AMBER Archive (2007)

Subject: Re: AMBER: hi

From: Anju Sharma (anju.020384_at_gmail.com)
Date: Tue Feb 13 2007 - 22:44:45 CST

Hello Steven Sir,

as directed by you i set the path of AMBERHOME. What i did is as follows:

>echo $AMBERHOME
----------nothing appears----------
>export AMBERHOME = /usr/local/amber8
>echo $AMBERHOME
/usr/local/amber8
>cd exe
>ls
nucgen exe appears in list........
>$AMBERHOME/exe/nucgen -O -i nuc.in -o nuc.out -d
$AMBERHOME/dat/leap/parm/nucgen.dat -p nuc.pdb

/usr/local/amber8/exe/nucgen: error while lloading shared libraries:
libsvml.so :cannot open shared object file: no such file or directory.

this is wht i got ...so wht should i do nw.

sorry for bothering u agn....

Anju

On 2/13/07, Steven Winfield <saw44_at_cam.ac.uk> wrote:
>
> Hi,
>
> Try typing:
>
> echo $AMBERHOME
>
> and if nothing is printed then you need to set the AMBERHOME environment
> variable using (in the bash shell)
>
> export AMBERHOME=/path/to/your/amber/installation
>
> (obviously with your AMBER directory after the = sign)
>
> Then try running the command again. If you use bash as your shell it
> might be worth adding that line to your .bashrc file (again, if using
> bash) or similar.
>
> Regards,
>
> Steve.
>
>

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