AMBER Archive (2005)

Subject: AMBER: Amber8 installation on IBM (power4) with SUSE 9.1 Linux (IBM XLF compiler)

From: Soo Joo (protege_at_snu.ac.kr)
Date: Tue Apr 19 2005 - 04:36:26 CDT

Hi,

I am trying to install amber8 on IBM machine (CPU power4) running SUSE_9.1 Linux. The fortran compiler is
IBM XLF compiler. MPICH is installed.

After setting environment variables, I gave following configure command at $AMBERHOME/src

./configure xlf90_suse ( I changed suse8.1 to suse9.1 in configure file. )

And the message says "ONLY HAVE MPICH for parallel" with no "config.h" file generated.

What does this mean ? Does it means compilation with serial mode is not allowed ? If so, can I skip directly to parallel installation without serial installation ? If not, how can I make serial compilation before proceeding to parallel compile ?

So, now I gave following command to compile in parallel mode anyway.

./configure -mpich xlf90_suse

This time, the "config.h" file is generated
Now if I try to compile in parallel, I have follow error message.

amber8/src> make parallel
Starting installation of Amber8 (parallel) at Tue Apr 19 17:40:00 KST 2005.
mkdir ../exe
mkdir: cannot create directory `../exe': File exists
make: [parallel] Error 1 (ignored)
cd sander; make parallel
make[1]: Entering directory `/home/kwanak1/amber8/src/sander'
/usr/bin/cpp -I/install/post/node_env/mpich/mpichgm-1.2.6..14a/gm/ppc64/smp/ibm
all/post/node_env/mpich/mpichgm-1.2.6..14a/gm/ppc64/smp/ibmcmp64/ssh/include -P
c/include -DMPI -DCLINK_PLAIN -Drs6000 trace.f > _trace.f
In file included from trace.f:4:
dprec.h:1:38: missing terminating ' character
dprec.h:40:39: missing terminating ' character
dprec.h:52:25: warning: multi-line string literals are deprecated
trace.f:72:28: warning: multi-line string literals are deprecated
In file included from trace.f:503:
parallel.h:1:38: missing terminating ' character
parallel.h:7:42: missing terminating ' character
make[1]: *** [trace.o] Error 1
make[1]: Leaving directory `/home/kwanak1/amber8/src/sander'
make: *** [parallel] Error 2
amber8/src>

Any comment will be appreciated.

Soo J

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