AMBER Archive (2004) - Jul 2004 By DateMost recent messages
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About this archive
Starting: Thu Jul 01 2004 - 00:02:17 CDT
Ending: Fri Jul 30 2004 - 22:55:14 CDT
- Re: AMBER: problems in using glycam Wen-Chi Tseng (Thu Jul 01 2004 - 07:44:27 CDT)
- Re: AMBER: Problems with processing SYBYL-Tripos pdb files in LEAP Cenk Andac (Thu Jul 01 2004 - 00:02:17 CDT)
- Re: AMBER: Amber 8 installation error fangyu liang (Thu Jul 01 2004 - 02:53:21 CDT)
- AMBER: Implicit MD simulation yen li (Thu Jul 01 2004 - 06:49:24 CDT)
- Re: AMBER: Implicit MD simulation Carlos Simmerling (Thu Jul 01 2004 - 07:07:52 CDT)
- AMBER: average structure using ptraj NI AI (Thu Jul 01 2004 - 11:18:34 CDT)
- Re: AMBER: average structure using ptraj Thomas E. Cheatham, III (Thu Jul 01 2004 - 12:40:25 CDT)
- Re: AMBER: N-terminal Arg charges in ff99 not 1.00 Michael Dolan (Thu Jul 01 2004 - 14:00:45 CDT)
- Re: AMBER: N-terminal Arg charges in ff99 not 1.00 Michael Dolan (Thu Jul 01 2004 - 14:04:37 CDT)
- Re: AMBER: N-terminal Arg charges in ff99 not 1.00 David A. Case (Thu Jul 01 2004 - 14:17:52 CDT)
- RE: AMBER: N-terminal Arg charges in ff99 not 1.00 Ross Walker (Thu Jul 01 2004 - 14:17:02 CDT)
- Re: AMBER: N-terminal Arg charges in ff99 not 1.00 Michael Dolan (Thu Jul 01 2004 - 14:57:37 CDT)
- RE: AMBER: N-terminal Arg charges in ff99 not 1.00 Ross Walker (Thu Jul 01 2004 - 15:13:00 CDT)
- AMBER: no 'water.lib' in /amber8/dat/leap/ fangyu liang (Thu Jul 01 2004 - 15:21:50 CDT)
- RE: AMBER: no 'water.lib' in /amber8/dat/leap/ Ross Walker (Thu Jul 01 2004 - 15:30:25 CDT)
- Re: AMBER: no 'water.lib' in /amber8/dat/leap/ Rhonda Torres (Thu Jul 01 2004 - 15:25:15 CDT)
- AMBER: MAXRMSPT error in MOIL-view Robyn Ayscue (Thu Jul 01 2004 - 17:19:23 CDT)
- Re: AMBER: MAXRMSPT error in MOIL-view Carlos Simmerling (Thu Jul 01 2004 - 17:26:53 CDT)
- AMBER: tleap input file error fangyu liang (Thu Jul 01 2004 - 18:26:18 CDT)
- Re: AMBER: tleap input file error David A. Case (Thu Jul 01 2004 - 19:06:18 CDT)
- AMBER: peptide-DNA crosslink modeling M. L. Dodson (Thu Jul 01 2004 - 16:51:24 CDT)
- Re: AMBER: peptide-DNA crosslink modeling Carlos Simmerling (Thu Jul 01 2004 - 20:42:48 CDT)
- Re: AMBER: peptide-DNA crosslink modeling David A. Case (Fri Jul 02 2004 - 00:01:40 CDT)
- AMBER: mm_pbsa problem steven.j.enoch_at_gsk.com (Fri Jul 02 2004 - 05:29:57 CDT)
- Re: AMBER: mm_pbsa problem david.evans_at_ulsop.ac.uk (Fri Jul 02 2004 - 05:53:23 CDT)
- Re: AMBER: mm_pbsa problem David A. Case (Fri Jul 02 2004 - 09:52:46 CDT)
- Re: AMBER: average structure using ptraj NI AI (Fri Jul 02 2004 - 10:15:53 CDT)
- Re: AMBER: average structure using ptraj Chris Moth (Fri Jul 02 2004 - 12:11:42 CDT)
- Re: AMBER: peptide-DNA crosslink modeling M. L. Dodson (Fri Jul 02 2004 - 13:06:39 CDT)
- AMBER: question about antechamber program Sivanesan Dakshanamurthy (Fri Jul 02 2004 - 13:42:07 CDT)
- Re: AMBER: question about antechamber program David A. Case (Fri Jul 02 2004 - 15:26:12 CDT)
- AMBER: Protein MD yen li (Sat Jul 03 2004 - 11:04:59 CDT)
- AMBER: best PC laptop system to run Amber 8 fangyu liang (Sat Jul 03 2004 - 16:05:35 CDT)
- Re: AMBER: best PC laptop system to run Amber 8 Andreas Svrcek-Seiler (Sun Jul 04 2004 - 07:24:07 CDT)
- Re: AMBER: About TI with sander Chunhu Tan (Sun Jul 04 2004 - 20:18:48 CDT)
- Re: AMBER: best PC laptop system to run Amber 8 fangyu liang (Mon Jul 05 2004 - 00:04:41 CDT)
- AMBER: Problem to converge minimization Guillaume Bollot (Mon Jul 05 2004 - 03:41:06 CDT)
- AMBER: Namelist problem Vlad Cojocaru (Mon Jul 05 2004 - 04:25:07 CDT)
- AMBER: details for Namelist problem Vlad Cojocaru (Mon Jul 05 2004 - 04:48:40 CDT)
- AMBER: combination rules German Sciaini (Mon Jul 05 2004 - 07:31:43 CDT)
- Re: AMBER: Problem to converge minimization Jiten (Mon Jul 05 2004 - 07:38:26 CDT)
- Re: AMBER: Namelist problem Guanglei Cui (Mon Jul 05 2004 - 07:56:10 CDT)
- Re: AMBER: Namelist problem Vlad Cojocaru (Mon Jul 05 2004 - 08:10:51 CDT)
- AMBER: details for Namelist problem Vlad Cojocaru (Mon Jul 05 2004 - 08:22:33 CDT)
- AMBER: leap problem in AMBER7 (residue insertion) Kuhn, Bernd {PRBD~Basel} (Mon Jul 05 2004 - 06:26:34 CDT)
- Re: AMBER: Namelist problem Viktor Hornak (Mon Jul 05 2004 - 09:07:36 CDT)
- AMBER: Amber8 on Digital UNIX Guillermo Mulliert Carlín (Mon Jul 05 2004 - 10:30:15 CDT)
- Re: AMBER: Problem to converge minimization David A. Case (Mon Jul 05 2004 - 10:22:01 CDT)
- Re: AMBER: Namelist problem David A. Case (Mon Jul 05 2004 - 10:21:12 CDT)
- Re: AMBER: About TI with sander David A. Case (Mon Jul 05 2004 - 10:31:23 CDT)
