AMBER Archive (2007)

Subject: Re: AMBER: RESTRAINTMASK

From: Sandeep Kaushik (sandy.thesmitten_at_gmail.com)
Date: Mon Jun 04 2007 - 00:38:21 CDT

Hey Roberto,
May be i am late and you might have sorted the problem urself..
but anyways I think in your selection if you wanted to select the atoms
given by you as
@CZ,CD1,CE1,CD2,CE2,CG

that are present in the residues given by
:60,157,254,351

if that's true (i.e
. if all the atoms specified by you do exist in the residues specified)
then I guess there should be no problem
but since error is popping up so i guess you need to check whether
there is any need for
operators like
"&" and "|" etc which imply AND, OR respectively...

I hope this will solve ur problem.
Adios.
PS: I am also a learner so plz search AMBER manual for the details and
real-correct usage..

On 5/31/07, David A. Case <case_at_scripps.edu> wrote:
>
> On Thu, May 31, 2007, Roberto Veiga wrote:
>
> > Can anybody tell me what is wrong with this RESTRAINTMASK:
> >
> > :60,157,254,351_at_CZ,CD1,CE1,CD2,CE2,CG
> >
>
> Maybe nothing.
>
> > Amber says to me that I'm trying to use too many values for NAMELIST
> > variable.
>
> Please post your input file and the *exact* error message.
>
> ...thx...dac
>
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber_at_scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
> 

-- 
sandy_thesmitten

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu