AMBER Archive (2005)

Subject: AMBER: Carnal in Amber8

From: Vlad Cojocaru (Vlad.Cojocaru_at_mpi-bpc.mpg.de)
Date: Tue Feb 01 2005 - 10:11:09 CST

Dear Amber users,
    Is there available a carnal version that is compatible with amber8?
I have troubles in reading trajectory files created with ptraj (from
amber8) in Carnal of Amber7. I am asking this because Carnal had some
very nice features like defining planes and calculating distances and
angles between planes. I had some scripts built for this purpose and I
was trying to use them on new trajectories but Carnal does not load
properly these new trajectories created with ptraj after processing.
    I would be grateful if somebody can give me an advice on this? Could
ptraj do the same things as Carnal?
Thanks a lot
vlad 

-- 
Vlad Cojocaru 
Max Planck Institute for Biophysical Chemistry 
Department: 060 
Am Fassberg 11, 37077 Goettingen, Germany 
tel: ++49-551-201.1327 
e-mail: Vlad.Cojocaru_at_mpi-bpc.mpg.de
home tel: ++49-551-9963204  

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