- AMBER: multiple heat bath GB+LES Marcin Krol (Mon Jul 05 2004 - 11:53:31 CDT)
- Re: AMBER: Amber8 on Digital UNIX David A. Case (Mon Jul 05 2004 - 11:55:20 CDT)
- Re: AMBER: leap problem in AMBER7 (residue insertion) David A. Case (Mon Jul 05 2004 - 12:21:50 CDT)
- Re: AMBER: combination rules David A. Case (Mon Jul 05 2004 - 12:29:04 CDT)
- AMBER: "closestwater" algorithm Grace Li (Mon Jul 05 2004 - 17:42:08 CDT)
- AMBER: How to make leap recognise Zn2+? Yongzhi Chen (Mon Jul 05 2004 - 20:41:26 CDT)
- AMBER: sander on multiprocessors cailliez (Tue Jul 06 2004 - 02:38:39 CDT)
- Re: AMBER: sander on multiprocessors Stef (Tue Jul 06 2004 - 03:42:36 CDT)
- Re: AMBER: sander on multiprocessors Andreas Svrcek-Seiler (Tue Jul 06 2004 - 06:15:48 CDT)
- Re: AMBER: How to make leap recognise Zn2+? Guanglei Cui (Tue Jul 06 2004 - 08:58:27 CDT)
- AMBER: idecomp Marcela Madrid (Tue Jul 06 2004 - 10:42:20 CDT)
- Re: AMBER: How to make leap recognise Zn2+? Yongzhi Chen (Tue Jul 06 2004 - 11:00:26 CDT)
- Re: AMBER: idecomp David A. Case (Tue Jul 06 2004 - 11:37:42 CDT)
- AMBER: running MD simulatons sachin patil (Tue Jul 06 2004 - 11:52:58 CDT)
- AMBER: Amber7 bugfix1 sachin patil (Tue Jul 06 2004 - 12:47:38 CDT)
- RE: AMBER: Amber7 bugfix1 Ross Walker (Tue Jul 06 2004 - 13:17:49 CDT)
- Re: AMBER: running MD simulatons David A. Case (Tue Jul 06 2004 - 13:40:50 CDT)
- Re: AMBER: Amber7 bugfix1 David A. Case (Tue Jul 06 2004 - 13:37:04 CDT)
- AMBER: charge problem in minimization yen li (Wed Jul 07 2004 - 01:33:09 CDT)
- Re: AMBER: Amber8 on Digital UNIX Guillermo Mulliert Carlín (Wed Jul 07 2004 - 04:41:53 CDT)
- AMBER: parameter development for nucleotide analogues Vlad Cojocaru (Wed Jul 07 2004 - 05:37:50 CDT)
- AMBER: name error Prashansa Agrawal (Wed Jul 07 2004 - 17:57:53 CDT)
- AMBER: Namelist problem solved Vlad Cojocaru (Wed Jul 07 2004 - 06:09:16 CDT)
- AMBER: Molecular dynamic bybaker_at_itsa.ucsf.edu (Wed Jul 07 2004 - 16:12:33 CDT)
- AMBER: My strange result of TI. Chunhu Tan (Wed Jul 07 2004 - 18:35:19 CDT)
- AMBER: correlation in Amber 8 Bimo Ario Tejo (Thu Jul 08 2004 - 03:14:34 CDT)
- AMBER: segmentation fault in leap anshul_at_imtech.res.in (Thu Jul 08 2004 - 16:40:42 CDT)
- Re: AMBER: segmentation fault in leap Guillermo Mulliert Carlín (Thu Jul 08 2004 - 07:02:05 CDT)
- Re: AMBER: segmentation fault in leap anshul_at_imtech.res.in (Thu Jul 08 2004 - 20:17:40 CDT)
- AMBER: ptraj Wen Li (Thu Jul 08 2004 - 11:06:01 CDT)
- AMBER: question about Ptraj jz7_at_duke.edu (Thu Jul 08 2004 - 11:32:07 CDT)
- RE: AMBER: question about Ptraj Ross Walker (Thu Jul 08 2004 - 11:47:28 CDT)
- Re: AMBER: question about Ptraj Thomas E. Cheatham, III (Thu Jul 08 2004 - 11:56:04 CDT)
- AMBER: weird box expansion Herbert Georg (Thu Jul 08 2004 - 11:57:57 CDT)
- RE: AMBER: ptraj Ross Walker (Thu Jul 08 2004 - 12:01:43 CDT)
- RE: AMBER: segmentation fault in leap Ross Walker (Thu Jul 08 2004 - 12:07:28 CDT)
- Re: AMBER: weird box expansion Thomas E. Cheatham, III (Thu Jul 08 2004 - 12:06:57 CDT)
- AMBER: problems with mdcrd Carsten Detering (Thu Jul 08 2004 - 12:16:04 CDT)
- RE: AMBER: Molecular dynamic Ross Walker (Thu Jul 08 2004 - 12:24:21 CDT)
- RE: AMBER: problems with mdcrd Ross Walker (Thu Jul 08 2004 - 12:32:04 CDT)
- RE: AMBER: name error Ross Walker (Thu Jul 08 2004 - 12:35:46 CDT)
- Re: AMBER: weird box expansion Herbert Georg (Thu Jul 08 2004 - 12:38:01 CDT)
- RE: AMBER: charge problem in minimization Ross Walker (Thu Jul 08 2004 - 12:40:56 CDT)
- AMBER: parameter development for nucleotide analogues Vlad Cojocaru (Thu Jul 08 2004 - 12:49:42 CDT)
- RE: AMBER: parameter development for nucleotide analogues Ross Walker (Thu Jul 08 2004 - 12:49:33 CDT)
- AMBER: namelist problem solved Vlad Cojocaru (Thu Jul 08 2004 - 12:50:10 CDT)
- Re: AMBER: idecomp Marcela Madrid (Thu Jul 08 2004 - 14:35:57 CDT)
- AMBER: average using ptraj Holly Freedman (Thu Jul 08 2004 - 14:13:58 CDT)
- RE: AMBER: problems with mdcrd Ross Walker (Thu Jul 08 2004 - 14:54:08 CDT)
- RE: AMBER: average using ptraj Ross Walker (Thu Jul 08 2004 - 15:18:58 CDT)
- Re: AMBER: name error David A. Case (Thu Jul 08 2004 - 15:54:48 CDT)
- Re: AMBER: charge problem in minimization David A. Case (Thu Jul 08 2004 - 15:54:54 CDT)
- AMBER: Problem with sander - Error on Open Mike (Thu Jul 08 2004 - 16:38:37 CDT)
- RE: AMBER: Problem with sander - Error on Open Ross Walker (Thu Jul 08 2004 - 17:15:04 CDT)
- RE: AMBER: Problem with sander - Error on Open Mike (Thu Jul 08 2004 - 20:57:43 CDT)
- RE: AMBER: Problem with sander - Error on Open Thomas E. Cheatham, III (Thu Jul 08 2004 - 21:18:10 CDT)
