AMBER Archive (2005)

Subject: AMBER: DNA melting free energy calculation

From: lei jia (jial_at_broyde.nyu.edu)
Date: Thu Feb 03 2005 - 18:39:57 CST


Dear Amber users,

I am interested in using the MM-PBSA method to compute the DNA melting
free energy using simulation for duplexes and single strands. I wonder
if any one has any experience with this? I would appreciate any advice.

Lei

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