AMBER Archive (2008)

Subject: AMBER: error in parallel amber 9 test

From: Jaber Jahanbin Sardroodi (
Date: Sat Aug 02 2008 - 16:12:07 CDT

Dear amber developers,
I had the following probleme in parallel test of amber 9 (my system is
Fedora 9, on AMD Phenom quad core processor, openmpi and gfortran):
passed all previous tests ...
cd jar; ./Run.jar
diffing with mdout.jar
diffing with dist_vs_t
cd bintraj; ./Run.bintraj
sander and ptraj: test sander netCDF output and ptraj netCDF input
[localhost.localdomain:19636] MPI_ABORT invoked on rank 0 in communicator
MPI_COMM_WORLD with errorcode 1
 Thank you very much for your kindly helps
Dr Jaber Jahanbin Sardroodi

Department of Chemistry, Faculty of Basic Sciences, Azarbaijan

University of Tarbiat Moallem, Tabriz, Iran

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