- AMBER: how to calculate E-pot from restart file? J. Zhang, Dr (Thu Jul 08 2004 - 22:13:44 CDT)
- Re: AMBER: how to calculate E-pot from restart file? David A. Case (Thu Jul 08 2004 - 23:07:49 CDT)
- AMBER: execution time cailliez (Fri Jul 09 2004 - 04:50:25 CDT)
- AMBER: cys protecting group parameters Stefano.Pieraccini_at_unimi.it (Fri Jul 09 2004 - 08:48:36 CDT)
- AMBER: cys protecting groups parameters Stefano.Pieraccini_at_unimi.it (Fri Jul 09 2004 - 07:41:20 CDT)
- AMBER: Setup for parallel computing fangyu liang (Fri Jul 09 2004 - 12:00:32 CDT)
- AMBER: Disulfide bond command bybaker_at_itsa.ucsf.edu (Fri Jul 09 2004 - 13:16:13 CDT)
- RE: AMBER: Disulfide bond command Ross Walker (Fri Jul 09 2004 - 13:27:13 CDT)
- RE: AMBER: execution time Ross Walker (Fri Jul 09 2004 - 13:52:08 CDT)
- Re: AMBER: Disulfide bond command bybaker_at_itsa.ucsf.edu (Fri Jul 09 2004 - 13:51:46 CDT)
- Re: AMBER: Molecular dynamic bybaker_at_itsa.ucsf.edu (Fri Jul 09 2004 - 17:54:38 CDT)
- AMBER: MD simulation : problem sachin patil (Sat Jul 10 2004 - 00:08:15 CDT)
- RE: AMBER: MD simulation : problem Ross Walker (Sat Jul 10 2004 - 00:35:14 CDT)
- AMBER: About the calculation of non-bond list Wu Lei (Sat Jul 10 2004 - 09:21:57 CDT)
- AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Sat Jul 10 2004 - 10:30:15 CDT)
- AMBER: ptraj-closestwaters command Grace Li (Sat Jul 10 2004 - 11:14:34 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Mark Williamson (Sat Jul 10 2004 - 12:54:56 CDT)
- Re: AMBER: Setup for parallel computing Stef (Sat Jul 10 2004 - 16:14:56 CDT)
- Re: AMBER: Setup for parallel computing fangyu liang (Sat Jul 10 2004 - 18:10:19 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler David A. Case (Sat Jul 10 2004 - 22:46:57 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Sun Jul 11 2004 - 00:04:35 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Sun Jul 11 2004 - 00:24:27 CDT)
- AMBER: Rigid counteranion during MD !! Jiten (Sun Jul 11 2004 - 03:26:35 CDT)
- Re: AMBER: Rigid counteranion during MD !! Jiten (Sun Jul 11 2004 - 09:51:48 CDT)
- RE: AMBER: MD simulation : problem sachin patil (Sun Jul 11 2004 - 10:08:13 CDT)
- RE: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Ross Walker (Sun Jul 11 2004 - 13:38:49 CDT)
- RE: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Mark Williamson (Sun Jul 11 2004 - 15:52:45 CDT)
- RE: AMBER: MD simulation : problem Ross Walker (Sun Jul 11 2004 - 19:41:11 CDT)
- AMBER: solvation free energy hj zou (Fri Jul 09 2004 - 02:38:39 CDT)
- Re: Re: AMBER: xleap problem hj zou (Sun Jul 11 2004 - 01:16:19 CDT)
- AMBER: hj zou (Sun Jul 11 2004 - 01:16:17 CDT)
- AMBER: solvation free energy hj zou (Sun Jul 11 2004 - 01:16:19 CDT)
- RE: AMBER: MD simulation : problem sachin patil (Sun Jul 11 2004 - 23:53:51 CDT)
- AMBER: Fe parameter hj zou (Mon Jul 12 2004 - 02:09:29 CDT)
- Re: AMBER: Fe parameter Wu Lei (Mon Jul 12 2004 - 02:51:18 CDT)
- AMBER: Problems with CPU scaling on cluster Your Name (Mon Jul 12 2004 - 03:12:48 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Mon Jul 12 2004 - 04:36:36 CDT)
- AMBER: RNA sequence with DNA backbone? Arvind (Mon Jul 12 2004 - 06:26:36 CDT)
- Re: AMBER: Fe parameter scopio (Mon Jul 12 2004 - 09:18:52 CDT)
- Re: AMBER: xleap problem scopio (Mon Jul 12 2004 - 09:09:47 CDT)
- Re: Re: AMBER: xleap problem hj zou (Mon Jul 12 2004 - 09:56:55 CDT)
- AMBER: question about Ptraj - AND OR james tomomi macdonald (Mon Jul 12 2004 - 10:06:59 CDT)
- Re: AMBER: question about Ptraj - AND OR Thomas E. Cheatham, III (Mon Jul 12 2004 - 10:15:13 CDT)
- AMBER: what is averaged RMS fluctuation? jz7_at_duke.edu (Mon Jul 12 2004 - 11:17:30 CDT)
- Re: AMBER: question about Ptraj - AND OR Herr/Seńor/Monsieur/Mister Gregory (Mon Jul 12 2004 - 11:15:47 CDT)
- Re: AMBER: solvation free energy Ray Luo (Sun Jul 11 2004 - 21:25:44 CDT)
- RE: AMBER: MD simulation : problem Ross Walker (Mon Jul 12 2004 - 12:55:33 CDT)
- RE: AMBER: Molecular dynamic Ross Walker (Mon Jul 12 2004 - 13:12:53 CDT)
- RE: AMBER: Fe parameter Ross Walker (Mon Jul 12 2004 - 13:19:23 CDT)
- RE: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Scott Brozell (Mon Jul 12 2004 - 13:30:39 CDT)
- RE: AMBER: Problems with CPU scaling on cluster Ross Walker (Mon Jul 12 2004 - 13:38:27 CDT)
- RE: AMBER: what is averaged RMS fluctuation? Ross Walker (Mon Jul 12 2004 - 13:51:47 CDT)
- RE: AMBER: what is averaged RMS fluctuation? jz7_at_duke.edu (Mon Jul 12 2004 - 14:59:26 CDT)
- RE: AMBER: what is averaged RMS fluctuation? Thomas E. Cheatham, III (Mon Jul 12 2004 - 15:28:21 CDT)
- Re: AMBER: what is averaged RMS fluctuation? Carlos Simmerling (Mon Jul 12 2004 - 15:37:13 CDT)
