AMBER Archive (2007)

Subject: Re: AMBER: Force field for RNA with U-turn motif

From: Vlad Cojocaru (Vlad.Cojocaru_at_eml-r.villa-bosch.de)
Date: Wed Aug 22 2007 - 03:07:24 CDT


Hi Jenk,

I believe amber ff99 is what you want ...

Greets
vlad

Cenk Andac wrote:

> Dear Amber community,
>
> I was wondering if anyone could recommend a suitable force field for
> the anticodon loop region of t-RNA showing a U-turn motif in its
> X-Ray structure..
>
> my best regards,
>
> jenk
>
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Dr. Vlad Cojocaru

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