AMBER Archive (2005)

Subject: AMBER: Can someone recommend a tutorial?

From: Kara Wald (kdigiorgio_at_sbcglobal.net)
Date: Thu Jan 20 2005 - 14:28:46 CST

I need to create input files for a piece of DNA covalently bound to two
minor groove binding agents. I know that in an older version of Amber,
this was done using LINK. How does one do this in Amber 8? Is there
a tutorial out there that covers linking residues in LeAP?

Thanks,

Kara Di Giorgio
University of the Pacific

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