- Re: AMBER: RNA sequence with DNA backbone? David A. Case (Mon Jul 12 2004 - 15:35:43 CDT)
- Re: AMBER: ptraj-closestwaters command Thomas E. Cheatham, III (Mon Jul 12 2004 - 15:38:41 CDT)
- RE: AMBER: what is averaged RMS fluctuation? Ross Walker (Mon Jul 12 2004 - 15:40:23 CDT)
- AMBER: About the free energy difference in vacuum with GIBBS. Chunhu Tan (Mon Jul 12 2004 - 17:34:35 CDT)
- AMBER: Jiten (Tue Jul 13 2004 - 04:25:53 CDT)
- RE: AMBER: Molecular dynamic Andy Purkiss (Tue Jul 13 2004 - 04:21:02 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Tue Jul 13 2004 - 04:52:06 CDT)
- Re: AMBER: Problem amber8 compilation in Opteron(Linux) with PGI-workstation compiler Jiten (Tue Jul 13 2004 - 04:46:57 CDT)
- AMBER: Angle restraint during MD Jiten (Tue Jul 13 2004 - 04:28:14 CDT)
- Re: AMBER: Angle restraint during MD Carlos Simmerling (Tue Jul 13 2004 - 07:00:42 CDT)
- Re: AMBER: Carlos Simmerling (Tue Jul 13 2004 - 06:59:08 CDT)
- Re: AMBER: solvate proteins in xleap/amber8 Ting Wang (Tue Jul 13 2004 - 07:23:51 CDT)
- AMBER: Use of ibelly with nmode analysis steven.j.enoch_at_gsk.com (Tue Jul 13 2004 - 08:30:30 CDT)
- RE: AMBER: MD simulation : problem :THANK YOU sachin patil (Tue Jul 13 2004 - 09:51:28 CDT)
- AMBER: torsion scan Guanglei Cui (Tue Jul 13 2004 - 10:18:32 CDT)
- RE: AMBER: Molecular dynamic Joseph Nachman (Tue Jul 13 2004 - 10:21:09 CDT)
- Re: AMBER: Angle restraint during MD Jiten (Tue Jul 13 2004 - 11:21:28 CDT)
- Re: AMBER: Use of ibelly with nmode analysis David A. Case (Tue Jul 13 2004 - 11:24:27 CDT)
- AMBER: (no subject) anshul_at_imtech.res.in (Tue Jul 13 2004 - 22:40:08 CDT)
- RE: AMBER: (no subject) Ross Walker (Tue Jul 13 2004 - 12:32:22 CDT)
- AMBER: Parameter generation from RESP charges anshul_at_imtech.res.in (Tue Jul 13 2004 - 23:02:07 CDT)
- Re: AMBER: torsion scan Furse, Kristina Elisabet (Tue Jul 13 2004 - 12:37:35 CDT)
- Re: AMBER: Angle restraint during MD Carlos Simmerling (Tue Jul 13 2004 - 12:47:16 CDT)
- Re: AMBER: Molecular dynamic & Acknowledgement bybaker_at_itsa.ucsf.edu (Tue Jul 13 2004 - 13:20:50 CDT)
- AMBER: anisotropic scaling Xiang, Tian-Xiang (Tue Jul 13 2004 - 14:12:32 CDT)
- RE: AMBER: anisotropic scaling Ross Walker (Tue Jul 13 2004 - 14:39:05 CDT)
- Re: AMBER: anisotropic scaling David A. Case (Tue Jul 13 2004 - 15:43:02 CDT)
- Re: AMBER: torsion scan David A. Case (Tue Jul 13 2004 - 15:47:00 CDT)
- Re: AMBER: torsion scan Guanglei Cui (Tue Jul 13 2004 - 16:12:50 CDT)
- AMBER: How to apply OPLS force field? Wu Lei (Tue Jul 13 2004 - 22:23:04 CDT)
- Re: AMBER: Angle restraint during MD Jiten (Wed Jul 14 2004 - 00:51:42 CDT)
- Re: AMBER: RNA sequence with DNA backbone? Arvind (Wed Jul 14 2004 - 05:50:29 CDT)
- AMBER: Implicit MD problem yen li (Wed Jul 14 2004 - 06:01:39 CDT)
- Re: AMBER: RNA sequence with DNA backbone? Vlad Cojocaru (Wed Jul 14 2004 - 06:09:13 CDT)
- Re: AMBER: leap problem in AMBER7 (residue insertion) Kuhn, Bernd {PRBD~Basel} (Wed Jul 14 2004 - 06:44:00 CDT)
- Re: AMBER: How to apply OPLS force field? mcpreto_at_fc.up.pt (Wed Jul 14 2004 - 08:26:04 CDT)
- Re: AMBER: Angle restraint during MD Carlos Simmerling (Wed Jul 14 2004 - 08:39:38 CDT)
- Re: AMBER: Implicit MD problem Carlos Simmerling (Wed Jul 14 2004 - 08:42:18 CDT)
- AMBER: Problem with divcon - increasing MXATTS? steven.j.enoch_at_gsk.com (Wed Jul 14 2004 - 10:33:38 CDT)
- Re: AMBER: Problem with divcon - increasing MXATTS? Kennie Merz (Wed Jul 14 2004 - 11:01:54 CDT)
- Re: AMBER: Angle restraint during MD and namelist problem in amber8 Jiten (Wed Jul 14 2004 - 11:13:38 CDT)
- Re: AMBER: Angle restraint during MD and namelist problem in amber8 Thomas E. Cheatham, III (Wed Jul 14 2004 - 11:22:26 CDT)
- Re: AMBER: How to apply OPLS force field? Sichun Yang (Wed Jul 14 2004 - 11:21:41 CDT)
- Re: AMBER: Implicit MD problem David A. Case (Wed Jul 14 2004 - 11:29:47 CDT)
- Re: AMBER: How to apply OPLS force field? David A. Case (Wed Jul 14 2004 - 11:29:59 CDT)
- Re: AMBER: Implicit MD problem yen li (Wed Jul 14 2004 - 11:44:47 CDT)
- Re: AMBER: Problem with divcon - increasing MXATTS? steven.j.enoch_at_gsk.com (Wed Jul 14 2004 - 11:45:54 CDT)
- Re: AMBER: Implicit MD problem Carlos Simmerling (Wed Jul 14 2004 - 11:53:31 CDT)
- Re: AMBER: Problem with divcon - increasing MXATTS? Kennie Merz (Wed Jul 14 2004 - 12:03:32 CDT)
- RE: AMBER: Problem with divcon - increasing MXATTS? Ross Walker (Wed Jul 14 2004 - 13:13:19 CDT)
- RE: AMBER: (no subject) Ross Walker (Wed Jul 14 2004 - 13:33:38 CDT)
- RE: AMBER: (no subject) FyD (Wed Jul 14 2004 - 14:30:04 CDT)
- AMBER: Enthalpy of solvent-solute vanderWaals Scott (Wed Jul 14 2004 - 14:56:45 CDT)
- Re: AMBER: About the free energy difference in vacuum with GIBBS. David A. Case (Wed Jul 14 2004 - 15:51:38 CDT)
- AMBER: ptraj Wen Li (Wed Jul 14 2004 - 16:07:11 CDT)
- AMBER: tleap - FATAL error Sivanesan Dakshanamurthy (Wed Jul 14 2004 - 16:28:41 CDT)
- Re: AMBER: tleap - FATAL error Scott Brozell (Wed Jul 14 2004 - 16:44:41 CDT)
- Re: AMBER: How to apply OPLS force field? Wu Lei (Wed Jul 14 2004 - 23:12:50 CDT)
- RE: AMBER: How to apply OPLS force field? Ross Walker (Wed Jul 14 2004 - 23:20:58 CDT)
- AMBER: Normal mode calculation with periodic boundary condition Johnson Agbo (Thu Jul 15 2004 - 00:15:09 CDT)
- Re: AMBER: How to apply OPLS force field? Wu Lei (Thu Jul 15 2004 - 02:45:31 CDT)
- AMBER: announcing normal mode analysis web server ElNemo Karsten Suhre (Thu Jul 15 2004 - 03:21:07 CDT)
- AMBER: Correl in Amber8: Diagonal elements not 1? Bimo Ario Tejo (Thu Jul 15 2004 - 06:47:43 CDT)
- Re: AMBER: xleap solvatebox/oct problem Jiten (Thu Jul 15 2004 - 10:18:59 CDT)
- AMBER: Problems with amber8 and pgf90 Marc Perea (Thu Jul 15 2004 - 05:30:36 CDT)
- RE: AMBER: How to apply OPLS force field? Bill Ross (Thu Jul 15 2004 - 11:08:22 CDT)
- Re: AMBER: Problems with amber8 and pgf90 Scott Brozell (Thu Jul 15 2004 - 11:23:44 CDT)
- Re: AMBER: xleap solvatebox/oct problem David A. Case (Thu Jul 15 2004 - 12:02:11 CDT)
- Re: AMBER: How to apply OPLS force field? David A. Case (Thu Jul 15 2004 - 12:04:22 CDT)
- Re: AMBER: Normal mode calculation with periodic boundary condition David A. Case (Thu Jul 15 2004 - 12:04:07 CDT)
- AMBER: antechamber Xin Hu (Thu Jul 15 2004 - 13:03:44 CDT)
- RE: AMBER: antechamber Ross Walker (Thu Jul 15 2004 - 13:21:44 CDT)
- RE: AMBER: Problems with CPU scaling on cluster Ross Walker (Thu Jul 15 2004 - 13:48:15 CDT)
- Re: AMBER: antechamber Xin Hu (Thu Jul 15 2004 - 15:57:09 CDT)
- Re: AMBER: antechamber David A. Case (Thu Jul 15 2004 - 18:30:26 CDT)
- AMBER: pH effect on protein folding Rukman Hertadi (Thu Jul 15 2004 - 21:00:54 CDT)
- AMBER: Amber8: Vlimit problem again Yuhui Cheng (Thu Jul 15 2004 - 21:34:58 CDT)
- Re: AMBER: antechamber Xin Hu (Thu Jul 15 2004 - 21:51:26 CDT)
- Re: AMBER: pH effect on protein folding Bimo Ario Tejo (Thu Jul 15 2004 - 22:34:39 CDT)
- AMBER: Is it a bug?(in prep file opls_unict.in) Wu Lei (Thu Jul 15 2004 - 22:44:09 CDT)
- AMBER: NB pairs exceeds? Chen (Fri Jul 16 2004 - 02:35:16 CDT)
- Re: AMBER: NB pairs exceeds? Wu Lei (Fri Jul 16 2004 - 03:07:56 CDT)
- Re: Re: AMBER: NB pairs exceeds? Chen (Fri Jul 16 2004 - 03:40:42 CDT)
- Re: AMBER: xleap solvatebox/oct problem Jiten (Fri Jul 16 2004 - 04:07:09 CDT)
- Re: AMBER: Amber8: Vlimit problem again German Sciaini (Fri Jul 16 2004 - 08:12:59 CDT)
- Re: AMBER: Problems with CPU scaling on cluster David E. Konerding (Fri Jul 16 2004 - 10:46:01 CDT)
- Re: AMBER: antechamber David A. Case (Fri Jul 16 2004 - 11:16:14 CDT)
- Re: Re: AMBER: NB pairs exceeds? David A. Case (Fri Jul 16 2004 - 11:23:22 CDT)
- Re: AMBER: Amber8: Vlimit problem again David A. Case (Fri Jul 16 2004 - 11:26:06 CDT)
- Re: AMBER: Is it a bug?(in prep file opls_unict.in) David A. Case (Fri Jul 16 2004 - 11:27:41 CDT)
- AMBER: X-CA-CT-X dih. FF param ? FyD (Fri Jul 16 2004 - 12:08:26 CDT)
- Re: AMBER: X-CA-CT-X dih. FF param ? Guanglei Cui (Fri Jul 16 2004 - 12:24:46 CDT)
- Re: AMBER: antechamber Bill Ross (Fri Jul 16 2004 - 12:48:07 CDT)
- AMBER: question about production runs opitz_at_che.udel.edu (Fri Jul 16 2004 - 14:42:06 CDT)
- AMBER: RESP vs. AM1-BCC charges for isoprene Oliver Hucke (Fri Jul 16 2004 - 16:00:57 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Rhonda Torres (Fri Jul 16 2004 - 16:20:42 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Carsten Detering (Fri Jul 16 2004 - 16:37:22 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Carsten Detering (Fri Jul 16 2004 - 16:33:51 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Oliver Hucke (Fri Jul 16 2004 - 17:49:00 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Ilyas Yildirim (Fri Jul 16 2004 - 17:36:22 CDT)
- AMBER: Cubic Ice Johnson Agbo (Fri Jul 16 2004 - 20:08:14 CDT)
- Re: AMBER: Is it a bug?(in prep file opls_unict.in) Wu Lei (Sat Jul 17 2004 - 00:15:16 CDT)
- Re: Re: AMBER: NB pairs exceeds? csong_at_mail.sdu.edu.cn (Sat Jul 17 2004 - 05:10:23 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Joe Harriman (Sat Jul 17 2004 - 07:44:47 CDT)
- AMBER: Amber7 (8):FLUSH--FAILED:: Resource temporarily unavailable Jean-Christophe Ducom (Sat Jul 17 2004 - 15:01:47 CDT)
