Mutiple Sequence Alignment of Sarcoplasmic Calcium-Binding Proteins

EF-Hand CaBP Data
Library Sequence Information

Multiple Sequence Alignment of Sarcoplasmic Calcium-Binding Proteins

This alignment was generated with CLUSTALW. Please read about how it was constructed to determine if it suit your needs.



CLUSTAL W (1.74) multiple sequence alignment


SCP_NERDI       --SDLWVQKMKTYFNRI-DFDKDGAITRMDFESMAERFAKE--S-EMKAEHAKVLMDSLT
SCP_PERVT       --SDLWVQKMKTYFNRI-DFDKDGAITRKDFESMATRFAKE--S-EMKPEHAKVLMDSLT
SCP1_BRALA      GLNDFQKQKIKFTFDFFLDYNKDGSIQWEDFEEMIKRYKEV-NKGSLSDADYKSMQASLE
SCP2_BRALA      GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEV-NKGSLSDADYKSMQASLE
SCP1_PONLE      --AYSWDNRVKYVVRYMYDIDNNGFLDKNDFECLALRNTLIEGRGEFNEAAYANNQKIMS
SCPB_PENSP      --AYSWDNRVKYIVRYMYDIDNDGFLDKNDFECLAVRVTLIEGRGEFSPEGYAKNKEIMA
SCPA_PENSP      --AYSWDNRVKYVVRYMYDIDDDGFLDKNDFECLAVRNTLIEGRGEFSAADYANNQKIMR
SCP_PATYE       --TDYLVSKWKIWYKSL-DVNHDGIISIENVEESRNKFTDL--H-KLVGDKSTGVKVDMQ
                       .: *     : * :.:* :   :.*    :        .:           : 

SCP_NERDI       GVWDNF--LTAVAGGKGIDETTFINSMKEMVKN----PEAKSVVEGPLPLFFRAVDTNED
SCP_PERVT       GVWDKF--LANVAGGKGIDQATFISSMKEKVKD----PNAKAVVEGPLPLFFRAVDTNED
SCP1_BRALA      DEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGD
SCP2_BRALA      DEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGD
SCP1_PONLE      NLWNEIAELADFNKDGEVTIDEFKKAVQNVCVG-KAFATFPAAFKVFIANQFKTVDVNGD
SCPB_PENSP      NLWNEIAELADFNKDGEVTVDEFKQAVQKNCKG-KAFANFPNAFKVFIGNQFKTIDVDGD
SCPA_PENSP      NLWNEIAELADFNKDGEVTVDEFKMAVQKHCQG-KKYSEFPGAFKVFIANQFKAIDVNGD
SCP_PATYE       KWWDTY---IFLTPGAEISETQFVENLGNSFKK---DKAFLATMTACFNMIFDVIDTDKD
                  *        .  .  :    :     :                  :   *  :*.. *

SCP_NERDI       NNISRDEYGIFFGMLGL-----DKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMNDGD
SCP_PERVT       NMISRDEYGIFFNMLGL-----NPDMAPASFDAIDTNNDGLLSQEEFVTAGSDFFINDQD
SCP1_BRALA      GIVDLEEFQNYCKNFQL-----QCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAA
SCP2_BRALA      GIVDLEEFQNYCKNFQL-----QCADVPAVYNVITDGGKVTFDLNRYKELYYRLLTSPAA
SCP1_PONLE      GLVGVDEYRLDCISRSAFANIKEIDDAYNKLATDADKKAGGISLARYQELYAQFISNPDE
SCPB_PENSP      GMVGVDEYRLDCITRSAFADVKEIDDAYDKLCTEEDKKAGGINLARYQELYAQFISNEDE
SCPA_PENSP      GKVGLDEYRLDCITRSAFAEVKEIDDAYDKLTTEDDRKAGGLTLERYQDLYAQFISNPNE
SCP_PATYE       RSIDLNEFIYAFAAFGH----ENESVVRTAFALLKPDDDNTVPLRTVVDAWISFVTCEDA
                  :. :*:              :   .              .           :.     

SCP_NERDI       STNKVFWGPLV----
SCP_PERVT       SPNKVFWGPLV----
SCP1_BRALA      DAGNTLMGQKP----
SCP2_BRALA      DAGNTLMGQKP----
SCP1_PONLE      SANAVYLFGPLKEVQ
SCPB_PENSP      KNNACYLFGPLKEVQ
SCPA_PENSP      SCSACFLFGPLKVVQ
SCP_PATYE       SKTDVIKSAFES---
                .

Key: * = perfect match; : = high similarity; . = low similarity

Protein codes: SCP = sarcoplasmic CaBP, isoform I; SCP2 = sarcoplasmic CaBa, shrimp alpha chainP; SCPB =