Rosetta Membrane Workshop

Preparing for the Workshop

UNIX Operating Systems

Workshop participants are expected to be familiar with UNIX-like operating systems. Before the workshop, please review the following resources:

Linux Command: Learning the Shell
University of Surrey Unix Terminal Tutorials:
Contains workable examples. Highly recommended
Tutorial Introduction to UNIX Commands:
From the Center for Structural Biology at Vanderbilt
Linux competence Self-Test

Scripting Languages

Rosetta users often prepare input files and analyze Rosetta output models using scripts written in Python or Perl. We recommend familiarizing yourself with Python:

Python Tutorial

Molecular Visualization Tools

You will also need a tool to visualize biomolecular structures. We will be using PyMOL, but you can use any of the tools below:

Rosetta Resources

You can learn more about Rosetta using these resources:

Rosetta User Guide

The tutorials are based on on this paper:

Kaufmann, K. W., Lemmon, G. H., Deluca, S. L., Sheehan, J. H., & Meiler, J. (2010). Practically useful: what the Rosetta protein modeling suite can do for you. Biochemistry, 49(14), 2987-2998.
Paper Supplement

The materials for the 2014 Rosetta Membrane Workshop can be found here (730 MB zip file) here

The BSDF conference is supported by:
National Institute of General Medical Sciences (grant R01GM073151)
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