- Re: Re: AMBER: NB pairs exceeds? David A. Case (Sat Jul 17 2004 - 20:09:22 CDT)
- Re: Re: AMBER: NB pairs exceeds? csong_at_mail.sdu.edu.cn (Sun Jul 18 2004 - 03:28:27 CDT)
- AMBER: Re: Results from RED-II beta FyD (Sun Jul 18 2004 - 11:11:41 CDT)
- AMBER: vdw energy in minimization anshul_at_imtech.res.in (Mon Jul 19 2004 - 10:11:17 CDT)
- AMBER: Weird compiling problem in Amber 8 echanco_at_uci.edu (Mon Jul 19 2004 - 00:51:29 CDT)
- Re: AMBER: Weird compiling problem in Amber 8 fangyu liang (Mon Jul 19 2004 - 01:30:22 CDT)
- Re: AMBER: vdw energy in minimization carlos (Mon Jul 19 2004 - 07:13:30 CDT)
- Re: AMBER: Weird compiling problem in Amber 8 Scott Brozell (Mon Jul 19 2004 - 12:08:54 CDT)
- Re: AMBER: vdw energy in minimization anshul_at_imtech.res.in (Mon Jul 19 2004 - 22:44:30 CDT)
- Re: AMBER: solvation free energy Qizhi Cui (Mon Jul 19 2004 - 12:32:17 CDT)
- AMBER: .lib file error in tleap anita pachaimuthu (Mon Jul 19 2004 - 12:19:19 CDT)
- Re: AMBER: .lib file error in tleap Sébastien Osborne (Mon Jul 19 2004 - 13:15:11 CDT)
- Re: AMBER: vdw energy in minimization Carlos Simmerling (Mon Jul 19 2004 - 13:47:21 CDT)
- AMBER: antechamber - missing improper torsions O. Hucke (Mon Jul 19 2004 - 13:58:39 CDT)
- Re: AMBER: Weird compiling problem in Amber 8 Ray Luo (Mon Jul 19 2004 - 00:34:03 CDT)
- AMBER: A problem regarding constant pH calculation in Amber 8 Yongzhi Chen (Mon Jul 19 2004 - 20:54:43 CDT)
- AMBER: PB Bomb in pb_reslist(): maxnbr too small steven.j.enoch_at_gsk.com (Tue Jul 20 2004 - 08:00:59 CDT)
- Re: AMBER: antechamber - missing improper torsions German Sciaini (Tue Jul 20 2004 - 08:04:17 CDT)
- AMBER: antechamber - improper torsions Oliver Hucke (Tue Jul 20 2004 - 11:23:02 CDT)
- Re: AMBER: PB Bomb in pb_reslist(): maxnbr too small Ray Luo (Mon Jul 19 2004 - 07:22:26 CDT)
- AMBER: FW: missing bondi radii of Br and F for surface area calculation S. Frank Yan (Tue Jul 20 2004 - 12:30:13 CDT)
- AMBER: about GLYCAM prep files in AMBER Ozlem Demir (Tue Jul 20 2004 - 12:34:07 CDT)
- AMBER: Problem with sander tutorial. tarek mahfouz (Tue Jul 20 2004 - 14:09:44 CDT)
- RE: AMBER: Problem with sander tutorial. Ross Walker (Tue Jul 20 2004 - 15:16:28 CDT)
- AMBER: Bondi radii for BR and F in mm_pbsa calculation S. Frank Yan (Tue Jul 20 2004 - 18:01:03 CDT)
- Re: AMBER: Bondi radii for BR and F in mm_pbsa calculation Rhonda Torres (Tue Jul 20 2004 - 19:23:10 CDT)
- AMBER: Leap could not find atom type CK ÎâŔÚ (Tue Jul 20 2004 - 23:35:54 CDT)
- Re: AMBER: Is it a bug?(in prep file opls_unict.in) David A. Case (Wed Jul 21 2004 - 03:52:22 CDT)
- AMBER: Re: Re: AMBER: Is it a bug?(in prep file opls_unict.in) ÎâŔÚ (Wed Jul 21 2004 - 05:59:13 CDT)
- AMBER: atom out of bounds Venkata S Koppuravuri (Wed Jul 21 2004 - 08:25:25 CDT)
- Re: AMBER: Re: Re: AMBER: Is it a bug?(in prep file opls_unict.in) David A. Case (Wed Jul 21 2004 - 08:32:44 CDT)
- AMBER: Co-ordination error while running tleap anita pachaimuthu (Wed Jul 21 2004 - 10:12:12 CDT)
- RE: AMBER: antechamber - missing improper torsions Junmei Wang (Wed Jul 21 2004 - 11:11:04 CDT)
- AMBER: question about ptraj jz7_at_duke.edu (Wed Jul 21 2004 - 15:00:01 CDT)
- AMBER: What happen when sander reads charge increments from cpin file? Yongzhi Chen (Wed Jul 21 2004 - 15:24:51 CDT)
- Re: AMBER: question about ptraj Guanglei Cui (Wed Jul 21 2004 - 15:32:29 CDT)
- RE: AMBER: What happen when sander reads charge increments from cpin file? Ross Walker (Wed Jul 21 2004 - 15:41:45 CDT)
- AMBER: cut offs in amber? Grace Li (Wed Jul 21 2004 - 15:47:43 CDT)
- AMBER: amparm Vincent Bisetty (Wed Jul 21 2004 - 15:37:39 CDT)
- RE: AMBER: cut offs in amber? Ross Walker (Wed Jul 21 2004 - 16:05:02 CDT)
- RE: AMBER: amparm Ross Walker (Wed Jul 21 2004 - 16:11:29 CDT)
- RE: AMBER: cut offs in amber? Grace Li (Wed Jul 21 2004 - 16:20:40 CDT)
- Re: AMBER: cut offs in amber? Carlos Simmerling (Wed Jul 21 2004 - 16:32:18 CDT)
- RE: AMBER: cut offs in amber? Ross Walker (Wed Jul 21 2004 - 16:39:47 CDT)
- RE: AMBER: What happen when sander reads charge increments from cpin file? Yongzhi Chen (Wed Jul 21 2004 - 16:59:40 CDT)
- RE: AMBER: cut offs in amber? Grace Li (Wed Jul 21 2004 - 17:03:05 CDT)
- RE: AMBER: cut offs in amber? Ross Walker (Wed Jul 21 2004 - 17:10:09 CDT)
- Re: AMBER: Amber8: Vlimit problem again Yuhui Cheng (Wed Jul 21 2004 - 18:44:09 CDT)
- RE: AMBER: Amber8: Vlimit problem again Ross Walker (Wed Jul 21 2004 - 18:55:59 CDT)
- AMBER: sander tutorial mathew k varghese (Thu Jul 22 2004 - 07:16:33 CDT)
- Re: AMBER: sander tutorial Carlos Simmerling (Thu Jul 22 2004 - 07:33:08 CDT)
- RE: AMBER: RESP vs. AM1-BCC charges for isoprene ajakalian_at_lav.Boehringer-Ingelheim.com (Thu Jul 22 2004 - 07:43:16 CDT)
- AMBER: mutation of atoms Nelson Fonseca (Thu Jul 22 2004 - 07:41:22 CDT)
- AMBER: found unknown atflg PB Scott (Thu Jul 22 2004 - 08:38:33 CDT)
- AMBER: Xleap crash, problem with residue bonding opitz_at_che.udel.edu (Thu Jul 22 2004 - 09:24:35 CDT)
- Re: AMBER: found unknown atflg PB Holger Gohlke (Thu Jul 22 2004 - 09:56:38 CDT)
- RE: AMBER: Problem with sander tutorial. tarek mahfouz (Thu Jul 22 2004 - 11:59:42 CDT)
- AMBER: user force Myunggi Yi (Thu Jul 22 2004 - 12:00:16 CDT)
- AMBER: (no subject) myunggi_at_csit.fsu.edu (Thu Jul 22 2004 - 12:10:09 CDT)
- AMBER: atom out of bounds (fwd) Venkata S Koppuravuri (Thu Jul 22 2004 - 14:52:13 CDT)
- RE: AMBER: Problem with sander tutorial. Ross Walker (Thu Jul 22 2004 - 15:57:20 CDT)
- RE: AMBER: atom out of bounds (fwd) Ross Walker (Thu Jul 22 2004 - 15:54:52 CDT)
- Re: AMBER: user force Furse, Kristina Elisabet (Thu Jul 22 2004 - 16:07:46 CDT)
- RE: AMBER: Xleap crash, problem with residue bonding Ross Walker (Thu Jul 22 2004 - 16:31:22 CDT)
- Re: AMBER: user force Bill Ross (Thu Jul 22 2004 - 16:57:24 CDT)
- Re: AMBER: user force myunggi_at_csit.fsu.edu (Thu Jul 22 2004 - 16:48:28 CDT)
- RE: AMBER: Xleap crash, problem with residue bonding Bill Ross (Thu Jul 22 2004 - 16:55:58 CDT)
- RE: AMBER: user force Ross Walker (Thu Jul 22 2004 - 17:08:04 CDT)
- RE: AMBER: user force myunggi_at_csit.fsu.edu (Thu Jul 22 2004 - 17:25:50 CDT)
- Re: AMBER: user force Carlos Simmerling (Thu Jul 22 2004 - 17:28:42 CDT)
- RE: AMBER: user force Ross Walker (Thu Jul 22 2004 - 17:40:16 CDT)
- RE: AMBER: user force myunggi_at_csit.fsu.edu (Thu Jul 22 2004 - 18:26:14 CDT)
- AMBER: Ewald parameter range Johnson Agbo (Thu Jul 22 2004 - 19:16:08 CDT)
- RE: AMBER: Problem with sander tutorial. Scott (Thu Jul 22 2004 - 21:08:19 CDT)
- AMBER: sander : constraints to conserve hydrogen bonds sachin patil (Thu Jul 22 2004 - 23:15:04 CDT)
- Re: AMBER: sander : constraints to conserve hydrogen bonds Jiten (Fri Jul 23 2004 - 00:58:15 CDT)
- Re: AMBER: Ewald parameter range David A. Case (Fri Jul 23 2004 - 03:53:50 CDT)
- Re: AMBER: user force Carlos Simmerling (Fri Jul 23 2004 - 06:47:17 CDT)
- Re: AMBER: sander : constraints to conserve hydrogen bonds Carlos Simmerling (Fri Jul 23 2004 - 07:08:43 CDT)
- AMBER: pmemd. Osman Gani (Fri Jul 23 2004 - 12:09:55 CDT)
- Re: AMBER: RESP vs. AM1-BCC charges for isoprene Oliver Hucke (Fri Jul 23 2004 - 12:41:05 CDT)
- Re: AMBER: pmemd. Robert Duke (Fri Jul 23 2004 - 12:46:48 CDT)
- Re: AMBER: Ewald parameter range Johnson Agbo (Fri Jul 23 2004 - 13:00:12 CDT)
- AMBER: parametrization problem Carsten Detering (Fri Jul 23 2004 - 13:16:13 CDT)
- RE: AMBER: parametrization problem Ross Walker (Fri Jul 23 2004 - 14:32:15 CDT)
- Re: AMBER: parametrization problem Carsten Detering (Fri Jul 23 2004 - 15:38:59 CDT)
- AMBER: about RDF calculation in action.c Grace Li (Fri Jul 23 2004 - 15:39:07 CDT)
- Re: AMBER: parametrization problem Carsten Detering (Fri Jul 23 2004 - 15:33:01 CDT)
- AMBER: atoms not in residue templates anshul_at_imtech.res.in (Sat Jul 24 2004 - 10:19:42 CDT)
- AMBER: erroe in installing amber8 anshul_at_imtech.res.in (Sat Jul 24 2004 - 12:11:02 CDT)
- Re: AMBER: erroe in installing amber8 David A. Case (Sat Jul 24 2004 - 03:40:06 CDT)
- RE: AMBER: atoms not in residue templates Ross Walker (Sat Jul 24 2004 - 10:05:36 CDT)
- Re: AMBER: erroe in installing amber8 Scott Brozell (Sun Jul 25 2004 - 19:58:58 CDT)
- AMBER: about the parameter of the cystein pair in MD simulation Yuhui Cheng (Sun Jul 25 2004 - 21:01:13 CDT)
- Re: AMBER: about the parameter of the cystein pair in MD simulation Thomas E. Cheatham, III (Sun Jul 25 2004 - 22:07:44 CDT)
- AMBER: about running ptraj in amber8 jz7_at_duke.edu (Mon Jul 26 2004 - 09:04:33 CDT)
- RE: AMBER: RESP vs. AM1-BCC charges for isoprene ajakalian_at_lav.Boehringer-Ingelheim.com (Mon Jul 26 2004 - 10:09:31 CDT)
- Re: AMBER: Xleap crash, problem with residue bonding opitz_at_che.udel.edu (Mon Jul 26 2004 - 10:39:51 CDT)
- RE: AMBER: about running ptraj in amber8 Ross Walker (Mon Jul 26 2004 - 11:22:36 CDT)
- RE: AMBER: about running ptraj in amber8 jz7_at_duke.edu (Mon Jul 26 2004 - 11:30:42 CDT)
- AMBER: amber compilation Livadaru, Lucian (Mon Jul 26 2004 - 15:15:50 CDT)
- AMBER: about running ptraj in ambber8 (re-post) jz7_at_duke.edu (Mon Jul 26 2004 - 15:47:52 CDT)
- Re: AMBER: amber compilation Viktor Hornak (Mon Jul 26 2004 - 15:47:33 CDT)
- AMBER: Temperature Regulation Johnson Agbo (Mon Jul 26 2004 - 23:40:44 CDT)
- AMBER: mm_pbsa Abmer8 example John (Tue Jul 27 2004 - 05:38:50 CDT)
