AMBER Archive (2008)

Subject: AMBER: solvate dna in TIP3PBOX 10.0

From: Collins Nganou (nganoucollins_at_gmail.com)
Date: Sat Jul 26 2008 - 04:08:26 CDT

Hi Bill

I create it by dna = loadpdb BDNA_15_GC.pdb

Then I add Na+ by

addions dna Na+ 0

But solvateBox dna TIP3PBOX 10.0 didn't run, I didn't know why?

Regards

On Fri, Jul 25, 2008 at 10:28 PM, Bill Ross <ross_at_cgl.ucsf.edu> wrote:

> > > solvateBox dna TIP3PBOX 10.0
> > solvateBox: Argument #1 is type String must be of type: [unit]
>
> 'dna' is argumet #1 - how did you create it?
>
> E.g.
>
> > dna = loadpdb mydna.pdb
>
> Bill
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