AMBER Archive (2004)

Subject: AMBER: mm_pbsa Abmer8 example

From: John (john.dalmaris_at_imperial.ac.uk)
Date: Tue Jul 27 2004 - 05:38:50 CDT

Hello Amber Users,

 

I am trying to run the Examples for the MM_PBSA in Amber 8. When I run the
Binding example using the input file provided I get the message: "File MS is
not found". Does it mean the Radii file? In Amber7 there is the
atmtypenumber file with the radius data. I used the atmtypenumber file but
still the same message. I have also tried the Stability example getting the
same result. Any idea where I can get this file from?

 

Thank you in advance for any suggestion.

 

Best wishes,

 

John

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