AMBER Archive (2007)

Subject: Re: AMBER: Ca(2+) parameter

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On Thu, Aug 23, 2007, Qiang Zhong wrote:

> failed to find default bond length KA-KA, types KA-KA

Just a guess: make sure you have TER cards after every Ca atom in your pdb
file; otherwise, LEaP will think you have calcium-calcium bonds.

....dac

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• Next message: priya priya: "AMBER: Unable to open MDCRD file using vmd"
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• In reply to: Qiang Zhong: "AMBER: Ca(2+) parameter"
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