- Re: AMBER: Temperature Regulation Andreas Svrcek-Seiler (Tue Jul 27 2004 - 09:09:51 CDT)
- Re: AMBER: Temperature Regulation David A. Case (Tue Jul 27 2004 - 10:24:31 CDT)
- AMBER: question on simulated annealing Venkata S Koppuravuri (Tue Jul 27 2004 - 13:21:52 CDT)
- AMBER: Question on Clustering Analysis Chen, Ya (Tue Jul 27 2004 - 13:26:30 CDT)
- Re: AMBER: question on simulated annealing Carlos Simmerling (Tue Jul 27 2004 - 13:28:27 CDT)
- Re: AMBER: question on simulated annealing David A. Case (Tue Jul 27 2004 - 14:26:06 CDT)
- AMBER: using ptraj Carsten Detering (Tue Jul 27 2004 - 16:10:02 CDT)
- AMBER: about correlation calculation in ptraj jz7_at_duke.edu (Tue Jul 27 2004 - 16:20:53 CDT)
- AMBER: animation? S. Frank Yan (Wed Jul 28 2004 - 01:29:51 CDT)
- AMBER: PB bomb in pb_saarc steven.j.enoch_at_gsk.com (Wed Jul 28 2004 - 03:26:38 CDT)
- Re: AMBER: PB bomb in pb_saarc steven.j.enoch_at_gsk.com (Wed Jul 28 2004 - 03:49:20 CDT)
- AMBER: simulated annealing Abd Ghani Bin Abd Aziz (Wed Jul 28 2004 - 07:08:48 CDT)
- Re: AMBER: simulated annealing Carlos Simmerling (Wed Jul 28 2004 - 07:17:55 CDT)
- Re: AMBER: animation? Guanglei Cui (Wed Jul 28 2004 - 08:20:12 CDT)
- Re: AMBER: animation? aldo jongejan (Wed Jul 28 2004 - 07:36:21 CDT)
- Re: AMBER: simulated annealing Abd Ghani Bin Abd Aziz (Wed Jul 28 2004 - 08:22:37 CDT)
- AMBER: simulated annealing.. Abd Ghani Bin Abd Aziz (Wed Jul 28 2004 - 08:45:55 CDT)
- Re: AMBER: simulated annealing.. Carlos Simmerling (Wed Jul 28 2004 - 09:06:01 CDT)
- AMBER: tleap: automatically identify and connect disulfide bonds? Raik Grünberg (Wed Jul 28 2004 - 12:27:31 CDT)
- Re: AMBER: tleap: automatically identify and connect disulfide bonds? Scott Brozell (Wed Jul 28 2004 - 15:22:52 CDT)
- AMBER: Re: AMBER: Temperature Regulation Dawsonzhu_at_aol.com (Wed Jul 28 2004 - 19:44:56 CDT)
- AMBER: NSPSOL in parm file Sichun Yang (Wed Jul 28 2004 - 23:14:01 CDT)
- Re: AMBER: NSPSOL in parm file David A. Case (Thu Jul 29 2004 - 10:07:54 CDT)
- AMBER: ptraj: load crd without hydrogen (i.e. missing parm file) Raik Grünberg (Thu Jul 29 2004 - 05:34:44 CDT)
- AMBER: umbrella sampling tang kwa (Thu Jul 29 2004 - 12:25:00 CDT)
- Re: AMBER: umbrella sampling David A. Case (Thu Jul 29 2004 - 13:19:13 CDT)
- Re: AMBER: tleap: automatically identify and connect disulfide bonds? Austin B. Yongye (Thu Jul 29 2004 - 08:13:46 CDT)
- AMBER: Re: constant pH calculation in Amber8 John Mongan (Thu Jul 29 2004 - 16:40:36 CDT)
- Re: AMBER: using ptraj Scott (Thu Jul 29 2004 - 16:15:17 CDT)
- Re: AMBER: using ptraj Carsten Detering (Thu Jul 29 2004 - 17:11:11 CDT)
- Re: AMBER: using ptraj Scott (Thu Jul 29 2004 - 17:48:19 CDT)
- AMBER: csong_at_mail.sdu.edu.cn (Fri Jul 30 2004 - 04:08:40 CDT)
- Re: AMBER: Guanglei Cui (Fri Jul 30 2004 - 08:39:51 CDT)
- Re: AMBER: David A. Case (Fri Jul 30 2004 - 10:06:56 CDT)
- AMBER: (no subject) HL Eastwood (Fri Jul 30 2004 - 10:47:18 CDT)
- RE: AMBER: Ross Walker (Fri Jul 30 2004 - 10:46:52 CDT)
- AMBER: WHAM program tang kwa (Fri Jul 30 2004 - 11:09:02 CDT)
- RE: AMBER: (no subject) Ross Walker (Fri Jul 30 2004 - 11:21:33 CDT)
- Re: AMBER: WHAM program David A. Case (Fri Jul 30 2004 - 12:16:02 CDT)
- AMBER: AMBER 6 compilation problems! Grace Li (Fri Jul 30 2004 - 12:17:39 CDT)
- Re: AMBER: AMBER 6 compilation problems! Carlos Simmerling (Fri Jul 30 2004 - 12:26:59 CDT)
- RE: AMBER: AMBER 6 compilation problems! Ross Walker (Fri Jul 30 2004 - 12:30:54 CDT)
- RE: AMBER: (no subject) HL Eastwood (Fri Jul 30 2004 - 13:12:34 CDT)
- RE: AMBER: AMBER 6 compilation problems! Grace Li (Fri Jul 30 2004 - 13:52:15 CDT)
- Re: AMBER: AMBER 6 compilation problems! Carlos Simmerling (Fri Jul 30 2004 - 14:03:31 CDT)
- AMBER: Imaging problem Steve Seibold (Fri Jul 30 2004 - 14:05:12 CDT)
- AMBER: lib file anita Pachaimuthu (Fri Jul 30 2004 - 15:09:19 CDT)
- Re: AMBER: (no subject) David A. Case (Fri Jul 30 2004 - 15:42:15 CDT)
- Re: AMBER: AMBER 6 compilation problems! Grace Li (Fri Jul 30 2004 - 15:42:03 CDT)
- Re: AMBER: Imaging problem Thomas E. Cheatham, III (Fri Jul 30 2004 - 15:41:45 CDT)
- Re: AMBER: lib file David A. Case (Fri Jul 30 2004 - 15:48:50 CDT)
- Re: AMBER: lib file anita Pachaimuthu (Fri Jul 30 2004 - 16:08:18 CDT)
- RE: AMBER: (no subject) Ross Walker (Fri Jul 30 2004 - 16:09:25 CDT)
- Re: AMBER: lib file Furse, Kristina Elisabet (Fri Jul 30 2004 - 16:38:37 CDT)
- Re: Re: AMBER: Chen (Fri Jul 30 2004 - 22:55:14 CDT)
Last message date: Thu May 05 2005 - 14:26:38 CDT
Archived on: Thu May 05 2005 - 14:30:03 CDT
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