AMBER Archive (2004)

Subject: AMBER: amparm

From: Vincent Bisetty (bisettyk_at_dit.ac.za)
Date: Wed Jul 21 2004 - 15:37:39 CDT

Dear Colleagues,
I am working with a small cyclic organic molecule, and used the prep,
link, edit, parm module of AMBER 5.0 to build the molecule. All was fine
until amparm96, the following problem arose:
"PARM-F-UHOSED, try again"
 I viewed the pdb file and the overall cyclic structure seems fine,
except for the NHMe group, which is slightly skewed.

Please let me how to overcome this problem?

kind regards
vincent bisetty

Dr K Bisetty
Senior Lecturer
Department of Chemistry
Steve Biko Campus
Durban Institute of Technology
P O BOX 1334
Durban
4000
Tel : +27-031-2042311
Fax : +27-031-2022671
"ND-4-SPD"
bisettyk_at_dit.ac.za

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