent and solvent-solute interaction Ye MEI (Mon Feb 21 2005 - 21:21:48 CST)
- Re: AMBER: problem with protein minimization yen li (Tue Feb 22 2005 - 03:26:37 CST)
- AMBER: ptraj problem Mayumi Haga (Tue Feb 22 2005 - 03:38:43 CST)
- Re: AMBER: ptraj problem scopio (Tue Feb 22 2005 - 04:08:28 CST)
- AMBER: restraint only for Z cartegian coordinate? Jaroslav Hanus (Tue Feb 22 2005 - 09:40:58 CST)
- Re: AMBER: restraint only for Z cartegian coordinate? Carlos Simmerling (Tue Feb 22 2005 - 10:02:31 CST)
- AMBER: Restraint of atoms during minimization L Jin (Tue Feb 22 2005 - 10:17:05 CST)
- AMBER: dihedral driver? Beale, John (Tue Feb 22 2005 - 10:26:26 CST)
- Re: AMBER: Restraint of atoms during minimization Carlos Simmerling (Tue Feb 22 2005 - 10:34:06 CST)
- AMBER: vlimit exceeded and temperature blow up Stern, Julie (Tue Feb 22 2005 - 10:36:05 CST)
- Re: AMBER: vlimit exceeded and temperature blow up Carlos Simmerling (Tue Feb 22 2005 - 10:46:21 CST)
- RE: AMBER: problem with protein minimization Ross Walker (Tue Feb 22 2005 - 10:47:56 CST)
- AMBER: MPI for sander8 S. Frank Yan (Tue Feb 22 2005 - 11:04:56 CST)
- Re: AMBER: Restraint of atoms during minimization L Jin (Tue Feb 22 2005 - 11:12:13 CST)
- Re: AMBER: problem with protein minimization Robert Duke (Tue Feb 22 2005 - 11:10:51 CST)
- Re: AMBER: MPI for sander8 Viktor Hornak (Tue Feb 22 2005 - 11:13:46 CST)
- Re: AMBER: MPI for sander8 Thomas E. Cheatham, III (Tue Feb 22 2005 - 11:22:18 CST)
- Re: AMBER: Restraint of atoms during minimization David A. Case (Tue Feb 22 2005 - 11:19:17 CST)
- Re: AMBER: Restraint of atoms during minimization Carlos Simmerling (Tue Feb 22 2005 - 11:28:01 CST)
- Re: AMBER: Restraint of atoms during minimization Thomas E. Cheatham, III (Tue Feb 22 2005 - 11:36:42 CST)
- RE: AMBER: MPI for sander8 Ross Walker (Tue Feb 22 2005 - 11:54:37 CST)
- AMBER: ptraj8: trajectory windows Anselm Horn (Tue Feb 22 2005 - 11:16:13 CST)
- RE: AMBER: MPI for sander8 James W. Caldwell (Tue Feb 22 2005 - 13:52:56 CST)
- Re: AMBER: Amber8 Solaris installation failure Joe Nolan (Tue Feb 22 2005 - 14:12:02 CST)
- Re: AMBER: Amber8 Solaris installation failure Atro Tossavainen (Tue Feb 22 2005 - 14:19:31 CST)
- Re: AMBER: Formatting Questions Kara Di Giorgio (Tue Feb 22 2005 - 15:48:46 CST)
- AMBER: lastrst Stern, Julie (Tue Feb 22 2005 - 17:06:24 CST)
- Re: AMBER: Amber8 Solaris installation failure Joe Nolan (Tue Feb 22 2005 - 17:34:50 CST)
- RE: AMBER: Amber8 Solaris installation failure Ross Walker (Tue Feb 22 2005 - 17:55:17 CST)
- Re: AMBER: Formatting Questions Bill Ross (Tue Feb 22 2005 - 18:03:26 CST)
- RE: AMBER: Amber8 Solaris installation failure Bill Ross (Tue Feb 22 2005 - 18:08:37 CST)
- Re: AMBER: Amber8 Solaris installation failure David A. Case (Tue Feb 22 2005 - 18:52:13 CST)
- AMBER: minimizing structures before MM-PBSA? scopio (Tue Feb 22 2005 - 19:23:37 CST)
- AMBER: lastrst Stern, Julie (Tue Feb 22 2005 - 19:21:00 CST)
- AMBER: convert one functional group to another with TI Eric Hu (Tue Feb 22 2005 - 19:29:42 CST)
