AMBER Archive (2008)

Subject: AMBER: Reference for rmsd

From: Francesco Pietra (chiendarret_at_yahoo.com)
Date: Mon Jan 28 2008 - 11:51:02 CST

I am looking for a general discussion about the choice of the reference frame
in calculating rmsd (frame 0, last frame, average, min energy, etc). I have
examined the tutorials to this regard.
Thanks
francesco pietra

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