AMBER Archive (2007)

Subject: Re: AMBER: RESTRAINTMASK

From: Roberto Veiga (roberto.sapiens_at_gmail.com)
Date: Mon Jun 04 2007 - 15:09:23 CDT


It's OK now. Anyway, thanks.

[]s,

Roberto

2007/6/4, Sandeep Kaushik <sandy.thesmitten_at_gmail.com>:
>
> Hey Roberto,
> May be i am late and you might have sorted the problem urself..
> but anyways I think in your selection if you wanted to select the atoms
> given by you as
> @CZ,CD1,CE1,CD2,CE2,CG
>
> that are present in the residues given by
> :60,157,254,351
>
> if that's true (i.e
> . if all the atoms specified by you do exist in the residues specified)
> then I guess there should be no problem
> but since error is popping up so i guess you need to check whether there is any need for
>
> operators like
> "&" and "|" etc which imply AND, OR respectively...
>
> I hope this will solve ur problem.
> Adios.
> PS: I am also a learner so plz search AMBER manual for the details and
> real-correct usage..
>
>
> On 5/31/07, David A. Case <case_at_scripps.edu> wrote:
> >
> > On Thu, May 31, 2007, Roberto Veiga wrote:
> >
> > > Can anybody tell me what is wrong with this RESTRAINTMASK:
> > >
> > > :60,157,254,351_at_CZ,CD1,CE1,CD2,CE2,CG
> > >
> >
> > Maybe nothing.
> >
> > > Amber says to me that I'm trying to use too many values for NAMELIST
> > > variable.
> >
> > Please post your input file and the *exact* error message.
> >
> > ...thx...dac
> >
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>
>
>
> --
> sandy_thesmitten

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