AMBER Archive (2007)

Subject: Re: AMBER: Problem while carrying out minimisation of drug molecule using sander

From: David A. Case (case_at_scripps.edu)
Date: Mon Aug 06 2007 - 09:35:25 CDT

On Mon, Aug 06, 2007, Anju Sharma wrote:

> [root_at_amber MTX]# /usr/local/amber8/exe/sander -O -i
> /usr/local/Anju/Project/MTX/mtx_vac_init_min.in -o
> /usr/local/Anju/Project/MTX/mtx_vac_init_min.out -c
> /usr/local/Anju/Project/MTX/mtx_vac.inpcrd -p
> /usr/local/Anju/Project/MTX/mtx_vac.prmtop -r
> /usr/local/Anju/Project/MTX/mtx_vac_init_min.rst
> forrtl: No such file or directory
> forrtl: severe (29): file not found, unit 9, file

Unit 9 is the file for the input coordinates. So you need to check if that
file exists with the proper permissions and contents.

...dac

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