AMBER Archive (2008)

Subject: Re: AMBER: Installation problem of AMBER on cluster

From: sudipta sinha (sudipta.mml_at_gmail.com)
Date: Mon May 05 2008 - 04:47:38 CDT

Hi Russel,

            Our processor is Intel(R) Xeon(R). But we have successfully
installed serial version by opteron option. The program is running fine.

           Thanks and regards
             sudipta

On Mon, May 5, 2008 at 12:39 PM, Bertrand P. S. Russell <
betrussell23_at_gmail.com> wrote:

> Is your processor in Opteron?
>
> 2008/5/5 Bertrand P. S. Russell <betrussell23_at_gmail.com>:
>
> Had your serial version installation went fine?
> >
> > 2008/5/5 sudipta sinha <sudipta.mml_at_gmail.com>:
> >
> > Hi Russell,
> > >
> > > Please find the attached amber config.h file herewith and the
> > > glibc version is
> > > glibc-2.3.4-2.39
> > >
> > > Thanks and regards
> > > sudipta
> > >
> > >
> > >
> > > On Mon, May 5, 2008 at 7:20 AM, Bertrand P. S. Russell <
> > > betrussell23_at_gmail.com> wrote:
> > >
> > > > Hi Sudip,
> > > >
> > > > Could you post your amber config.h file? What is your glibc version?
> > > >
> > > > 2008/5/5 David A. Case <case_at_scripps.edu>:
> > > >
> > > > On Sun, May 04, 2008, sudipta sinha wrote:
> > > > > >
> > > > > > I couldn't understand how I compile MPICH2 with the
> > > > > > -fno-second-underscore flag?.
> > > > >
> > > > > This would probably go into the FFLAGS variable you give to the
> > > > > configure
> > > > > command for mpich2. (It might be F90FLAGS: you will have to look
> > > > > at the
> > > > > mpich2 documentation.)
> > > > >
> > > > > Is there any chance that you have a friend who is experienced with
> > > > > computers
> > > > > and knows how to run "nm" and track down naming conflicts like
> > > > > this? This is
> > > > > the sort of problem that is very difficult to debug remotely, but
> > > > > it usually
> > > > > straightforward who has been through this before and who has
> > > > > access to your
> > > > > machine.
> > > > >
> > > > > ...good luck...dac
> > > > >
> > > > >
> > > > > -----------------------------------------------------------------------
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> > > > >
> > > >
> > > >
> > > >
> > > > --
> > > > Life is not about getting somewhere in a hurry, but enjoying the
> > > > journey to the full.
> > > > Bertrand. P. S. Russell
> > > > Nanyang Drive,
> > > > Singapore.
> > > >
> > >
> > >
> >
> >
> > --
> > Life is not about getting somewhere in a hurry, but enjoying the journey
> > to the full.
> > Bertrand. P. S. Russell
> > Nanyang Drive,
> > Singapore.
> >
>
>
>
> --
> Life is not about getting somewhere in a hurry, but enjoying the journey
> to the full.
> Bertrand. P. S. Russell
> Nanyang Drive,
> Singapore.
>

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