AMBER Archive (2009)

Subject: Re: [AMBER] Compiling amber 9 with openMPI

From: case (case_at_biomaps.rutgers.edu)
Date: Tue Jun 23 2009 - 09:13:18 CDT

On Tue, Jun 23, 2009, Myunggi Yi wrote:
>
> I am not able to compile Amber9 with intel openmpi (with and without intel
> MKL)on linux cluster.
>
> ./configure -openmpi -static -bintraj ifort_x86_64

Leave out the "-static" flag. The "duplicate malloc" error messages
usually come from trying to MPI link statically. I'm not sure this will
help, but it is certainly worth a try.

...dac

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