- Re: AMBER: minimizing structures before MM-PBSA? Carlos Simmerling (Tue Feb 22 2005 - 19:37:18 CST)
- Re: AMBER: lastrst Carlos Simmerling (Tue Feb 22 2005 - 19:39:37 CST)
- Re: AMBER: Amber8 Solaris installation failure M. L. Dodson (Tue Feb 22 2005 - 20:33:31 CST)
- Re: AMBER: lastrst Ilyas Yildirim (Tue Feb 22 2005 - 20:36:00 CST)
- AMBER: total energy of solvation Holly Freedman (Tue Feb 22 2005 - 22:05:36 CST)
- AMBER: size of solventbox mathew k varghese (Tue Feb 22 2005 - 22:07:00 CST)
- AMBER: parallel AMBER/pmemd installation problem on Opteron Jyh-Shyong Ho (Tue Feb 22 2005 - 23:08:22 CST)
- RE: AMBER: size of solventbox Ross Walker (Tue Feb 22 2005 - 23:22:03 CST)
- Re: AMBER: total energy of solvation David A. Case (Tue Feb 22 2005 - 23:40:47 CST)
- Re: AMBER: convert one functional group to another with TI David A. Case (Tue Feb 22 2005 - 23:44:41 CST)
- Re: AMBER: lastrst David A. Case (Tue Feb 22 2005 - 23:53:28 CST)
- Re: AMBER: convert one functional group to another with TI Eric Hu (Wed Feb 23 2005 - 00:36:03 CST)
- AMBER: RE:Amber 8 with lam compilation problem Maciej KA (Wed Feb 23 2005 - 01:08:16 CST)
- AMBER: mpirun sander8 problem S. Frank Yan (Wed Feb 23 2005 - 01:13:34 CST)
- RE: AMBER: RE:Amber 8 with lam compilation problem Ross Walker (Wed Feb 23 2005 - 01:20:54 CST)
- AMBER: RE:Amber 8 with lam compilation problem Maciej KA (Wed Feb 23 2005 - 02:07:37 CST)
- Re: AMBER: size of solventbox Germán Sciaini (Wed Feb 23 2005 - 04:50:39 CST)
- Re: AMBER: size of solventbox Fabien Cailliez (Wed Feb 23 2005 - 05:21:52 CST)
- Re: AMBER: mpirun sander8 problem Carlos Simmerling (Wed Feb 23 2005 - 07:05:01 CST)
- Re: AMBER: parallel AMBER/pmemd installation problem on Opteron Robert Duke (Wed Feb 23 2005 - 07:17:54 CST)
- Re: AMBER: parallel AMBER/pmemd installation problem on Opteron Lars Packschies (Wed Feb 23 2005 - 10:22:59 CST)
- RE: AMBER: mpirun sander8 problem S. Frank Yan (Wed Feb 23 2005 - 10:58:08 CST)
- Re: AMBER: parallel AMBER/pmemd installation problem on Opteron Robert Duke (Wed Feb 23 2005 - 11:27:13 CST)
- RE: AMBER: RE:Amber 8 with lam compilation problem Ross Walker (Wed Feb 23 2005 - 12:02:47 CST)
- Re: AMBER: RE:Amber 8 with lam compilation problem Amber admin (Wed Feb 23 2005 - 14:39:02 CST)
- Re: AMBER: size of solventbox Brent Krueger (Wed Feb 23 2005 - 14:54:35 CST)
- Re: AMBER: lastrst Stern, Julie (Wed Feb 23 2005 - 15:03:57 CST)
- AMBER: classes Gustavo Pierdominici Sottile (Wed Feb 23 2005 - 15:00:47 CST)
- Re: AMBER: lastrst Furse, Kristina Elisabet (Wed Feb 23 2005 - 15:36:08 CST)
- Re: AMBER: convert one functional group to another with TI David A. Case (Wed Feb 23 2005 - 16:46:55 CST)
- Re: AMBER: convert one functional group to another with TI David A. Case (Wed Feb 23 2005 - 17:01:42 CST)
- Re: AMBER: convert one functional group to another with TI Eric Hu (Wed Feb 23 2005 - 17:18:29 CST)
- AMBER: solvateOct method Cameron Mura (Wed Feb 23 2005 - 20:26:19 CST)
- AMBER: RE:Amber 8 with lam compilation problem Maciej (Thu Feb 24 2005 - 01:43:53 CST)
- FW: AMBER: mpirun sander8 problem S. Frank Yan (Thu Feb 24 2005 - 02:41:14 CST)
- Re: AMBER: Use of ibelly with nmode analysis marti (Thu Feb 24 2005 - 05:47:28 CST)
- AMBER: How to build dynamics input for guanine with tleap ? Maciej (Thu Feb 24 2005 - 07:44:37 CST)
- Re: AMBER: RE:Amber 8 with lam compilation problem Robert Duke (Thu Feb 24 2005 - 07:54:08 CST)
- RE: AMBER: classes Vineet Pande (Thu Feb 24 2005 - 08:29:19 CST)
- RE: AMBER: How to build dynamics input for guanine with tleap ? Vineet Pande (Thu Feb 24 2005 - 08:35:23 CST)
- AMBER: Joining residues/units Bogos Agianian (Thu Feb 24 2005 - 08:58:55 CST)
- Re: FW: AMBER: mpirun sander8 problem Guanglei Cui (Thu Feb 24 2005 - 09:46:05 CST)
- Re: AMBER: mpirun sander8 problem S. Frank Yan (Thu Feb 24 2005 - 10:30:23 CST)
- Re: AMBER: Use of ibelly with nmode analysis David A. Case (Thu Feb 24 2005 - 10:30:31 CST)
- AMBER: cross-correlation Xin Hu (Thu Feb 24 2005 - 10:40:54 CST)
- AMBER: ambpdb radii Harianto (Thu Feb 24 2005 - 13:24:39 CST)
- AMBER: units describing projection onto modes Vlad Cojocaru (Thu Feb 24 2005 - 12:40:18 CST)
- AMBER: correlation Gustavo Pierdominici Sottile (Thu Feb 24 2005 - 13:48:50 CST)
- Re: AMBER: Joining residues/units David A. Case (Thu Feb 24 2005 - 14:54:37 CST)
- Re: AMBER: Joining residues/units Bogos Agianian (Thu Feb 24 2005 - 15:22:07 CST)
- AMBER: pmemd + pgi 5.1 + ntr = 1 Peter Varnai (Thu Feb 24 2005 - 16:25:04 CST)
- Re: AMBER: pmemd + pgi 5.1 + ntr = 1 Robert Duke (Thu Feb 24 2005 - 16:38:02 CST)
- Re: AMBER: pmemd + pgi 5.1 + ntr = 1 Peter Varnai (Thu Feb 24 2005 - 16:59:16 CST)
- Re: AMBER: pmemd + pgi 5.1 + ntr = 1 Robert Duke (Thu Feb 24 2005 - 17:22:37 CST)
- Re: AMBER: parallel AMBER/pmemd installation problem on Opteron Lars Packschies (Thu Feb 24 2005 - 17:58:25 CST)
- Re: AMBER: ambpdb radii David A. Case (Thu Feb 24 2005 - 18:56:40 CST)
- AMBER: Does delta.charge mean "final charge" for a dummy atom? Eric Hu (Thu Feb 24 2005 - 19:22:23 CST)
- Re: AMBER: Does delta.charge mean "final charge" for a dummy atom? David A. Case (Thu Feb 24 2005 - 20:31:04 CST)
- Re: AMBER: parallel AMBER/pmemd installation problem on Opteron Robert Duke (Thu Feb 24 2005 - 22:06:54 CST)
- AMBER: My last posting Robert Duke (Thu Feb 24 2005 - 22:15:08 CST)
- AMBER: compile amber8 on RHEL4 HuiZhe Li (Fri Feb 25 2005 - 01:59:02 CST)
- AMBER: nmode entropy calculations in MMPBSA Fabien Cailliez (Fri Feb 25 2005 - 04:20:23 CST)
- Re: AMBER: restraint only for Z cartegian coordinate? Jaroslav Hanus (Fri Feb 25 2005 - 05:12:48 CST)
- Re: AMBER: compile amber8 on RHEL4 Ye MEI (Fri Feb 25 2005 - 06:01:17 CST)
- AMBER: vlimit Gustavo Pierdominici Sottile (Fri Feb 25 2005 - 06:45:35 CST)
- Re: AMBER: compile amber8 on RHEL4 Tru Huynh (Fri Feb 25 2005 - 07:09:33 CST)
- Re: AMBER: nmode entropy calculations in MMPBSA david.evans_at_ulsop.ac.uk (Fri Feb 25 2005 - 08:14:55 CST)
- Re: AMBER: ambpdb radii Harianto (Fri Feb 25 2005 - 10:20:31 CST)
- Re: AMBER: ambpdb radii David A. Case (Fri Feb 25 2005 - 10:09:53 CST)
