CaBP Data Library General Information

Calcium Dependent Protein Kinase

Primary information about calcium-dependent protein kinase:
Basic chemical and physical information
Basic biological information
Basic genomic information
Metal ion binding constants
Interspecies sequence alignment
Information on function
Summary of structural studies
Information on the conformational change List of available structures Information about mutations
References about calcium-dependent protein kinase Other web resources about calcium-dependent protein kinase
Additional information about calcium-dependent protein kinase:
Information about the evolutionary relationship of calcium-dependent protein kinase to other proteins






Basic Information

Additional names and abbreviations: calcium-dependent protein kinase: calmodulin-domain protein kinase
Isoforms: isoform 1
isoform 11
isoform 3
Yeast Protein Database Entries: No links to the YPD are stored in the database


Basic Chemical and Physical Information:
Number of amino acids: isoform 1: 508 (Glycine max) - 610 (Arabidopsis thaliana)
isoform 11: 542 (all species)
isoform 3: 513 (Zea mays) - 533 (Oryza sativa)
View a list of all sources stored in the database
Molecular weight: isoform 1: 57.169 kD (Glycine max) - 68.253 kD (Arabidopsis thaliana)
isoform 11: 61.166 kD (all species)
isoform 3: 58.081 kD (Zea mays) - 59.522 kD (Oryza sativa)
View a list of all sources stored in the database
pI: not yet available in the data library
Number of functional calcium binding sites: not yet available in the data library
Macroscopic calcium binding constants: not yet available in the data library
Other metal binding constants: not yet available in the data library
Protein stability: not yet available in the data library
Post-translational modifications: not yet available in the data library


Basic Biological Information:
Source organisms: isoform 1: Arabidopsis thaliana, Daucus carota, Oryza sativa, Glycine max
isoform 11: Oryza sativa
isoform 3: Zea mays, Oryza sativa
View an annotated list of all sources stored in the database
Tissues: not yet available in the data library
Subcellular localization: not yet available in the data library
Regulation: not yet available in the data library


Genomic Information:
GenBank entries: not yet available in the data library
Gene length: not yet available in the data library
Gene structure: not yet available in the data library
Promoter: not yet available in the data library
Gene copies: not yet available in the data library
Alleles: no alleles are currently stored in the data library
Chromosomal localization: not yet available in the data library

Interspecies Sequence Alignment



                         |-helixI-|--loop1----|helixII|
                          En**nn**nX*Y*ZG#Ix**zn**nn*n

ARABID  :    ...AESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKES
SOY     :    ...AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMES


         |helixIII|--loop2----|helixIV|      |-helixV-|-loop3-----|helixVI|
          En**nn**nX*Y*ZG#Ix**zn**nn*n        En**nn**nX*Y*ZG#Ix**zn**nn*n

ARABID  : EILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEE
SOY     : EIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKD


             |helixVII|--loop4----|helixVIII|
              En**nn**nX*Y*ZG#Ix**zn**nn*n

ARABID  : FGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSITGGPVKMGLEKSFSIALKL
SOY     : FGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFK


Sequence alignment for the entire calmodulin subfamily

Functional Information:

General information:

Biological roles:

Disease states:

Target molecules:


Structural Information:

Calcium-coordination:
not yet available in the data library


Nature of the conformational changes:
not yet available in the data library


Secondary structure:
(as reported in the PDB file and its accompanying reference)
not yet available in the data library


Additional structural information:
no additional structural information is currently stored in the database


Available structures:
(follow the links from the PDB code to the retrieve the
PDB files)
no structures are currently stored in the database

Information about mutants: