AMBER Archive (2003)

Subject: Re: ambpdb

From: Florian Barth (bio_hazard_at_gmx.de)
Date: Wed Apr 16 2003 - 06:59:42 CDT

Hi,

I had similar problems when I compiled ambpdb with the "-march=athlon"
flag to gcc/g77 3.x. Without this flag ambpdb worked fine.

Regards

       Florian Barth
       

YP> Hi, Dear AMBER users:
YP> I want to convert restrt file to pdb file. After I typed the command, I
YP> got the following error message. I checked the prmtop and restrt files.
YP> Both are normal files. Could you tell me what is wrong and how to avoid
YP> it? Thanks.

YP> $ ambpdb -p dor1.prmtop
YP> | New format PARM file being parsed.
YP> | Version = 1.000 Date = 04/14/03 Time = 21:34:45
YP> dor1md2.restrt
YP> md2.pdb
YP> fmt: read unexpected character
YP> apparent state: internal I/O
YP> last format: (i6)
YP> lately reading sequential formatted internal IO
YP> Aborted

YP> Youyi Peng

____________________________________

Florian Barth
Institute of Technical Biochemistry
University of Stuttgart
Allmandring 31
70569 Stuttgart
Germany
phone: +49-711-6853811
fax: +49-711-6853196
mailto:bio_hazard_at_gmx.de
http://www.itb.uni-stuttgart.de