AMBER Archive (2000) - May 2000 By Thread

Starting: Mon May 01 2000 - 11:17:11 CDT
Ending: Wed May 31 2000 - 21:27:34 CDT

• Side chain mobility Aleksandras Gutmanas (Thu May 04 2000 - 10:28:13 CDT)
• Re: Sander: crash if nmropt=1. HELP!!!!!!! David Konerding (Tue May 23 2000 - 12:33:20 CDT)
• anions of NAB's Dayle Smith (Mon May 01 2000 - 11:17:11 CDT)
• Baic MD simulation Victor Pham (Tue May 02 2000 - 18:02:44 CDT)
• transition metal ions parameters Francesca Mocci (Thu May 04 2000 - 09:46:45 CDT)
• H+ parameters Pascal Bonnet (Thu May 04 2000 - 20:56:21 CDT)
• pressureS Victor Pham (Fri May 05 2000 - 12:57:24 CDT)
• problems in sander devi rvel (Sun May 07 2000 - 02:53:52 CDT)
  • Re: problems in sander Yong Duan (Sun May 07 2000 - 15:11:36 CDT)
• Re: problems in sander Bill Ross (Sun May 07 2000 - 03:54:57 CDT)
• (no subject) Michal Otyepka (Mon May 08 2000 - 04:02:31 CDT)
• babel François Yves Dupradeau (Mon May 08 2000 - 06:06:51 CDT)
• Density value in sander output mariang98 (Mon May 08 2000 - 16:57:37 CDT)
• protonated adenine and cytosine? Alan Cheng (Mon May 08 2000 - 22:09:40 CDT)
• regarding edit option Prem Raj Joseph (Tue May 09 2000 - 11:19:30 CDT)
• 6-12 nonbonded function Karl N. Kirschner (Tue May 09 2000 - 13:17:45 CDT)
• AMBER 6 and residual dipolar coupling Fabio Arnesano (Wed May 10 2000 - 03:36:25 CDT)
  • Re: AMBER 6 and residual dipolar coupling Vickie Tsui (Wed May 10 2000 - 12:04:11 CDT)
• carnal script Peter Gannett (Wed May 10 2000 - 08:37:37 CDT)
• Looking for a PREP input file Jose Ramon Blas (Thu May 11 2000 - 12:33:28 CDT)
• Re: a6 sander gb breaks on smallmol Jarrod Smith (Thu May 11 2000 - 17:42:03 CDT)
• pdb files Victor Pham (Thu May 11 2000 - 19:09:11 CDT)
• d-uridine Friedrich A. Gollmick (Fri May 12 2000 - 05:17:41 CDT)
• TAUP Surjit Dixit (Fri May 12 2000 - 14:18:35 CDT)
• question about imaging rathinavelan thenmalarchelvi (Sat May 13 2000 - 14:45:30 CDT)
• Amber6 documentation jim caldwell (Tue May 16 2000 - 13:37:49 CDT)
• question on expanding nphb Margaret Cheung (Tue May 16 2000 - 20:27:31 CDT)
• Hello Mao Xiang (Wed May 17 2000 - 03:13:42 CDT)
  • Re: Hello David Case (Wed May 17 2000 - 09:43:47 CDT)
• [pavan@bnpi.com: 'Coordinate resetting in amber6'] David Case (Wed May 17 2000 - 17:08:18 CDT)
• Re: [pavan@bnpi.com: 'Coordinate resetting in amber6'] Michael Crowley (Wed May 17 2000 - 18:08:26 CDT)
• equilibration of CH2Cl2 box Jesús Gómez (Thu May 18 2000 - 07:30:32 CDT)
• gibbs in sodium Mao Xiang (Thu May 18 2000 - 21:06:48 CDT)
• AMBER installation kian kani (Fri May 19 2000 - 12:27:37 CDT)
• amber parameters Mao Xiang (Fri May 19 2000 - 23:07:56 CDT)
• 3-botton emulat Yunfeng Hu (Mon May 22 2000 - 15:10:23 CDT)
• Compile Problem ptraj with PGI compiler Kouji Hauyama (Mon May 22 2000 - 21:45:10 CDT)
• sander compile error with MPICH compiled by PGI compiler Kouji Hauyama (Tue May 23 2000 - 07:34:15 CDT)
• Restraint and topology mismatch error Rebecca Perlow (Tue May 23 2000 - 13:58:07 CDT)
• Crosslink in Leap Jeffrey P. Jones (Tue May 23 2000 - 14:15:06 CDT)
• Re: Crosslink in Leap Bill Ross (Wed May 24 2000 - 00:28:37 CDT)
• Re: DOUBT IN PTRAJ DOCUMENTATION A.Madhumalar (Wed May 24 2000 - 02:05:12 CDT)
• Re: DOUBT IN AMBER5 PTRAJ DOCUMENTATION (fwd) A.Madhumalar (Wed May 24 2000 - 05:53:32 CDT)
• Re: Help with polynucleotide building David Case (Wed May 24 2000 - 17:53:24 CDT)
• dummy atom as anchor in gibbs ? Terreux Raphael (Thu May 25 2000 - 16:53:43 CDT)
• soft repulsion option Cristina Dezi (Fri May 26 2000 - 03:15:01 CDT)
• 4096wat running problem Kouji Hauyama (Fri May 26 2000 - 09:09:42 CDT)
  • Re: 4096wat running problem David Konerding (Fri May 26 2000 - 10:02:18 CDT)
    • Re: 4096wat running problem Kouji Hayama (Fri May 26 2000 - 10:36:50 CDT)
    • Re: 4096wat running problem Michael Crowley (Fri May 26 2000 - 11:22:10 CDT)
• Periodic boundary condition Prem Raj Joseph (Fri May 26 2000 - 11:36:41 CDT)
• Re: Periodic boundary condition jim caldwell (Fri May 26 2000 - 12:28:50 CDT)
• Simulation of DNA Marcela Madrid (Fri May 26 2000 - 12:58:19 CDT)
• 4096wat runnning problem Kouji Hauyama (Sat May 27 2000 - 07:41:24 CDT)
• center of mass with gibbs ? Terreux Raphael (Mon May 29 2000 - 17:46:12 CDT)
• AMBER 6.0 on parallel IBM SP system. Gerard GIL (Tue May 30 2000 - 09:09:07 CDT)
  • Shake and a new computer system R. M. Fesinmeyer (Tue May 30 2000 - 12:50:25 CDT)
• improvements to force field Marcela Madrid (Tue May 30 2000 - 15:02:35 CDT)
• What does this mean? Renxiao Wang (Tue May 30 2000 - 18:46:03 CDT)
  • ROAR-CP calculation on axp machines HIRAO (Tue May 30 2000 - 21:23:02 CDT)
• energy decomposition along MD trajectory Michal Otyepka (Wed May 31 2000 - 07:59:36 CDT)
• md toolchest Cui Guanglei (Wed May 31 2000 - 12:16:32 CDT)
• inquire about the cost of the license. Margaret Cheung (Wed May 31 2000 - 12:54:13 CDT)
• rms in rdparm Frank Yan (Wed May 31 2000 - 17:38:51 CDT)
• Visualization Garrett W Grahek (Wed May 31 2000 - 18:50:57 CDT)
• RESP Pascal Bonnet (Wed May 31 2000 - 21:27:34 CDT)

Last message date: Sat Dec 30 2000 - 23:44:00 CST
Archived on: Thu May 05 2005 - 14:17:08 CDT