AMBER Archive (2000)

Subject: d-uridine

From: Friedrich A. Gollmick (fago_at_molebio.uni-jena.de)
Date: Fri May 12 2000 - 05:17:41 CDT


Dear Amber users,

I have a DNA molecule with an incorporated deoxy-uridine and for
compatibility reasons I use the old "link, edit, parm procedure" and the
parm91 force field.

But the database does'nt contain this residue.

So my Qustion is wether anybody has a database for deoxy-uridine or may be
an other proposal to solve the problem.

Thanks for any help

Friedrich

-- 
Dr. Friedrich A. Gollmick                 fago_at_hodler.molebio.uni-jena.de 
Friedrich-Schiller-Universitaet Jena      
Biologisch-Pharmazeutische Fakultaet      Tel.: +49-3641-65-7563/7564
Institut fuer Molekularbiologie           Fax : +49-3641-657520

Winzerlaer Strasse 10, D-07745 Jena, Germany

Postfach 100 813 D-07708 Jena, Germany