- Re: AMBER: solvateOct method David A. Case (Fri Feb 25 2005 - 10:53:19 CST)
- Re: AMBER: Joining residues/units FyD (Fri Feb 25 2005 - 11:13:29 CST)
- AMBER: make test.lmod error yuann (Fri Feb 25 2005 - 10:45:11 CST)
- Re: AMBER: make test.lmod error David A. Case (Fri Feb 25 2005 - 11:41:32 CST)
- Re: AMBER: ambpdb radii Harianto (Fri Feb 25 2005 - 12:41:59 CST)
- Re: AMBER: ambpdb radii David A. Case (Fri Feb 25 2005 - 12:15:57 CST)
- AMBER: setBox buffer in leap Stern, Julie (Fri Feb 25 2005 - 12:43:19 CST)
- AMBER: problem with solvateBox ReichertD_at_mir.wustl.edu (Fri Feb 25 2005 - 14:38:51 CST)
- Re: AMBER: problem with solvateBox David A. Case (Fri Feb 25 2005 - 15:41:38 CST)
- AMBER: Austin B. Yongye (Fri Feb 25 2005 - 15:43:56 CST)
- Re: AMBER: Does delta.charge mean "final charge" for a dummy atom? Eric Hu (Fri Feb 25 2005 - 18:38:05 CST)
- Re: AMBER: Antechamber/formatting question Kara Di Giorgio (Fri Feb 25 2005 - 18:43:36 CST)
- Re: AMBER: Antechamber/formatting question Ilyas Yildirim (Fri Feb 25 2005 - 19:31:46 CST)
- AMBER: vlimit problem Ilyas Yildirim (Fri Feb 25 2005 - 19:45:03 CST)
- Re: AMBER: Antechamber/formatting question Kara Di Giorgio (Fri Feb 25 2005 - 20:02:40 CST)
- AMBER: ico(i)=-1? Xiao He (Fri Feb 25 2005 - 21:49:46 CST)
- AMBER: Pyranose pucker parameters Austin B. Yongye (Fri Feb 25 2005 - 23:10:06 CST)
- Re: AMBER: ico(i)=-1? Guanglei Cui (Sat Feb 26 2005 - 09:42:08 CST)
- RE: AMBER: Pyranose pucker parameters Ross Walker (Sun Feb 27 2005 - 13:58:30 CST)
- RE: AMBER: Antechamber/formatting question Ross Walker (Sun Feb 27 2005 - 13:56:18 CST)
- Re: AMBER: Antechamber/formatting question Kara Di Giorgio (Sun Feb 27 2005 - 19:13:19 CST)
- RE: AMBER: Pyranose pucker parameters Austin B. Yongye (Sun Feb 27 2005 - 21:08:52 CST)
- Re: AMBER: Antechamber/formatting question FyD (Sun Feb 27 2005 - 22:12:37 CST)
- Re: AMBER: Antechamber/formatting question FyD (Sun Feb 27 2005 - 22:43:23 CST)
- AMBER: Amber Poisson-Boltzmann MD :Equilibration Problem praveena moldy (Sun Feb 27 2005 - 23:36:36 CST)
- AMBER: GBSA calculation Stefano Federico Massimiliano Pieraccini (Stefano.Pieraccini) (Mon Feb 28 2005 - 04:59:23 CST)
- AMBER: creating a new residue Amber admin (Mon Feb 28 2005 - 10:44:59 CST)
- Re: AMBER: correlation David A. Case (Mon Feb 28 2005 - 11:32:54 CST)
- Re: AMBER: vlimit problem David A. Case (Mon Feb 28 2005 - 11:40:26 CST)
- Re: AMBER: GBSA calculation David A. Case (Mon Feb 28 2005 - 11:48:24 CST)
- Re: AMBER: PDB conversion to gzmat using antechamber David A. Case (Mon Feb 28 2005 - 12:02:58 CST)
- Re: AMBER: Amber8 Solaris installation failure Joe Nolan (Mon Feb 28 2005 - 14:24:28 CST)
- Re: AMBER: Amber8 Solaris installation failure M. L. Dodson (Mon Feb 28 2005 - 14:55:47 CST)
- Re: AMBER: Amber8 Solaris installation failure David A. Case (Mon Feb 28 2005 - 16:42:21 CST)
Last message date: Sat Dec 31 2005 - 12:51:27 CST
Archived on: Sat Dec 31 2005 - 12:51:45 CST
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