AMBER Archive (2009)

Subject: Re: [AMBER] A beginner's question for using AMBER to do cell membrane simulation and molecular transportation

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Sat Feb 21 2009 - 15:33:31 CST

it could be done, but such simulations would be considered very
advanced and only to be taken on once you have extensive experience
with MD simulations.
this email list is really for technical questions about the Amber
software. for help in getting started, you might want to check in with
one of the several labs at Stony Brook (even 2 in your own department)
that use Amber on a daily basis- we can help you out.

On Sat, Feb 21, 2009 at 3:27 PM, Xu Dong <hslinhc_at_gmail.com> wrote:
> Dear All,
> I wonder if AMBER could be used to do the cell membrane simulation, if I
> want to study how medicine molecular can be transported from one side of
> membrane to another? If yes, do you have any suggestion on anything I should
> look into first(I'm sorry I'm really very new at AMBER)
>
> Thank you very much
> --
> Dong Xu
> Stony Brook AMS
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> AMBER_at_ambermd.org
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>

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