AMBER Archive (2007)

Subject: Re: AMBER: Problem while carrying out minimisation of drug molecule using sander

From: Anju Sharma (anju.020384_at_gmail.com)
Date: Tue Aug 07 2007 - 00:32:43 CDT

Hello Sir,
There is no such file (Unit 9) neither in my work directory nor in
amber8/exe directory, what should i do now.

On 8/6/07, David A. Case <case_at_scripps.edu> wrote:
>
> On Mon, Aug 06, 2007, Anju Sharma wrote:
>
> > [root_at_amber MTX]# /usr/local/amber8/exe/sander -O -i
> > /usr/local/Anju/Project/MTX/mtx_vac_init_min.in -o
> > /usr/local/Anju/Project/MTX/mtx_vac_init_min.out -c
> > /usr/local/Anju/Project/MTX/mtx_vac.inpcrd -p
> > /usr/local/Anju/Project/MTX/mtx_vac.prmtop -r
> > /usr/local/Anju/Project/MTX/mtx_vac_init_min.rst
> > forrtl: No such file or directory
> > forrtl: severe (29): file not found, unit 9, file
>
> Unit 9 is the file for the input coordinates. So you need to check if
> that
> file exists with the proper permissions and contents.
>
> ...dac
>
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber_at_scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
> 

-- 
Anju Sharma
Project Fellow,
NIT, Hamirpur (H.P.)

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu