AMBER Archive (2008)

Subject: Re: AMBER: xleap (measureGeom)

From: Scott Brozell (sbrozell_at_scripps.edu)
Date: Mon Dec 22 2008 - 16:10:46 CST

Hi,

No; you might be able to hack around this by creating a token atom
at a center of mass...
it's almost certainly easier to try an alternate visualizer,
eg chimera, vmd, etc

Scott

On Sat, 20 Dec 2008, Taufik Al-Sarraj wrote:

> can i use measuregeom function in xleap or tleap to calculate the distance
> between two centers of mass not just atoms.
>
> e.g. measuregeom <center sys.11> <sys.140>
> i tried measuregeom sys.11 sys.140 and that does not work.
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