AMBER Archive (2009)

Subject: Re: [AMBER] about file format

From: Jia Xu (xujia.ruc_at_gmail.com)
Date: Sun Aug 30 2009 - 00:32:30 CDT

Thank you!

On Sat, Aug 29, 2009 at 10:50 PM, Tom Joseph <ttjoseph_at_gmail.com> wrote:

> http://ambermd.org/formats.html
>
> --Tom
>
> 2009/8/29 Jia Xu <xujia.ruc_at_gmail.com>:
> > Dear amber users,
> >
> > I read the tutorial (http://ambermd.org/antechamber/pro4.html) to learn
> how
> > to generate the topology file for non-standard residues. However, I am
> > confused about the file format of prep file (
> > http://ambermd.org/antechamber/pro4.prepi) and topology file (
> > http://ambermd.org/antechamber/ala-pr4-ala.prmtop).
> >
> > Could anyone tell me where can I find a description of the file format
> used
> > by amber?
> >
> > Thanks in advance!
> >
> >
> > --
> > Jia Xu
> > _______________________________________________
> > AMBER mailing list
> > AMBER_at_ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
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