AMBER Archive (2005)

Subject: RE: AMBER: Can someone recommend a tutorial?

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Thu Jan 20 2005 - 14:37:22 CST

Dear Kara,

This tutorial should give you an idea of what to do.
http://www.rosswalker.co.uk/tutorials/amber_workshop/Tutorial_four/index.htm

All the best
Ross

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> -----Original Message-----
> From: owner-amber_at_scripps.edu
> [mailto:owner-amber_at_scripps.edu] On Behalf Of Kara Wald
> Sent: 20 January 2005 12:29
> To: amber_at_scripps.edu
> Subject: AMBER: Can someone recommend a tutorial?
>
> I need to create input files for a piece of DNA covalently
> bound to two
> minor groove binding agents. I know that in an older version
> of Amber,
> this was done using LINK. How does one do this in Amber 8?
> Is there
> a tutorial out there that covers linking residues in LeAP?
>
> Thanks,
>
> Kara Di Giorgio
> University of the Pacific
>
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