AMBER Archive (2009)

Subject: Re: [AMBER] A beginner's question for using AMBER to do cell membrane simulation and molecular transportation

From: Xu Dong (hslinhc_at_gmail.com)
Date: Sat Feb 21 2009 - 15:40:03 CST

Hi Carlos,
Thank you very much for your reply. It is really helping.
I'll figure it out.

Best Regards.
Dong, Xu

2009/2/21 Carlos Simmerling <carlos.simmerling_at_gmail.com>

> it could be done, but such simulations would be considered very
> advanced and only to be taken on once you have extensive experience
> with MD simulations.
> this email list is really for technical questions about the Amber
> software. for help in getting started, you might want to check in with
> one of the several labs at Stony Brook (even 2 in your own department)
> that use Amber on a daily basis- we can help you out.
>
>
> On Sat, Feb 21, 2009 at 3:27 PM, Xu Dong <hslinhc_at_gmail.com> wrote:
> > Dear All,
> > I wonder if AMBER could be used to do the cell membrane simulation, if I
> > want to study how medicine molecular can be transported from one side of
> > membrane to another? If yes, do you have any suggestion on anything I
> should
> > look into first(I'm sorry I'm really very new at AMBER)
> >
> > Thank you very much
> > --
> > Dong Xu
> > Stony Brook AMS
> > _______________________________________________
> > AMBER mailing list
> > AMBER_at_ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
> _______________________________________________
> AMBER mailing list
> AMBER_at_ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
> 

-- 
Dong Xu
Stony Brook AMS
_______________________________________________
AMBER mailing list
AMBER_at_ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber