AMBER Archive (2007)

Subject: Re: AMBER: amber9 leap installation error on sgi_altix

From: wei zhang (zhangwee_at_yahoo.com)
Date: Wed Nov 14 2007 - 10:05:26 CST

Dear David and Ross:

You are definetly right. it was because of the default
32 bit compliers. Everything works well with 64
version.
Thank you very much!

Best regards,

Wei

--- "David A. Case" <case_at_scripps.edu> wrote:

> On Tue, Nov 13, 2007, wei zhang wrote:
> >
> > I have some problem of installing amber9 on
> sgi_altix
> > machine. All the rest seems all right except Leap.
> >
> > I applied bugfix.all patch
> > compiler: l_cc_c_9.1.042 and l_fc_c_9.1.036
> > ./configure sgi_altix
> > make serial
> >
> > Below are the error message:
> >
> > ../Xmu/libXmu.a -L/usr/X11R6/lib64
> -L/usr/X11R6/lib
> > -lXt -lXext -lSM -lICE -lX11 -lm -lpthread
> > ld: skipping incompatible
> /usr/X11R6/lib64/libXt.so
>
> Weird. Neither of the two sgi_altix machines we
> have even have a
> /usr/X11R6/lib64 directory. Does your machine have
> a /usr/X11R6/lib
> directory?
>
> Unless you really need to run xleap on an altix, a
> workaround is to just
> give the "-noX11" flag to configure.
>
> If you want to track it down, figure out exactly how
> you are compiling the
> leap files. My guess is that you are compiling 32
> bit versions, then failing
> to link into what are 64-bit versions of the
> X-libraries.
>
> ...dac
>
>
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