AMBER Archive (2008)

Subject: AMBER: Installation error on IBM cluster

From: juyong Lee (
Date: Mon May 05 2008 - 03:40:59 CDT

Dear, developers

I still have a problem in installing amber10 on IBM cluster.
As suggested by Dr. Case, config.h is generated with with -nobintraj and
-nosanderidc options.
Though I succeeded in compiling serial version of amber10, compiling
parallel version caused a problem that I've never seen since I started to
use amber.

I executed ./configure_amber -nobintraj -nosanderidc -mpich xlf90_suse

specification of the system is
OS : Linux node481 2.6.5-7.139-pseries64 #1 SMP Fri Jan 14 15:41:33 UTC 2005
ppc64 ppc64 ppc64 GNU/Linux
fortran compiler : xlf90 ver. 9.1

The error message is presented below:
 EXCEPTION terminates program: no handler for exception.
 Exception of type: UNDIAGNOSED at 100C69A4. Regs:
 10168180 FFFFD040 4004DD00 10286D1C 00000000 00000C1B 00000000 00000013
 10279460 00000000 10291E48 100C40F0 10291E48 1022C734 10220000 00000000
 00000046 00000000 10270000 FFFFD858 10220000 10220000 FFFFD188 00000000
 0000053F 1028114C FFFFD070 10286B78 00000543 102813A0 10220000 10220000
 resume: cr: lr: ctr: xer: fpscr: msr: mq:
 100C69A8 28024842 10168180 100C40F0 20000000 00000000 0200D032 00000000
 Line ? Disp 100C69A4 ExtendedCompareExpr Dsa: FFFFD040
 Line ? Disp 1016817C ScReplaceMATMUL Dsa: FFFFD060
 Line ? Disp 10152FF0 ProcessExpr Dsa: FFFFD210
 Line ? Disp 10152FBC ProcessExpr Dsa: FFFFD360
 Line ? Disp 1015301C ProcessExpr Dsa: FFFFD4B0
 Line ? Disp 10152F90 ProcessExpr Dsa: FFFFD600
 Line ? Disp 10153C78 ScProcessExpr Dsa: FFFFD750
 Line ? Disp 100A61D0 ScProcessStmt Dsa: FFFFD790
 Line ? Disp 10049C34 StmtWalk Dsa: FFFFD7F0
 Line ? Disp 100A2D84 Scalarizer Dsa: FFFFD850
 Line ? Disp 1003F6FC InvokeScalarizer Dsa: FFFFD8A0
 Line ? Disp 1003F9EC astidrvr Dsa: FFFFD8D0
 Line ? Disp 10002714 main Dsa: FFFFD930
 Line ? Disp 0FD01AE0 generic_start_main Dsa: FFFFD9F0
 --- End of call chain ---
1501-511 Compilation failed for file _evb_io.f.
make[1]: *** [evb_io.o] Error 217
make[1]: Leaving directory `/home/drfaust/apps/amber10/src/sander'
make: *** [parallel] Error 2

Do you have any idea on this?

Thanks in advance

Lee, Juyong
Lab of Computational biology
Ph.D. Candidate, Department of chemistry
Seoul National University, Seoul, Korea.

----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to To unsubscribe, send "unsubscribe amber" to