AMBER Archive (2005)

Subject: AMBER: protonate and input conversion error

From: Stern, Julie (jvstern_at_bnl.gov)
Date: Thu Feb 03 2005 - 10:48:20 CST

Hello,
    I'm effectively making a new residue. I tried to protonate and got the
following errors. All of the atoms have new names as well as a new residue
type, but according to your tutorial 4, a new atom name shouldn't deter
protonate. Can you explain what I'm doing wrong?

Thanks.

--julie

localhost 26% $AMBERHOME/exe/protonate -k -d $AMBERHOME/dat/PROTON_INFO -i
test.pdb -o testh.pdb -l protonate.out
forrtl: severe (64): input conversion error, unit -5, file Internal
Formatted Read
Image PC Routine Line Source
protonate 080941D0 Unknown Unknown Unknown
protonate 08093CC8 Unknown Unknown Unknown
protonate 08072295 Unknown Unknown Unknown
protonate 08051BDC Unknown Unknown Unknown
protonate 0805207F Unknown Unknown Unknown
protonate 0805F3C4 Unknown Unknown Unknown
protonate 0804A369 Unknown Unknown Unknown
protonate 08049F38 Unknown Unknown Unknown
Unknown 0027A79D Unknown Unknown Unknown

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