AMBER Archive (2007)

Subject: Re: AMBER: building water box with desired number of molecules

From: gurpreet singh (gps.iitm_at_gmail.com)
Date: Tue Jun 12 2007 - 04:09:10 CDT

have u check th leap module in Amber manual i think u will get some
information thr

On 6/12/07, Vijay Manickam Achari <vjrajamany_at_yahoo.com> wrote:
>
> Dear Amber Users..
>
> I intend to build a box of water. The water could be watbox126 or TIP3P.
> But I don't know how the build in amber with varying box size and number
> determining number of molecules. At the same time I also want to know how to
> change the number of water molecules and box sizes according to my needs.
>
> Can anyone help me...
>
> I really appreciate your help.
>
> Vijay
>
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