AMBER Archive (2008)

Subject: Re: AMBER: antechamber run on charged system

From: David A. Case (case_at_scripps.edu)
Date: Wed Jan 23 2008 - 12:37:06 CST

On Wed, Jan 23, 2008, san_amber roy wrote:

> I tried to run antechamber on the system
> of total charge -1, using the command
> $AMBERHOME/exe/antechamber -i p_d.pdb -fi pdb -o p_d.prepin -fo prepi -c bcc
> -s 2 ,

Look at the "-nc" flag to antechamber.....dac

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