AMBER Archive (2009)

Subject: Re: [AMBER] Compiling amber 9 with openMPI

From: Myunggi Yi (myunggi_at_gmail.com)
Date: Tue Jun 23 2009 - 13:11:46 CDT

Thank you.

On Tue, Jun 23, 2009 at 10:13 AM, case <case_at_biomaps.rutgers.edu> wrote:

> On Tue, Jun 23, 2009, Myunggi Yi wrote:
> >
> > I am not able to compile Amber9 with intel openmpi (with and without
> intel
> > MKL)on linux cluster.
> >
> > ./configure -openmpi -static -bintraj ifort_x86_64
>
> Leave out the "-static" flag. The "duplicate malloc" error messages
> usually come from trying to MPI link statically. I'm not sure this will
> help, but it is certainly worth a try.
>
> ...dac
>
>
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-- 
Best wishes,

Myunggi Yi
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