AMBER Archive (2006)

Subject: Re: AMBER: Installation amber 9 on IBM SP4

From: Scott Brozell (sbrozell_at_scripps.edu)
Date: Thu Aug 24 2006 - 21:58:20 CDT

Hi,

This is a syntax error according to K&R ansi edition.
I'll post a bug fix.

Scott

On Thu, 24 Aug 2006, Scott Brozell wrote:

> Hi,
>
> On Thu, 24 Aug 2006, Myunggi Yi wrote:
>
> > Thank you.
> >
> > Now I've got the following error message
> >
> > cd ptraj; make install
> > xlc -c -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -O2
> > -DCLINK_PLAIN -o main.o main.c
> > "actions.h", line 209.21: 1506-275 (S) Unexpected text ',' encountered.
> > make: 1254-004 The error code from the last command is 1.
> >
>
> 206 typedef enum _transformContactsType {
> 207 CONTACTS_NULL = 0,
> 208 CONTACTS_FIRST,
> 209 CONTACTS_REFERENCE,
> 210 } transformContactsType;
>
> Remove the comma from line 209 of src/ptraj/actions.h.
> This looks like it will become a bugfix.
> I'll check the C standard first.
>
> Scott
>
> > On 8/24/06, Ross Walker <ross_at_rosswalker.co.uk> wrote:
> > > Dear Myunggi
> > >
> > > > I don't have vtanh.
> > > >
> > > > Would you send me the patch?
> > >
> > > The following patch should solve it.
> > >
> > > Copy it to $AMBERHOME/src/sander
> > >
> > > Then do:
> > >
> > > patch -p0 <no_vtanh.patch
> > >
> > > Then recompile.
> > >
> > > All the best
> > > Ross
> > >
> > > /\
> > > \/
> > > |\oss Walker
> > >
> > > | HPC Consultant and Staff Scientist |
> > > | San Diego Supercomputer Center |
> > > | Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
> > > | http://www.rosswalker.co.uk | PGP Key available on request |
> > >
> > > Note: Electronic Mail is not secure, has no guarantee of delivery, may not
> > > be read every day, and should not be used for urgent or sensitive issues.
> > >
> > >
> > >
> >
> >
> > --
> > Best wishes,
> >
> > MYUNGGI YI
> > ==================================
> > KLB 419
> > Institute of Molecular Biophysics
> > Florida State University
> > Tallahassee, FL 32306
> >
> > Office: (850) 645-1334
> > http://www.scs.fsu.edu/~myunggi
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