AMBER Archive (2008)

Subject: AMBER: About RAMD

From: Francesco Pietra (chiendarret_at_yahoo.com)
Date: Sat Jan 05 2008 - 04:39:44 CST

I was just informed from Professor Wade that RAMD at the moment can only be
implemented into Amber 8.

As I am most curious to try to follow the path of a ligand out of a protein
embedded in a membrane, is it possible to get Amber 8 (having a personal
license for Amber 9) and temporarily, for that computation, install it on the
same machine (dual opterons, shared memory) without unistalling Amber 9? Amber
9 was ifort/icc compiled, parallel support from OpenMPI 1.2.3.

Thanks

francesco pietra

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